RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C FMP42Q04991 504 aa3.94□□□□□ -1.78
PTA1YAL043C GIC2Q06648 383 aa3.94□□□□□ -1.78
PTA1YAL043C YLL007CQ07799 665 aa3.94□□□□□ -1.78
PTA1YAL043C UIP4Q08926 304 aa3.94□□□□□ -1.78
PTA1YAL043C SAM4Q08985 325 aaKnown RBP3.94□□□□□ -1.78
PTA1YAL043C YPR011CQ12251 326 aa3.94□□□□□ -1.78
PTA1YAL043C RBD2Q12270 262 aa3.94□□□□□ -1.78
PTA1YAL043C RGT2Q12300 763 aa3.94□□□□□ -1.78
PTA1YAL043C NDJ1Q12366 352 aa3.94□□□□□ -1.78
PTA1YAL043C YDR524C-BQ3E6R4 66 aa3.94□□□□□ -1.78
PTA1YAL043C REP1P03871 373 aa3.94□□□□□ -1.78
PTA1YAL043C TPK3P05986 398 aa3.94□□□□□ -1.78
PTA1YAL043C PRI2P20457 528 aa3.94□□□□□ -1.78
PTA1YAL043C DIT1P21623 536 aa3.94□□□□□ -1.78
PTA1YAL043C MKS1P34072 584 aa3.94□□□□□ -1.78
PTA1YAL043C CAF4P36130 643 aa3.94□□□□□ -1.78
PTA1YAL043C UIP5P36137 443 aa3.94□□□□□ -1.78
PTA1YAL043C SRL3P36167 246 aa3.94□□□□□ -1.78
PTA1YAL043C BSD2P38356 321 aa3.94□□□□□ -1.78
PTA1YAL043C PCL5P38794 229 aa3.94□□□□□ -1.78
PTA1YAL043C GYP8P43570 497 aa3.94□□□□□ -1.78
PTA1YAL043C RIM21P48565 533 aa3.94□□□□□ -1.78
PTA1YAL043C STR3P53101 465 aaKnown RBP3.94□□□□□ -1.78
PTA1YAL043C TWF1P53250 332 aa3.94□□□□□ -1.78
PTA1YAL043C AIM32Q04689 311 aa3.94□□□□□ -1.78
PTA1YAL043C NNT1Q05874 261 aa3.94□□□□□ -1.78
PTA1YAL043C YOL131WQ08270 108 aa3.94□□□□□ -1.78
PTA1YAL043C DCI1Q08558 271 aa3.94□□□□□ -1.78
PTA1YAL043C HER1Q12276 1246 aa3.94□□□□□ -1.78
PTA1YAL043C ATG34Q12292 412 aa3.94□□□□□ -1.78
PTA1YAL043C PEX11Q12462 236 aa3.94□□□□□ -1.78
PTA1YAL043C MHF1Q3E835 90 aa3.94□□□□□ -1.78
PTA1YAL043C YBR298C-AQ8TGK4 73 aa3.94□□□□□ -1.78
PTA1YAL043C GPH1P06738 902 aaKnown RBP3.93□□□□□ -1.78
PTA1YAL043C HAP2P06774 265 aa3.93□□□□□ -1.78
PTA1YAL043C RPC40P07703 335 aaKnown RBP3.93□□□□□ -1.78
PTA1YAL043C TOP3P13099 656 aa3.93□□□□□ -1.78
PTA1YAL043C AAT2P23542 418 aaKnown RBP3.93□□□□□ -1.78
PTA1YAL043C PGS1P25578 521 aa3.93□□□□□ -1.78
PTA1YAL043C PRP21P32524 280 aaPredicted RBP3.93□□□□□ -1.78
PTA1YAL043C RPN2P32565 945 aaKnown RBP3.93□□□□□ -1.78
PTA1YAL043C TOD6P34219 525 aa3.93□□□□□ -1.78
PTA1YAL043C CTF13P35203 478 aa3.93□□□□□ -1.78
PTA1YAL043C DHR2P36009 735 aaPredicted RBP3.93□□□□□ -1.78
PTA1YAL043C YPK3P38070 525 aa3.93□□□□□ -1.78
PTA1YAL043C YHR020WP38708 688 aaKnown RBP3.93□□□□□ -1.78
PTA1YAL043C YAP1801P38856 637 aa3.93□□□□□ -1.78
PTA1YAL043C MPT5P39016 859 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
PTA1YAL043C TIM17P39515 158 aa3.93□□□□□ -1.78
PTA1YAL043C GTS1P40956 396 aa3.93□□□□□ -1.78
PTA1YAL043C COG1P53079 417 aa3.93□□□□□ -1.78
PTA1YAL043C PRM8P53174 237 aa3.93□□□□□ -1.78
PTA1YAL043C HOL1P53389 586 aa3.93□□□□□ -1.78
PTA1YAL043C YLR346CQ06139 101 aa3.93□□□□□ -1.78
PTA1YAL043C YPR084WQ06821 456 aa3.93□□□□□ -1.78
PTA1YAL043C RKM1Q08961 583 aaPredicted RBP3.93□□□□□ -1.78
PTA1YAL043C YGK3Q12222 375 aaPredicted RBP3.93□□□□□ -1.78
PTA1YAL043C WTM1Q12363 437 aaKnown RBP3.93□□□□□ -1.78
PTA1YAL043C AHA1Q12449 350 aaKnown RBP3.93□□□□□ -1.78
PTA1YAL043C MED11Q99278 115 aa3.93□□□□□ -1.78
PTA1YAL043C MRP13P12686 339 aa3.92□□□□□ -1.78
PTA1YAL043C KSS1P14681 368 aa3.92□□□□□ -1.78
PTA1YAL043C KGD2P19262 463 aaPredicted RBP3.92□□□□□ -1.78
PTA1YAL043C OCA4P25366 362 aa3.92□□□□□ -1.78
PTA1YAL043C BUD23P25627 275 aaPredicted RBP3.92□□□□□ -1.78
PTA1YAL043C RSC6P25632 483 aa3.92□□□□□ -1.78
PTA1YAL043C POT1P27796 417 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
PTA1YAL043C VMA6P32366 345 aaKnown RBP3.92□□□□□ -1.78
PTA1YAL043C DSS4P32601 143 aa3.92□□□□□ -1.78
PTA1YAL043C SFA1P32771 386 aa3.92□□□□□ -1.78
PTA1YAL043C PTR2P32901 601 aa3.92□□□□□ -1.78
PTA1YAL043C GLG1P36143 616 aa3.92□□□□□ -1.78
PTA1YAL043C SLX1P38324 304 aa3.92□□□□□ -1.78
PTA1YAL043C INM1P38710 295 aa3.92□□□□□ -1.78
PTA1YAL043C YHR112CP38716 378 aa3.92□□□□□ -1.78
PTA1YAL043C YEL073CP39974 107 aa3.92□□□□□ -1.78
PTA1YAL043C JLP2P40206 208 aa3.92□□□□□ -1.78
PTA1YAL043C SSU1P41930 458 aa3.92□□□□□ -1.78
PTA1YAL043C YJL055WP47044 245 aa3.92□□□□□ -1.78
PTA1YAL043C SRB7P47822 140 aa3.92□□□□□ -1.78
PTA1YAL043C DIA3P52290 468 aa3.92□□□□□ -1.78
PTA1YAL043C MAL11P53048 616 aa3.92□□□□□ -1.78
PTA1YAL043C VPS73P53142 486 aaKnown RBP3.92□□□□□ -1.78
PTA1YAL043C ORM1P53224 222 aa3.92□□□□□ -1.78
PTA1YAL043C MSC1Q03104 513 aa3.92□□□□□ -1.78
PTA1YAL043C ARP10Q04549 284 aa3.92□□□□□ -1.78
PTA1YAL043C YDR124WQ04608 324 aa3.92□□□□□ -1.78
PTA1YAL043C IRC10Q08118 586 aa3.92□□□□□ -1.78
PTA1YAL043C UAF30Q08747 228 aa3.92□□□□□ -1.78
PTA1YAL043C NDD1Q08887 554 aa3.92□□□□□ -1.78
PTA1YAL043C LCB4Q12246 624 aa3.92□□□□□ -1.78
PTA1YAL043C YDR061WQ12298 539 aa3.92□□□□□ -1.78
PTA1YAL043C TRM10Q12400 293 aa3.92□□□□□ -1.78
PTA1YAL043C YOL159C-AQ3E769 90 aa3.92□□□□□ -1.78
PTA1YAL043C SIR3P06701 978 aa3.92□□□□□ -1.78
PTA1YAL043C DAP2P18962 818 aa3.92□□□□□ -1.78
PTA1YAL043C MRPL8P22353 238 aa3.92□□□□□ -1.78
PTA1YAL043C ITR1P30605 584 aa3.92□□□□□ -1.78
PTA1YAL043C PXA2P34230 853 aa3.92□□□□□ -1.78
PTA1YAL043C YHR045WP38775 560 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms