RNA–Protein interactions for RNA: ENST00000259216.4

CFC1-201, Transcript of cripto, FRL-1, cryptic family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFC1, Length 1,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFC1-201ENST00000259216 ALG1Q9BT22 464 aa23.24■■□□□ 1.31
CFC1-201ENST00000259216 TRIP12Q14669 1992 aaPredicted RBP23.23■■□□□ 1.31
CFC1-201ENST00000259216 ADAMTS3O15072 1205 aa23.23■■□□□ 1.31
CFC1-201ENST00000259216 PBX2P40425 430 aa23.23■■□□□ 1.31
CFC1-201ENST00000259216 CLK2P49760 499 aaKnown RBP23.23■■□□□ 1.31
CFC1-201ENST00000259216 NAPAP54920 295 aa23.23■■□□□ 1.31
CFC1-201ENST00000259216 ZNF200P98182 395 aaPredicted RBP23.23■■□□□ 1.31
CFC1-201ENST00000259216 TOB2Q14106 344 aaPredicted RBP23.23■■□□□ 1.31
CFC1-201ENST00000259216 PKN1Q16512 942 aa23.23■■□□□ 1.31
CFC1-201ENST00000259216 PFKFB3Q16875 520 aaPredicted RBP23.23■■□□□ 1.31
CFC1-201ENST00000259216 PBX4Q9BYU1 374 aa23.23■■□□□ 1.31
CFC1-201ENST00000259216 H3BRB1 525 aa23.22■■□□□ 1.31
CFC1-201ENST00000259216 RBAK-RBAKDNI3L0D1 243 aa23.22■■□□□ 1.31
CFC1-201ENST00000259216 PFKMP08237 780 aa23.22■■□□□ 1.31
CFC1-201ENST00000259216 PSMA5P28066 241 aa23.22■■□□□ 1.31
CFC1-201ENST00000259216 RFC2P35250 354 aa23.22■■□□□ 1.31
CFC1-201ENST00000259216 BFSP2Q13515 415 aa23.22■■□□□ 1.31
CFC1-201ENST00000259216 TRIM50Q86XT4 487 aa23.22■■□□□ 1.31
CFC1-201ENST00000259216 RPUSD2Q8IZ73 545 aaKnown RBP23.22■■□□□ 1.31
CFC1-201ENST00000259216 C7orf31Q8N865 590 aa23.22■■□□□ 1.31
CFC1-201ENST00000259216 CAGE1Q8TC20 777 aa23.22■■□□□ 1.31
CFC1-201ENST00000259216 TUT1Q9H6E5 874 aaKnown RBP23.22■■□□□ 1.31
CFC1-201ENST00000259216 CCDC196A0A1B0GTZ2 297 aa23.21■■□□□ 1.31
CFC1-201ENST00000259216 SPDYE3A6NKU9 549 aa23.21■■□□□ 1.31
CFC1-201ENST00000259216 PDIA3P30101 505 aaKnown RBP23.21■■□□□ 1.31
CFC1-201ENST00000259216 FGD1P98174 961 aa23.21■■□□□ 1.31
CFC1-201ENST00000259216 RUFY3Q7L099 469 aa23.21■■□□□ 1.31
CFC1-201ENST00000259216 NLRX1Q86UT6 975 aa23.21■■□□□ 1.31
CFC1-201ENST00000259216 AFAP1L1Q8TED9 768 aa23.21■■□□□ 1.31
CFC1-201ENST00000259216 CRYGNQ8WXF5 182 aa23.21■■□□□ 1.31
CFC1-201ENST00000259216 CDX2Q99626 313 aaPredicted RBP23.21■■□□□ 1.31
CFC1-201ENST00000259216 TM6SF1Q9BZW5 370 aa23.21■■□□□ 1.31
CFC1-201ENST00000259216 JADE2Q9NQC1 790 aa23.21■■□□□ 1.31
CFC1-201ENST00000259216 NOD1Q9Y239 953 aa23.21■■□□□ 1.31
CFC1-201ENST00000259216 ESYT2A0FGR8 921 aa23.2■■□□□ 1.3
CFC1-201ENST00000259216 SCG2P13521 617 aa23.2■■□□□ 1.3
CFC1-201ENST00000259216 ADCY7P51828 1080 aa23.2■■□□□ 1.3
CFC1-201ENST00000259216 PTK7Q13308 1070 aa23.2■■□□□ 1.3
CFC1-201ENST00000259216 DEFB128Q7Z7B8 93 aa23.2■■□□□ 1.3
CFC1-201ENST00000259216 SERINC5Q86VE9 423 aa23.2■■□□□ 1.3
CFC1-201ENST00000259216 CYP2W1Q8TAV3 490 aa23.2■■□□□ 1.3
CFC1-201ENST00000259216 PGBD1Q96JS3 809 aa23.2■■□□□ 1.3
CFC1-201ENST00000259216 ANO3Q9BYT9 981 aa23.2■■□□□ 1.3
CFC1-201ENST00000259216 TMEM260Q9NX78 707 aa23.2■■□□□ 1.3
CFC1-201ENST00000259216 NAP1L2Q9ULW6 460 aaPredicted RBP23.2■■□□□ 1.3
CFC1-201ENST00000259216 GBF1Q92538 1859 aa23.19■■□□□ 1.3
CFC1-201ENST00000259216 SMCO2A6NFE2 343 aa23.19■■□□□ 1.3
CFC1-201ENST00000259216 NOP56O00567 594 aaKnown RBP23.19■■□□□ 1.3
CFC1-201ENST00000259216 PRPF3O43395 683 aaKnown RBP23.19■■□□□ 1.3
CFC1-201ENST00000259216 CKBP12277 381 aa23.19■■□□□ 1.3
CFC1-201ENST00000259216 SREBF1P36956 1147 aa23.19■■□□□ 1.3
CFC1-201ENST00000259216 MBTPS1Q14703 1052 aa23.19■■□□□ 1.3
CFC1-201ENST00000259216 RETREG2Q8NC44 543 aa23.19■■□□□ 1.3
CFC1-201ENST00000259216 CDHR1Q96JP9 859 aa23.19■■□□□ 1.3
CFC1-201ENST00000259216 GSTTP1A0A1W2PQM5 241 aa23.18■■□□□ 1.3
CFC1-201ENST00000259216 FOSP01100 380 aaPredicted RBP23.18■■□□□ 1.3
CFC1-201ENST00000259216 SMIM10L2AP0DMW4 78 aa23.18■■□□□ 1.3
CFC1-201ENST00000259216 SMIM10L2BP0DMW5 78 aa23.18■■□□□ 1.3
CFC1-201ENST00000259216 SELPP16109 830 aa23.18■■□□□ 1.3
CFC1-201ENST00000259216 ADAM17P78536 824 aa23.18■■□□□ 1.3
CFC1-201ENST00000259216 MTMR1Q13613 665 aa23.18■■□□□ 1.3
CFC1-201ENST00000259216 LRRC8DQ7L1W4 858 aa23.18■■□□□ 1.3
CFC1-201ENST00000259216 GIMAP8Q8ND71 665 aaPredicted RBP23.18■■□□□ 1.3
CFC1-201ENST00000259216 PHKBQ93100 1093 aa23.18■■□□□ 1.3
CFC1-201ENST00000259216 TIFAQ96CG3 184 aa23.18■■□□□ 1.3
CFC1-201ENST00000259216 MXRA8Q9BRK3 442 aa23.18■■□□□ 1.3
CFC1-201ENST00000259216 ZMYND12Q9H0C1 365 aa23.18■■□□□ 1.3
CFC1-201ENST00000259216 MTIF3Q9H2K0 278 aaKnown RBP23.18■■□□□ 1.3
CFC1-201ENST00000259216 NCOA5Q9HCD5 579 aaKnown RBP23.18■■□□□ 1.3
CFC1-201ENST00000259216 YBX2Q9Y2T7 364 aaKnown RBP23.18■■□□□ 1.3
CFC1-201ENST00000259216 CDH23Q9H251 3354 aa23.18■■□□□ 1.3
CFC1-201ENST00000259216 NBNO60934 754 aa23.17■■□□□ 1.3
CFC1-201ENST00000259216 CXCL10P02778 98 aa23.17■■□□□ 1.3
CFC1-201ENST00000259216 IFNAR1P17181 557 aa23.17■■□□□ 1.3
CFC1-201ENST00000259216 AP3B2Q13367 1082 aa23.17■■□□□ 1.3
CFC1-201ENST00000259216 GRIN2CQ14957 1233 aa23.17■■□□□ 1.3
CFC1-201ENST00000259216 TCTN1Q2MV58 587 aa23.17■■□□□ 1.3
CFC1-201ENST00000259216 CCDC155Q8N6L0 562 aa23.17■■□□□ 1.3
CFC1-201ENST00000259216 UPF3BQ9BZI7 483 aaKnown RBP23.17■■□□□ 1.3
CFC1-201ENST00000259216 RNPEPQ9H4A4 650 aa23.17■■□□□ 1.3
CFC1-201ENST00000259216 KCNH7Q9NS40 1196 aa23.17■■□□□ 1.3
CFC1-201ENST00000259216 MAFGO15525 162 aa23.16■■□□□ 1.3
CFC1-201ENST00000259216 SP4Q02446 784 aa23.16■■□□□ 1.3
CFC1-201ENST00000259216 MYLIPQ8WY64 445 aa23.16■■□□□ 1.3
CFC1-201ENST00000259216 RNF26Q9BY78 433 aaPredicted RBP23.16■■□□□ 1.3
CFC1-201ENST00000259216 GLT8D2Q9H1C3 349 aa23.16■■□□□ 1.3
CFC1-201ENST00000259216 ZNF576Q9H609 170 aa23.16■■□□□ 1.3
CFC1-201ENST00000259216 SLC4A7Q9Y6M7 1214 aa23.16■■□□□ 1.3
CFC1-201ENST00000259216 CHD7Q9P2D1 2997 aa23.15■■□□□ 1.3
CFC1-201ENST00000259216 MEIS1O00470 390 aa23.15■■□□□ 1.3
CFC1-201ENST00000259216 PPFIA3O75145 1194 aa23.15■■□□□ 1.3
CFC1-201ENST00000259216 ARP10275 920 aa23.15■■□□□ 1.3
CFC1-201ENST00000259216 TCF7P36402 384 aaPredicted RBP23.15■■□□□ 1.3
CFC1-201ENST00000259216 CEP55Q53EZ4 464 aa23.15■■□□□ 1.3
CFC1-201ENST00000259216 ZNF618Q5T7W0 954 aa23.15■■□□□ 1.3
CFC1-201ENST00000259216 PCYT2Q99447 389 aa23.15■■□□□ 1.3
CFC1-201ENST00000259216 EHMT1Q9H9B1 1298 aa23.15■■□□□ 1.3
CFC1-201ENST00000259216 PKD2L1Q9P0L9 805 aa23.15■■□□□ 1.3
CFC1-201ENST00000259216 CYP46A1Q9Y6A2 500 aa23.15■■□□□ 1.3
CFC1-201ENST00000259216 PTPRSQ13332 1948 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms