RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W YIP1P53039 248 aa3.42□□□□□ -1.86
UBC9YDL064W POP6P53218 158 aa3.42□□□□□ -1.86
UBC9YDL064W DSL1P53847 754 aa3.42□□□□□ -1.86
UBC9YDL064W SKO1Q02100 647 aa3.42□□□□□ -1.86
UBC9YDL064W DON1Q05610 365 aa3.42□□□□□ -1.86
UBC9YDL064W YTH1Q06102 208 aaPredicted RBP3.42□□□□□ -1.86
UBC9YDL064W ISA2Q12425 185 aa3.42□□□□□ -1.86
UBC9YDL064W SMC6Q12749 1114 aa3.42□□□□□ -1.86
UBC9YDL064W PHO2P07269 559 aa3.41□□□□□ -1.86
UBC9YDL064W YAR066WP0CX18 203 aa3.41□□□□□ -1.86
UBC9YDL064W YHR214WP0CX19 203 aa3.41□□□□□ -1.86
UBC9YDL064W SRV2P17555 526 aaKnown RBP3.41□□□□□ -1.86
UBC9YDL064W KRE2P27809 442 aa3.41□□□□□ -1.86
UBC9YDL064W ITR1P30605 584 aa3.41□□□□□ -1.86
UBC9YDL064W APE2P32454 952 aaKnown RBP3.41□□□□□ -1.86
UBC9YDL064W TFB1P32776 642 aa3.41□□□□□ -1.86
UBC9YDL064W REC114P32841 428 aa3.41□□□□□ -1.86
UBC9YDL064W RRT2P38332 387 aa3.41□□□□□ -1.86
UBC9YDL064W SER3P40054 469 aa3.41□□□□□ -1.86
UBC9YDL064W RSC1P53236 928 aa3.41□□□□□ -1.86
UBC9YDL064W PNG1Q02890 363 aa3.41□□□□□ -1.86
UBC9YDL064W ACL4Q03771 387 aa3.41□□□□□ -1.86
UBC9YDL064W MMR1Q06324 491 aa3.41□□□□□ -1.86
UBC9YDL064W PPT2Q12036 173 aa3.41□□□□□ -1.86
UBC9YDL064W YPR022CQ12139 1133 aa3.41□□□□□ -1.86
UBC9YDL064W TY1B-AO13527 1196 aaKnown RBP3.4□□□□□ -1.87
UBC9YDL064W SAM1P10659 382 aaKnown RBP3.4□□□□□ -1.87
UBC9YDL064W SAM2P19358 384 aaKnown RBP3.4□□□□□ -1.87
UBC9YDL064W URA4P20051 364 aa3.4□□□□□ -1.87
UBC9YDL064W SOR1P35497 357 aaKnown RBP3.4□□□□□ -1.87
UBC9YDL064W PIM1P36775 1133 aa3.4□□□□□ -1.87
UBC9YDL064W YJR011CP47086 261 aaPredicted RBP3.4□□□□□ -1.87
UBC9YDL064W OGG1P53397 376 aaPredicted RBP3.4□□□□□ -1.87
UBC9YDL064W ODC1Q03028 310 aa3.4□□□□□ -1.87
UBC9YDL064W SOR2Q07786 357 aa3.4□□□□□ -1.87
UBC9YDL064W DIS3Q08162 1001 aaKnown RBP3.4□□□□□ -1.87
UBC9YDL064W RKM1Q08961 583 aaPredicted RBP3.4□□□□□ -1.87
UBC9YDL064W ILV5P06168 395 aaKnown RBP3.39□□□□□ -1.87
UBC9YDL064W HIP1P06775 603 aa3.39□□□□□ -1.87
UBC9YDL064W SLM4P38247 162 aa3.39□□□□□ -1.87
UBC9YDL064W PCA1P38360 1216 aa3.39□□□□□ -1.87
UBC9YDL064W TIF5P38431 405 aaKnown RBP3.39□□□□□ -1.87
UBC9YDL064W SRP72P38688 640 aaKnown RBP3.39□□□□□ -1.87
UBC9YDL064W YHR218WP38899 603 aa3.39□□□□□ -1.87
UBC9YDL064W CAK1P43568 368 aaPredicted RBP3.39□□□□□ -1.87
UBC9YDL064W ECM27P47144 725 aa3.39□□□□□ -1.87
UBC9YDL064W RTT103Q05543 409 aa3.39□□□□□ -1.87
UBC9YDL064W THP3Q12049 470 aaKnown RBP3.39□□□□□ -1.87
UBC9YDL064W ORT1Q12375 292 aa3.39□□□□□ -1.87
UBC9YDL064W YCL021W-AQ96VH3 125 aa3.39□□□□□ -1.87
UBC9YDL064W COX3P00420 269 aa3.38□□□□□ -1.87
UBC9YDL064W CPR1P14832 162 aaKnown RBP3.38□□□□□ -1.87
UBC9YDL064W ARO3P14843 370 aaKnown RBP3.38□□□□□ -1.87
UBC9YDL064W CPR2P23285 205 aa3.38□□□□□ -1.87
UBC9YDL064W BRF1P29056 596 aa3.38□□□□□ -1.87
UBC9YDL064W APE3P37302 537 aaKnown RBP3.38□□□□□ -1.87
UBC9YDL064W OST1P41543 476 aaKnown RBP3.38□□□□□ -1.87
UBC9YDL064W IDP2P41939 412 aa3.38□□□□□ -1.87
UBC9YDL064W PHB2P50085 310 aa3.38□□□□□ -1.87
UBC9YDL064W FRE4P53746 719 aa3.38□□□□□ -1.87
UBC9YDL064W GOR1P53839 350 aa3.38□□□□□ -1.87
UBC9YDL064W OCA2P53949 197 aa3.38□□□□□ -1.87
UBC9YDL064W YMR130WQ04223 302 aa3.38□□□□□ -1.87
UBC9YDL064W DCS1Q06151 350 aa3.38□□□□□ -1.87
UBC9YDL064W YPL199CQ08954 240 aa3.38□□□□□ -1.87
UBC9YDL064W VPS54Q12071 889 aa3.38□□□□□ -1.87
UBC9YDL064W CLN1P20437 546 aa3.37□□□□□ -1.87
UBC9YDL064W TIP1P27654 210 aaPredicted RBP3.37□□□□□ -1.87
UBC9YDL064W MRP4P32902 394 aa3.37□□□□□ -1.87
UBC9YDL064W YHR054CP38780 354 aa3.37□□□□□ -1.87
UBC9YDL064W RRP4P38792 359 aaKnown RBP3.37□□□□□ -1.87
UBC9YDL064W LYS1P38998 373 aaRIP-Chip data3.37□□□□□ -1.87not detected
UBC9YDL064W MKT1P40850 830 aaKnown RBP3.37□□□□□ -1.87
UBC9YDL064W HMS2P47175 358 aa3.37□□□□□ -1.87
UBC9YDL064W RPT4P53549 437 aaKnown RBP3.37□□□□□ -1.87
UBC9YDL064W MSO1P53604 210 aaKnown RBP3.37□□□□□ -1.87
UBC9YDL064W HNT3Q08702 217 aa3.37□□□□□ -1.87
UBC9YDL064W HSP42Q12329 375 aa3.37□□□□□ -1.87
UBC9YDL064W YER078W-AQ3E7A2 54 aa3.37□□□□□ -1.87
UBC9YDL064W HIS4P00815 799 aaKnown RBP3.36□□□□□ -1.87
UBC9YDL064W LPD1P09624 499 aaKnown RBP3.36□□□□□ -1.87
UBC9YDL064W MDH1P17505 334 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
UBC9YDL064W CTR86P25355 563 aa3.36□□□□□ -1.87
UBC9YDL064W RGT1P32862 1170 aa3.36□□□□□ -1.87
UBC9YDL064W MMS4P38257 691 aa3.36□□□□□ -1.87
UBC9YDL064W YBR137WP38276 179 aa3.36□□□□□ -1.87
UBC9YDL064W CCT4P39078 528 aaKnown RBP3.36□□□□□ -1.87
UBC9YDL064W PHO86P46956 311 aa3.36□□□□□ -1.87
UBC9YDL064W YML6P51998 286 aa3.36□□□□□ -1.87
UBC9YDL064W CAF40P53829 373 aa3.36□□□□□ -1.87
UBC9YDL064W GYL1Q04322 720 aa3.36□□□□□ -1.87
UBC9YDL064W HEL2Q05580 639 aaKnown RBP3.36□□□□□ -1.87
UBC9YDL064W GPM3Q12326 303 aa3.36□□□□□ -1.87
UBC9YDL064W SCEIP03882 235 aa3.35□□□□□ -1.87
UBC9YDL064W PMR1P13586 950 aa3.35□□□□□ -1.87
UBC9YDL064W SMY1P32364 656 aaKnown RBP3.35□□□□□ -1.87
UBC9YDL064W NAT2P37293 288 aa3.35□□□□□ -1.87
UBC9YDL064W MST28P39552 234 aa3.35□□□□□ -1.87
UBC9YDL064W YIL067CP40514 678 aa3.35□□□□□ -1.87
UBC9YDL064W BOR1P53838 576 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms