RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 FAM20AQ96MK3 541 aa14.64□□□□□ -0.07
PHGDH-218ENST00000641491 TEKT3Q9BXF9 490 aa14.64□□□□□ -0.07
PHGDH-218ENST00000641491 MLXIPQ9HAP2 919 aa14.64□□□□□ -0.07
PHGDH-218ENST00000641491 SPC25Q9HBM1 224 aa14.64□□□□□ -0.07
PHGDH-218ENST00000641491 TBC1D22BQ9NU19 505 aa14.64□□□□□ -0.07
PHGDH-218ENST00000641491 TFIP11Q9UBB9 837 aaKnown RBP14.64□□□□□ -0.07
PHGDH-218ENST00000641491 NRBP1Q9UHY1 535 aa14.64□□□□□ -0.07
PHGDH-218ENST00000641491 GABRQQ9UN88 632 aa14.64□□□□□ -0.07
PHGDH-218ENST00000641491 PCDHB6Q9Y5E3 794 aa14.64□□□□□ -0.07
PHGDH-218ENST00000641491 STK24Q9Y6E0 443 aa14.64□□□□□ -0.07
PHGDH-218ENST00000641491 CYP3A7-CYP3A51PA0A087WV96 503 aa14.63□□□□□ -0.07
PHGDH-218ENST00000641491 TBX3O15119 743 aa14.63□□□□□ -0.07
PHGDH-218ENST00000641491 SPTLC2O15270 562 aa14.63□□□□□ -0.07
PHGDH-218ENST00000641491 CYP3A7P24462 503 aa14.63□□□□□ -0.07
PHGDH-218ENST00000641491 EDNRBP24530 442 aa14.63□□□□□ -0.07
PHGDH-218ENST00000641491 PTGDRQ13258 359 aa14.63□□□□□ -0.07
PHGDH-218ENST00000641491 ACVR2BQ13705 512 aa14.63□□□□□ -0.07
PHGDH-218ENST00000641491 SLC9C1Q4G0N8 1177 aa14.63□□□□□ -0.07
PHGDH-218ENST00000641491 LRCH2Q5VUJ6 765 aa14.63□□□□□ -0.07
PHGDH-218ENST00000641491 MAMDC4Q6UXC1 1216 aa14.63□□□□□ -0.07
PHGDH-218ENST00000641491 FERMT2Q96AC1 680 aa14.63□□□□□ -0.07
PHGDH-218ENST00000641491 USP28Q96RU2 1077 aa14.63□□□□□ -0.07
PHGDH-218ENST00000641491 WDR11Q9BZH6 1224 aa14.63□□□□□ -0.07
PHGDH-218ENST00000641491 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.63□□□□□ -0.07
PHGDH-218ENST00000641491 GJD2Q9UKL4 321 aa14.63□□□□□ -0.07
PHGDH-218ENST00000641491 FAM184BQ9ULE4 1060 aa14.63□□□□□ -0.07
PHGDH-218ENST00000641491 ZDHHC9Q9Y397 364 aa14.63□□□□□ -0.07
PHGDH-218ENST00000641491 SAMM50Q9Y512 469 aa14.63□□□□□ -0.07
PHGDH-218ENST00000641491 UBIAD1Q9Y5Z9 338 aa14.63□□□□□ -0.07
PHGDH-218ENST00000641491 ZNF236Q9UL36 1845 aa14.63□□□□□ -0.07
PHGDH-218ENST00000641491 FAM86B1E9PN63 330 aa14.62□□□□□ -0.07
PHGDH-218ENST00000641491 IPO5O00410 1097 aaKnown RBP14.62□□□□□ -0.07
PHGDH-218ENST00000641491 ADAMTS3O15072 1205 aa14.62□□□□□ -0.07
PHGDH-218ENST00000641491 NKRFO15226 690 aaKnown RBP eCLIP14.62□□□□□ -0.07
PHGDH-218ENST00000641491 FAM86B2P0C5J1 330 aa14.62□□□□□ -0.07
PHGDH-218ENST00000641491 TXNP10599 105 aaKnown RBP14.62□□□□□ -0.07
PHGDH-218ENST00000641491 TGFB3P10600 412 aa14.62□□□□□ -0.07
PHGDH-218ENST00000641491 PTMSP20962 102 aa14.62□□□□□ -0.07
PHGDH-218ENST00000641491 CTGFP29279 349 aa14.62□□□□□ -0.07
PHGDH-218ENST00000641491 GRK4P32298 578 aa14.62□□□□□ -0.07
PHGDH-218ENST00000641491 CYP2C19P33261 490 aa14.62□□□□□ -0.07
PHGDH-218ENST00000641491 TXKP42681 527 aa14.62□□□□□ -0.07
PHGDH-218ENST00000641491 TPRNQ4KMQ1 711 aa14.62□□□□□ -0.07
PHGDH-218ENST00000641491 ARL6IP4Q66PJ3 421 aaKnown RBP14.62□□□□□ -0.07
PHGDH-218ENST00000641491 KRI1Q8N9T8 703 aaKnown RBP14.62□□□□□ -0.07
PHGDH-218ENST00000641491 PXYLP1Q8TE99 480 aa14.62□□□□□ -0.07
PHGDH-218ENST00000641491 USP6NLQ92738 828 aa14.62□□□□□ -0.07
PHGDH-218ENST00000641491 CDK5RAP3Q96JB5 506 aa14.62□□□□□ -0.07
PHGDH-218ENST00000641491 ZFP91Q96JP5 570 aaPredicted RBP14.62□□□□□ -0.07
PHGDH-218ENST00000641491 INPP4AQ96PE3 977 aaPredicted RBP14.62□□□□□ -0.07
PHGDH-218ENST00000641491 AP5M1Q9H0R1 490 aa14.62□□□□□ -0.07
PHGDH-218ENST00000641491 KCNH7Q9NS40 1196 aa14.62□□□□□ -0.07
PHGDH-218ENST00000641491 CLIC4Q9Y696 253 aa14.62□□□□□ -0.07
PHGDH-218ENST00000641491 POTEFA5A3E0 1075 aa14.61□□□□□ -0.07
PHGDH-218ENST00000641491 VWA3AA6NCI4 1184 aa14.61□□□□□ -0.07
PHGDH-218ENST00000641491 DDX39AO00148 427 aaKnown RBP14.61□□□□□ -0.07
PHGDH-218ENST00000641491 MEIS1O00470 390 aa14.61□□□□□ -0.07
PHGDH-218ENST00000641491 CHMP2AO43633 222 aa14.61□□□□□ -0.07
PHGDH-218ENST00000641491 SLC37A4O43826 429 aa14.61□□□□□ -0.07
PHGDH-218ENST00000641491 PRKAR2AP13861 404 aaKnown RBP14.61□□□□□ -0.07
PHGDH-218ENST00000641491 AKR1A1P14550 325 aa14.61□□□□□ -0.07
PHGDH-218ENST00000641491 ELNP15502 786 aa14.61□□□□□ -0.07
PHGDH-218ENST00000641491 PRPHP41219 470 aa14.61□□□□□ -0.07
PHGDH-218ENST00000641491 NASPP49321 788 aaPredicted RBP14.61□□□□□ -0.07
PHGDH-218ENST00000641491 MRPS9P82933 396 aaKnown RBP14.61□□□□□ -0.07
PHGDH-218ENST00000641491 KRT76Q01546 638 aa14.61□□□□□ -0.07
PHGDH-218ENST00000641491 CCL14Q16627 93 aa14.61□□□□□ -0.07
PHGDH-218ENST00000641491 HAUS3Q68CZ6 603 aa14.61□□□□□ -0.07
PHGDH-218ENST00000641491 IQSEC1Q6DN90 963 aa14.61□□□□□ -0.07
PHGDH-218ENST00000641491 NCAPH2Q6IBW4 605 aa14.61□□□□□ -0.07
PHGDH-218ENST00000641491 DHX37Q8IY37 1157 aaKnown RBP14.61□□□□□ -0.07
PHGDH-218ENST00000641491 MORC4Q8TE76 937 aa14.61□□□□□ -0.07
PHGDH-218ENST00000641491 AGO4Q9HCK5 861 aaKnown RBP14.61□□□□□ -0.07
PHGDH-218ENST00000641491 JPH1Q9HDC5 661 aaPredicted RBP14.61□□□□□ -0.07
PHGDH-218ENST00000641491 FAM13BQ9NYF5 915 aa14.61□□□□□ -0.07
PHGDH-218ENST00000641491 PCDHA12Q9UN75 941 aa14.61□□□□□ -0.07
PHGDH-218ENST00000641491 PTCH2Q9Y6C5 1203 aa14.61□□□□□ -0.07
PHGDH-218ENST00000641491 MSH4O15457 936 aa14.6□□□□□ -0.07
PHGDH-218ENST00000641491 PPP6R2O75170 966 aa14.6□□□□□ -0.07
PHGDH-218ENST00000641491 GH1P01241 217 aa14.6□□□□□ -0.07
PHGDH-218ENST00000641491 RARBP10826 455 aa14.6□□□□□ -0.07
PHGDH-218ENST00000641491 ITGB5P18084 799 aa14.6□□□□□ -0.07
PHGDH-218ENST00000641491 MARCKSP29966 332 aaPredicted RBP14.6□□□□□ -0.07
PHGDH-218ENST00000641491 TOB1P50616 345 aaPredicted RBP14.6□□□□□ -0.07
PHGDH-218ENST00000641491 ATP2C1P98194 919 aaPredicted RBP14.6□□□□□ -0.07
PHGDH-218ENST00000641491 SP4Q02446 784 aa14.6□□□□□ -0.07
PHGDH-218ENST00000641491 TNFAIP2Q03169 654 aa14.6□□□□□ -0.07
PHGDH-218ENST00000641491 SLC39A14Q15043 492 aa14.6□□□□□ -0.07
PHGDH-218ENST00000641491 OR6J1Q8NGC5 347 aa14.6□□□□□ -0.07
PHGDH-218ENST00000641491 TRIB2Q92519 343 aa14.6□□□□□ -0.07
PHGDH-218ENST00000641491 CCDC34Q96HJ3 373 aa14.6□□□□□ -0.07
PHGDH-218ENST00000641491 CCDC43Q96MW1 224 aaKnown RBP14.6□□□□□ -0.07
PHGDH-218ENST00000641491 RIT2Q99578 217 aa14.6□□□□□ -0.07
PHGDH-218ENST00000641491 FTOQ9C0B1 505 aaKnown RBP eCLIP14.6□□□□□ -0.07
PHGDH-218ENST00000641491 TTC12Q9H892 705 aaPredicted RBP14.6□□□□□ -0.07
PHGDH-218ENST00000641491 PTPN22Q9Y2R2 807 aa14.6□□□□□ -0.07
PHGDH-218ENST00000641491 DDX11L8A8MPP1 907 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 SPATA31C2B4DYI2 1134 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 ZEB2O60315 1214 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 MSCO60682 206 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms