RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W BPL1P48445 690 aaPredicted RBP3.7□□□□□ -1.82
ECM16YMR128W DAM1P53267 343 aa3.7□□□□□ -1.82
ECM16YMR128W IBD2P53892 351 aa3.7□□□□□ -1.82
ECM16YMR128W SSQ1Q05931 657 aaPredicted RBP3.7□□□□□ -1.82
ECM16YMR128W MDM36Q06820 579 aa3.7□□□□□ -1.82
ECM16YMR128W ACF2Q12168 779 aa3.7□□□□□ -1.82
ECM16YMR128W HOS1Q12214 470 aa3.7□□□□□ -1.82
ECM16YMR128W WTM1Q12363 437 aaKnown RBP3.7□□□□□ -1.82
ECM16YMR128W GTT2Q12390 233 aa3.7□□□□□ -1.82
ECM16YMR128W YLR149CQ99296 730 aa3.7□□□□□ -1.82
ECM16YMR128W COS2P0CX12 379 aa3.69□□□□□ -1.82
ECM16YMR128W COS3P0CX13 379 aa3.69□□□□□ -1.82
ECM16YMR128W STF2P16965 84 aa3.69□□□□□ -1.82
ECM16YMR128W KGD1P20967 1014 aaKnown RBP3.69□□□□□ -1.82
ECM16YMR128W PER1P25625 357 aa3.69□□□□□ -1.82
ECM16YMR128W FRE2P36033 711 aa3.69□□□□□ -1.82
ECM16YMR128W YHL012WP38709 493 aa3.69□□□□□ -1.82
ECM16YMR128W GIC1P38785 314 aa3.69□□□□□ -1.82
ECM16YMR128W IPT1P38954 527 aa3.69□□□□□ -1.82
ECM16YMR128W THO1P40040 218 aaKnown RBP3.69□□□□□ -1.82
ECM16YMR128W COS4P43542 379 aa3.69□□□□□ -1.82
ECM16YMR128W MPS3P47069 682 aa3.69□□□□□ -1.82
ECM16YMR128W BIR1P47134 954 aa3.69□□□□□ -1.82
ECM16YMR128W ALT2P52892 507 aa3.69□□□□□ -1.82
ECM16YMR128W SCW11P53189 542 aa3.69□□□□□ -1.82
ECM16YMR128W CPR8P53728 308 aa3.69□□□□□ -1.82
ECM16YMR128W YML108WQ03759 105 aa3.69□□□□□ -1.82
ECM16YMR128W SPO20Q04359 397 aa3.69□□□□□ -1.82
ECM16YMR128W PEX27Q08580 376 aa3.69□□□□□ -1.82
ECM16YMR128W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
ECM16YMR128W ENV7Q12003 364 aa3.69□□□□□ -1.82
ECM16YMR128W NUS1Q12063 375 aa3.69□□□□□ -1.82
ECM16YMR128W YOL159C-AQ3E769 90 aa3.69□□□□□ -1.82
ECM16YMR128W AFI1Q99222 893 aa3.69□□□□□ -1.82
ECM16YMR128W PTC6P25646 442 aa3.69□□□□□ -1.82
ECM16YMR128W GAC1P28006 793 aa3.69□□□□□ -1.82
ECM16YMR128W APE2P32454 952 aaKnown RBP3.69□□□□□ -1.82
ECM16YMR128W GSH1P32477 678 aa3.69□□□□□ -1.82
ECM16YMR128W SKT5P34226 696 aa3.69□□□□□ -1.82
ECM16YMR128W ZRT3P34240 503 aa3.69□□□□□ -1.82
ECM16YMR128W MRP21P38175 177 aa3.69□□□□□ -1.82
ECM16YMR128W ARN2P38724 620 aa3.69□□□□□ -1.82
ECM16YMR128W FCY21P40039 528 aa3.69□□□□□ -1.82
ECM16YMR128W ELO3P40319 345 aa3.69□□□□□ -1.82
ECM16YMR128W YPL107WQ02873 248 aa3.69□□□□□ -1.82
ECM16YMR128W DLT1Q04216 342 aa3.69□□□□□ -1.82
ECM16YMR128W BCH1Q05029 724 aa3.69□□□□□ -1.82
ECM16YMR128W HRD3Q05787 833 aa3.69□□□□□ -1.82
ECM16YMR128W YPS7Q06325 596 aa3.69□□□□□ -1.82
ECM16YMR128W RRP9Q06506 573 aaKnown RBP3.69□□□□□ -1.82
ECM16YMR128W ADE5,7P07244 802 aaKnown RBP3.69□□□□□ -1.82
ECM16YMR128W YIH1P25637 258 aa3.69□□□□□ -1.82
ECM16YMR128W CDC5P32562 705 aa3.69□□□□□ -1.82
ECM16YMR128W YKL100CP34248 587 aa3.69□□□□□ -1.82
ECM16YMR128W STB6P36085 766 aa3.69□□□□□ -1.82
ECM16YMR128W URA8P38627 578 aaPredicted RBP3.69□□□□□ -1.82
ECM16YMR128W YHR033WP38690 423 aa3.69□□□□□ -1.82
ECM16YMR128W SFB3P38810 929 aa3.69□□□□□ -1.82
ECM16YMR128W EDC3P39998 551 aaKnown RBP3.69□□□□□ -1.82
ECM16YMR128W GPP2P40106 250 aaKnown RBP3.69□□□□□ -1.82
ECM16YMR128W YGR210CP42942 411 aa3.69□□□□□ -1.82
ECM16YMR128W GCD14P46959 383 aaPredicted RBP3.69□□□□□ -1.82
ECM16YMR128W MNN11P46985 422 aaKnown RBP3.69□□□□□ -1.82
ECM16YMR128W JJJ3P47138 172 aa3.69□□□□□ -1.82
ECM16YMR128W BOL2P53082 120 aa3.69□□□□□ -1.82
ECM16YMR128W NUP100Q02629 959 aa3.69□□□□□ -1.82
ECM16YMR128W YML131WQ03102 365 aa3.69□□□□□ -1.82
ECM16YMR128W YMR010WQ03687 405 aa3.69□□□□□ -1.82
ECM16YMR128W RRP17Q04031 235 aaPredicted RBP3.69□□□□□ -1.82
ECM16YMR128W RCO1Q04779 684 aa3.69□□□□□ -1.82
ECM16YMR128W YOL019WQ08157 551 aa3.69□□□□□ -1.82
ECM16YMR128W HSP42Q12329 375 aa3.69□□□□□ -1.82
ECM16YMR128W SNF8Q12483 233 aa3.69□□□□□ -1.82
ECM16YMR128W APA1P16550 321 aaKnown RBP3.68□□□□□ -1.82
ECM16YMR128W PRP19P32523 503 aaKnown RBP3.68□□□□□ -1.82
ECM16YMR128W PRP21P32524 280 aaPredicted RBP3.68□□□□□ -1.82
ECM16YMR128W PPQ1P32945 549 aa3.68□□□□□ -1.82
ECM16YMR128W LRG1P35688 1017 aa3.68□□□□□ -1.82
ECM16YMR128W FUI1P38196 639 aa3.68□□□□□ -1.82
ECM16YMR128W MPM1P40364 252 aa3.68□□□□□ -1.82
ECM16YMR128W FKH2P41813 862 aa3.68□□□□□ -1.82
ECM16YMR128W TES1P41903 349 aaKnown RBP3.68□□□□□ -1.82
ECM16YMR128W ROK1P45818 564 aaPredicted RBP3.68□□□□□ -1.82
ECM16YMR128W ENT5Q03769 411 aaKnown RBP3.68□□□□□ -1.82
ECM16YMR128W ARP10Q04549 284 aa3.68□□□□□ -1.82
ECM16YMR128W BLS1Q06071 122 aa3.68□□□□□ -1.82
ECM16YMR128W YPR196WQ06595 470 aa3.68□□□□□ -1.82
ECM16YMR128W AAD4Q07747 329 aa3.68□□□□□ -1.82
ECM16YMR128W RBD2Q12270 262 aa3.68□□□□□ -1.82
ECM16YMR128W YPR071WQ12346 211 aa3.68□□□□□ -1.82
ECM16YMR128W FMP16Q12497 93 aa3.68□□□□□ -1.82
ECM16YMR128W HXK2P04807 486 aaKnown RBP3.68□□□□□ -1.82
ECM16YMR128W ATP1P07251 545 aaKnown RBP3.68□□□□□ -1.82
ECM16YMR128W MSF1P08425 469 aa3.68□□□□□ -1.82
ECM16YMR128W DBF2P22204 572 aa3.68□□□□□ -1.82
ECM16YMR128W PUP3P25451 205 aaKnown RBP3.68□□□□□ -1.82
ECM16YMR128W SFP1P32432 683 aa3.68□□□□□ -1.82
ECM16YMR128W HCS1P34243 683 aa3.68□□□□□ -1.82
ECM16YMR128W DHR2P36009 735 aaPredicted RBP3.68□□□□□ -1.82
ECM16YMR128W EFM1P38732 585 aa3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms