RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 ZBED4O75132 1171 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 ARP10275 920 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 SETQ01105 290 aaPredicted RBP19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 LRRC41Q15345 812 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 FAM26FQ5R3K3 315 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 ILDR2Q71H61 639 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 CCDC65Q8IXS2 484 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 SYT2Q8N9I0 419 aaPredicted RBP19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 C12orf42Q96LP6 360 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 MXRA8Q9BRK3 442 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 PCDHA2Q9Y5H9 948 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 FRMD3A2A2Y4 597 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 LGALS16A8MUM7 142 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 VWA5AO00534 786 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 ARHGAP6O43182 974 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 STX10O60499 249 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 DDNO94850 711 aaPredicted RBP19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 FDX1P10109 184 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 CYP4A11Q02928 519 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 UBXN1Q04323 297 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 PABPC4Q13310 644 aaKnown RBP eCLIP19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 FAM114A1Q8IWE2 563 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 ZNF507Q8TCN5 953 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 ATG4CQ96DT6 458 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 PPP1R13BQ96KQ4 1090 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 CNOT6LQ96LI5 555 aaKnown RBP19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 PANX2Q96RD6 677 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 HSD17B14Q9BPX1 270 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 HOMER2Q9NSB8 354 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 RGL1Q9NZL6 768 aa19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 CTDP1Q9Y5B0 961 aaPredicted RBP19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.18■□□□□ 0.66
RABGGTA-201ENST00000216840 PITPNM2Q9BZ72 1349 aa19.17■□□□□ 0.66
RABGGTA-201ENST00000216840 GAS7O60861 476 aa19.17■□□□□ 0.66
RABGGTA-201ENST00000216840 GYPCP04921 128 aa19.17■□□□□ 0.66
RABGGTA-201ENST00000216840 HMGCS2P54868 508 aa19.17■□□□□ 0.66
RABGGTA-201ENST00000216840 CACNB1Q02641 598 aaPredicted RBP19.17■□□□□ 0.66
RABGGTA-201ENST00000216840 NOL9Q5SY16 702 aaKnown RBP19.17■□□□□ 0.66
RABGGTA-201ENST00000216840 SYTL5Q8TDW5 730 aaPredicted RBP19.17■□□□□ 0.66
RABGGTA-201ENST00000216840 CPLX3Q8WVH0 158 aa19.17■□□□□ 0.66
RABGGTA-201ENST00000216840 EEF2KMTQ96G04 330 aa19.17■□□□□ 0.66
RABGGTA-201ENST00000216840 WNK4Q96J92 1243 aa19.17■□□□□ 0.66
RABGGTA-201ENST00000216840 ZNF577Q9BSK1 485 aa19.17■□□□□ 0.66
RABGGTA-201ENST00000216840 MAP3K20Q9NYL2 800 aaKnown RBP19.17■□□□□ 0.66
RABGGTA-201ENST00000216840 PNMA2Q9UL42 364 aa19.17■□□□□ 0.66
RABGGTA-201ENST00000216840 C19orf81C9J6K1 198 aa19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 MFAP3LO75121 409 aa19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 CASP14P31944 242 aa19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 PTPN14Q15678 1187 aa19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 SUPT20HL1Q3ZLR7 823 aa19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 MYOCDQ8IZQ8 938 aa19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 KCTD17Q8N5Z5 321 aa19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 SAMD3Q8N6K7 520 aa19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 MB21D1Q8N884 522 aa19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 IL31RAQ8NI17 732 aa19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 TUBGCP2Q9BSJ2 902 aa19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 TUFT1Q9NNX1 390 aa19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 KRT18P05783 430 aaKnown RBP19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 TPM2P07951 284 aa19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 ITGB5P18084 799 aa19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 LRRC63Q05C16 580 aa19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 RAD51AP2Q09MP3 1159 aa19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 GIT2Q14161 759 aa19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 FOXR2Q6PJQ5 311 aa19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 FGFBP2Q9BYJ0 223 aa19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 FRMPD4Q14CM0 1322 aa19.16■□□□□ 0.66
RABGGTA-201ENST00000216840 CHMP2AO43633 222 aa19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 SLITRK3O94933 977 aa19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 EYA4O95677 639 aa19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 FXR1P51114 621 aaKnown RBP eCLIP19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 HERC4Q5GLZ8 1057 aaPredicted RBP19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 B3GNT9Q6UX72 402 aa19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 KRT26Q7Z3Y9 468 aa19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 DYDC2Q96IM9 177 aa19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 TRERF1Q96PN7 1200 aa19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 UNC45AQ9H3U1 944 aa19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 TBC1D7Q9P0N9 293 aa19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 WDR90Q96KV7 1748 aa19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 A0A1W2PQC6 194 aa19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 BCRP11274 1271 aa19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 PRKCSHP14314 528 aaPredicted RBP19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 RPS6P62753 249 aaKnown RBP19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 TRIM14Q14142 442 aa19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 CTTNQ14247 550 aaKnown RBP19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 NIPA1Q7RTP0 329 aa19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 CNGA4Q8IV77 575 aa19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 REPS2Q8NFH8 660 aa19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.15■□□□□ 0.661e-6■□□□□ 11.1
RABGGTA-201ENST00000216840 TEKT3Q9BXF9 490 aa19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 WDR11Q9BZH6 1224 aa19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 ADARB2Q9NS39 739 aaKnown RBP19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 RNF181Q9P0P0 153 aa19.15■□□□□ 0.66
RABGGTA-201ENST00000216840 UQCRHLA0A096LP55 91 aa19.14■□□□□ 0.65
RABGGTA-201ENST00000216840 B4DLN1 442 aa19.14■□□□□ 0.65
RABGGTA-201ENST00000216840 IPO5O00410 1097 aaKnown RBP19.14■□□□□ 0.65
RABGGTA-201ENST00000216840 CCP110O43303 1012 aa19.14■□□□□ 0.65
RABGGTA-201ENST00000216840 USP2O75604 605 aaPredicted RBP19.14■□□□□ 0.65
RABGGTA-201ENST00000216840 UQCRHP07919 91 aa19.14■□□□□ 0.65
RABGGTA-201ENST00000216840 DSG3P32926 999 aa19.14■□□□□ 0.65
RABGGTA-201ENST00000216840 MTIF2P46199 727 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms