RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C OGG1P53397 376 aaPredicted RBP3.81□□□□□ -1.8
PRP11YDL043C YMR114CQ04471 368 aaKnown RBP3.81□□□□□ -1.8
PRP11YDL043C TMN2Q04562 672 aa3.81□□□□□ -1.8
PRP11YDL043C RTN1Q04947 295 aaKnown RBP3.81□□□□□ -1.8
PRP11YDL043C KAP95Q06142 861 aaKnown RBP3.81□□□□□ -1.8
PRP11YDL043C ARO10Q06408 635 aa3.81□□□□□ -1.8
PRP11YDL043C YDL114WQ07530 308 aa3.81□□□□□ -1.8
PRP11YDL043C TLG2Q08144 397 aa3.81□□□□□ -1.8
PRP11YDL043C SIL1Q08199 421 aa3.81□□□□□ -1.8
PRP11YDL043C YOL159CQ08300 171 aa3.81□□□□□ -1.8
PRP11YDL043C ULA1Q12059 462 aa3.81□□□□□ -1.8
PRP11YDL043C TIP41Q12199 356 aa3.81□□□□□ -1.8
PRP11YDL043C SEY1Q99287 776 aa3.81□□□□□ -1.8
PRP11YDL043C CHO1P08456 276 aa3.8□□□□□ -1.8
PRP11YDL043C KRS1P15180 591 aaKnown RBP3.8□□□□□ -1.8
PRP11YDL043C FUS3P16892 353 aaKnown RBP3.8□□□□□ -1.8
PRP11YDL043C ART10P18634 518 aaKnown RBP3.8□□□□□ -1.8
PRP11YDL043C MAK32P23060 363 aa3.8□□□□□ -1.8
PRP11YDL043C MNE1P24720 663 aa3.8□□□□□ -1.8
PRP11YDL043C BOS1P25385 244 aa3.8□□□□□ -1.8
PRP11YDL043C YMC1P32331 307 aa3.8□□□□□ -1.8
PRP11YDL043C YBL010CP32788 280 aa3.8□□□□□ -1.8
PRP11YDL043C MDL1P33310 695 aa3.8□□□□□ -1.8
PRP11YDL043C SRL3P36167 246 aa3.8□□□□□ -1.8
PRP11YDL043C MOH1P38191 138 aa3.8□□□□□ -1.8
PRP11YDL043C MNL1P38888 796 aa3.8□□□□□ -1.8
PRP11YDL043C FCY21P40039 528 aa3.8□□□□□ -1.8
PRP11YDL043C YER186CP40101 306 aa3.8□□□□□ -1.8
PRP11YDL043C RTS2P40962 232 aa3.8□□□□□ -1.8
PRP11YDL043C PTR3P43606 678 aa3.8□□□□□ -1.8
PRP11YDL043C MDE1P47095 244 aa3.8□□□□□ -1.8
PRP11YDL043C BPL1P48445 690 aaPredicted RBP3.8□□□□□ -1.8
PRP11YDL043C PGA2P53903 129 aa3.8□□□□□ -1.8
PRP11YDL043C PEX25Q02969 394 aa3.8□□□□□ -1.8
PRP11YDL043C ARX1Q03862 593 aaKnown RBP3.8□□□□□ -1.8
PRP11YDL043C SEG1Q04279 960 aa3.8□□□□□ -1.8
PRP11YDL043C GIM5Q04493 163 aa3.8□□□□□ -1.8
PRP11YDL043C DCS1Q06151 350 aa3.8□□□□□ -1.8
PRP11YDL043C VTA1Q06263 330 aa3.8□□□□□ -1.8
PRP11YDL043C DSE3Q08729 430 aa3.8□□□□□ -1.8
PRP11YDL043C PAR32Q12515 295 aaKnown RBP3.8□□□□□ -1.8
PRP11YDL043C ISN1Q99312 450 aa3.8□□□□□ -1.8
PRP11YDL043C TAD3Q9URQ3 322 aa3.8□□□□□ -1.8
PRP11YDL043C TRM3Q07527 1436 aa3.79□□□□□ -1.8
PRP11YDL043C TUS1Q06412 1307 aa3.79□□□□□ -1.8
PRP11YDL043C RPN13O13563 156 aa3.79□□□□□ -1.8
PRP11YDL043C TUB1P09733 447 aaKnown RBP3.79□□□□□ -1.8
PRP11YDL043C MDH1P17505 334 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
PRP11YDL043C TYR1P20049 452 aa3.79□□□□□ -1.8
PRP11YDL043C RVS161P25343 265 aaKnown RBP3.79□□□□□ -1.8
PRP11YDL043C GSY2P27472 705 aa3.79□□□□□ -1.8
PRP11YDL043C YBL055CP34220 418 aaPredicted RBP3.79□□□□□ -1.8
PRP11YDL043C HEL1P36113 551 aa3.79□□□□□ -1.8
PRP11YDL043C NUP133P36161 1157 aa3.79□□□□□ -1.8
PRP11YDL043C FES1P38260 290 aa3.79□□□□□ -1.8
PRP11YDL043C ICS2P38284 255 aa3.79□□□□□ -1.8
PRP11YDL043C TSC10P38342 320 aa3.79□□□□□ -1.8
PRP11YDL043C RFC3P38629 340 aa3.79□□□□□ -1.8
PRP11YDL043C LIN1P38852 340 aaPredicted RBP3.79□□□□□ -1.8
PRP11YDL043C YEL020CP39994 560 aa3.79□□□□□ -1.8
PRP11YDL043C SCC4P40090 624 aa3.79□□□□□ -1.8
PRP11YDL043C CDC1P40986 491 aa3.79□□□□□ -1.8
PRP11YDL043C GLG2P47011 380 aa3.79□□□□□ -1.8
PRP11YDL043C YJL043WP47053 257 aa3.79□□□□□ -1.8
PRP11YDL043C RBL2P48606 106 aaKnown RBP3.79□□□□□ -1.8
PRP11YDL043C MRK1P50873 501 aa3.79□□□□□ -1.8
PRP11YDL043C ERG26P53199 349 aaKnown RBP3.79□□□□□ -1.8
PRP11YDL043C ESBP6P53918 673 aa3.79□□□□□ -1.8
PRP11YDL043C PRO2P54885 456 aaKnown RBP3.79□□□□□ -1.8
PRP11YDL043C OAZ1Q02803 292 aa3.79□□□□□ -1.8
PRP11YDL043C SRL4Q03085 281 aa3.79□□□□□ -1.8
PRP11YDL043C YMR178WQ03219 274 aaKnown RBP3.79□□□□□ -1.8
PRP11YDL043C PFA5Q03289 374 aa3.79□□□□□ -1.8
PRP11YDL043C TAF12Q03761 539 aa3.79□□□□□ -1.8
PRP11YDL043C RPN9Q04062 393 aaKnown RBP3.79□□□□□ -1.8
PRP11YDL043C GYL1Q04322 720 aa3.79□□□□□ -1.8
PRP11YDL043C ROY1Q04847 553 aa3.79□□□□□ -1.8
PRP11YDL043C FMP45Q07651 309 aa3.79□□□□□ -1.8
PRP11YDL043C CMS1Q07897 291 aaKnown RBP3.79□□□□□ -1.8
PRP11YDL043C TEN1Q07921 160 aa3.79□□□□□ -1.8
PRP11YDL043C YLR031WQ07978 186 aa3.79□□□□□ -1.8
PRP11YDL043C THP3Q12049 470 aaKnown RBP3.79□□□□□ -1.8
PRP11YDL043C DAS2Q12084 232 aa3.79□□□□□ -1.8
PRP11YDL043C AEP3Q12089 606 aa3.79□□□□□ -1.8
PRP11YDL043C HMS1Q12398 434 aa3.79□□□□□ -1.8
PRP11YDL043C PDH1Q12428 516 aaKnown RBP3.79□□□□□ -1.8
PRP11YDL043C AFI1Q99222 893 aa3.79□□□□□ -1.8
PRP11YDL043C HIS4P00815 799 aaKnown RBP3.78□□□□□ -1.8
PRP11YDL043C BI2P03873 423 aa3.78□□□□□ -1.8
PRP11YDL043C ADE5,7P07244 802 aaKnown RBP3.78□□□□□ -1.8
PRP11YDL043C RAP1P11938 827 aa3.78□□□□□ -1.8
PRP11YDL043C PRP16P15938 1071 aaPredicted RBP3.78□□□□□ -1.8
PRP11YDL043C UTR1P21373 530 aa3.78□□□□□ -1.8
PRP11YDL043C UBA1P22515 1024 aaKnown RBP3.78□□□□□ -1.8
PRP11YDL043C CPR2P23285 205 aa3.78□□□□□ -1.8
PRP11YDL043C GRR1P24814 1151 aa3.78□□□□□ -1.8
PRP11YDL043C SNT1P25357 1226 aa3.78□□□□□ -1.8
PRP11YDL043C ERV1P27882 189 aa3.78□□□□□ -1.8
PRP11YDL043C SAC1P32368 623 aaKnown RBP3.78□□□□□ -1.8
PRP11YDL043C LOS1P33418 1100 aaPredicted RBP3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms