RNA–Protein interactions for RNA: ENST00000624116.1

AC004943.3-201, humanhuman

BASIC

Gene AC004943.3, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.3-201ENST00000624116 ITGAVP06756 1048 aa7.13□□□□□ -1.27
AC004943.3-201ENST00000624116 ZNF28P17035 718 aa7.13□□□□□ -1.27
AC004943.3-201ENST00000624116 ATF4P18848 351 aaPredicted RBP7.13□□□□□ -1.27
AC004943.3-201ENST00000624116 ECI1P42126 302 aa7.13□□□□□ -1.27
AC004943.3-201ENST00000624116 ADAM9Q13443 819 aa7.13□□□□□ -1.27
AC004943.3-201ENST00000624116 EMC4Q5J8M3 183 aa7.13□□□□□ -1.27
AC004943.3-201ENST00000624116 C6orf15Q6UXA7 325 aaPredicted RBP7.13□□□□□ -1.27
AC004943.3-201ENST00000624116 STK32CQ86UX6 486 aa7.13□□□□□ -1.27
AC004943.3-201ENST00000624116 NLRP10Q86W26 655 aa7.13□□□□□ -1.27
AC004943.3-201ENST00000624116 CCDC103Q8IW40 242 aa7.13□□□□□ -1.27
AC004943.3-201ENST00000624116 PPIL6Q8IXY8 311 aa7.13□□□□□ -1.27
AC004943.3-201ENST00000624116 CHAMP1Q96JM3 812 aa7.13□□□□□ -1.27
AC004943.3-201ENST00000624116 TMEM209Q96SK2 561 aa7.13□□□□□ -1.27
AC004943.3-201ENST00000624116 ACBD3Q9H3P7 528 aa7.13□□□□□ -1.27
AC004943.3-201ENST00000624116 CAPN10Q9HC96 672 aa7.13□□□□□ -1.27
AC004943.3-201ENST00000624116 MATN3O15232 486 aa7.12□□□□□ -1.27
AC004943.3-201ENST00000624116 SUSD5O60279 629 aa7.12□□□□□ -1.27
AC004943.3-201ENST00000624116 DGKIO75912 1065 aa7.12□□□□□ -1.27
AC004943.3-201ENST00000624116 SSBP05455 408 aaKnown RBP eCLIP7.12□□□□□ -1.27
AC004943.3-201ENST00000624116 KCNJ6P48051 423 aa7.12□□□□□ -1.27
AC004943.3-201ENST00000624116 CYP4F3Q08477 520 aa7.12□□□□□ -1.27
AC004943.3-201ENST00000624116 STEAP3Q658P3 488 aa7.12□□□□□ -1.27
AC004943.3-201ENST00000624116 LARP1BQ659C4 914 aaKnown RBP7.12□□□□□ -1.27
AC004943.3-201ENST00000624116 FAM178BQ8IXR5 827 aa7.12□□□□□ -1.27
AC004943.3-201ENST00000624116 PHOSPHO1Q8TCT1 267 aa7.12□□□□□ -1.27
AC004943.3-201ENST00000624116 KISS1RQ969F8 398 aaPredicted RBP7.12□□□□□ -1.27
AC004943.3-201ENST00000624116 CDK5RAP1Q96SZ6 601 aaKnown RBP7.12□□□□□ -1.27
AC004943.3-201ENST00000624116 SYT3Q9BQG1 590 aa7.12□□□□□ -1.27
AC004943.3-201ENST00000624116 KRTAP17-1Q9BYP8 105 aa7.12□□□□□ -1.27
AC004943.3-201ENST00000624116 KRTAP3-1Q9BYR8 98 aa7.12□□□□□ -1.27
AC004943.3-201ENST00000624116 TMEM168Q9H0V1 697 aa7.12□□□□□ -1.27
AC004943.3-201ENST00000624116 EPB41L1Q9H4G0 881 aa7.12□□□□□ -1.27
AC004943.3-201ENST00000624116 AGRPO00253 132 aa7.11□□□□□ -1.27
AC004943.3-201ENST00000624116 SMAD7O15105 426 aaKnown RBP7.11□□□□□ -1.27
AC004943.3-201ENST00000624116 RCBTB1Q8NDN9 531 aa7.11□□□□□ -1.27
AC004943.3-201ENST00000624116 EPN3Q9H201 632 aa7.11□□□□□ -1.27
AC004943.3-201ENST00000624116 SRRDQ9UH36 339 aa7.11□□□□□ -1.27
AC004943.3-201ENST00000624116 PCDHA2Q9Y5H9 948 aa7.11□□□□□ -1.27
AC004943.3-201ENST00000624116 GFRA1P56159 465 aa7.1□□□□□ -1.27
AC004943.3-201ENST00000624116 FXNQ16595 210 aa7.1□□□□□ -1.27
AC004943.3-201ENST00000624116 CYP4F22Q6NT55 531 aa7.1□□□□□ -1.27
AC004943.3-201ENST00000624116 TEPPQ6URK8 271 aa7.1□□□□□ -1.27
AC004943.3-201ENST00000624116 KREMEN2Q8NCW0 462 aa7.1□□□□□ -1.27
AC004943.3-201ENST00000624116 YTHDC1Q96MU7 727 aaKnown RBP7.1□□□□□ -1.27
AC004943.3-201ENST00000624116 SSBP3Q9BWW4 388 aaPredicted RBP7.1□□□□□ -1.27
AC004943.3-201ENST00000624116 LGR4Q9BXB1 951 aa7.1□□□□□ -1.27
AC004943.3-201ENST00000624116 CLDND1Q9NY35 253 aa7.1□□□□□ -1.27
AC004943.3-201ENST00000624116 FTSJ1Q9UET6 329 aa7.1□□□□□ -1.27
AC004943.3-201ENST00000624116 TMEFF2Q9UIK5 374 aaPredicted RBP7.1□□□□□ -1.27
AC004943.3-201ENST00000624116 TCRBV5S2A0A599 114 aa7.09□□□□□ -1.27
AC004943.3-201ENST00000624116 KRIT1O00522 736 aa7.09□□□□□ -1.27
AC004943.3-201ENST00000624116 TBX1O43435 398 aa7.09□□□□□ -1.27
AC004943.3-201ENST00000624116 B4GALT3O60512 393 aa7.09□□□□□ -1.27
AC004943.3-201ENST00000624116 TADA3O75528 432 aa7.09□□□□□ -1.27
AC004943.3-201ENST00000624116 DDAH1O94760 285 aa7.09□□□□□ -1.27
AC004943.3-201ENST00000624116 IL13P35225 146 aa7.09□□□□□ -1.27
AC004943.3-201ENST00000624116 RANGAP1P46060 587 aaPredicted RBP7.09□□□□□ -1.27
AC004943.3-201ENST00000624116 GNL2Q13823 731 aaKnown RBP7.09□□□□□ -1.27
AC004943.3-201ENST00000624116 TRIM48Q8IWZ4 208 aa7.09□□□□□ -1.27
AC004943.3-201ENST00000624116 SMOC1Q9H4F8 434 aa7.09□□□□□ -1.27
AC004943.3-201ENST00000624116 PRKAG3Q9UGI9 489 aa7.09□□□□□ -1.27
AC004943.3-201ENST00000624116 TSC22D4Q9Y3Q8 395 aa7.09□□□□□ -1.27
AC004943.3-201ENST00000624116 CCDC9Q9Y3X0 531 aaKnown RBP7.09□□□□□ -1.27
AC004943.3-201ENST00000624116 NPEPPSL1A6NEC2 478 aa7.08□□□□□ -1.28
AC004943.3-201ENST00000624116 ARHGEF18Q6ZSZ5 1173 aa7.08□□□□□ -1.28
AC004943.3-201ENST00000624116 EEPD1Q7L9B9 569 aa7.08□□□□□ -1.28
AC004943.3-201ENST00000624116 ARRDC4Q8NCT1 418 aa7.08□□□□□ -1.28
AC004943.3-201ENST00000624116 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.08□□□□□ -1.28
AC004943.3-201ENST00000624116 ZSWIM3Q96MP5 696 aa7.08□□□□□ -1.28
AC004943.3-201ENST00000624116 BARX1Q9HBU1 254 aaPredicted RBP7.08□□□□□ -1.28
AC004943.3-201ENST00000624116 HSPBP1Q9NZL4 362 aa7.08□□□□□ -1.28
AC004943.3-201ENST00000624116 MYOTQ9UBF9 498 aa7.08□□□□□ -1.28
AC004943.3-201ENST00000624116 AKAP8O43823 692 aaKnown RBP7.07□□□□□ -1.28
AC004943.3-201ENST00000624116 EPHB4P54760 987 aa7.07□□□□□ -1.28
AC004943.3-201ENST00000624116 PRSS53Q2L4Q9 553 aa7.07□□□□□ -1.28
AC004943.3-201ENST00000624116 PKN3Q6P5Z2 889 aa7.07□□□□□ -1.28
AC004943.3-201ENST00000624116 LIMS2Q7Z4I7 341 aa7.07□□□□□ -1.28
AC004943.3-201ENST00000624116 CIR1Q86X95 450 aaPredicted RBP7.07□□□□□ -1.28
AC004943.3-201ENST00000624116 KLHL36Q8N4N3 616 aa7.07□□□□□ -1.28
AC004943.3-201ENST00000624116 TMEM145Q8NBT3 493 aa7.07□□□□□ -1.28
AC004943.3-201ENST00000624116 KCTD13Q8WZ19 329 aa7.07□□□□□ -1.28
AC004943.3-201ENST00000624116 JADE2Q9NQC1 790 aa7.07□□□□□ -1.28
AC004943.3-201ENST00000624116 ST6GALNAC2Q9UJ37 374 aa7.07□□□□□ -1.28
AC004943.3-201ENST00000624116 FBXL7Q9UJT9 491 aa7.07□□□□□ -1.28
AC004943.3-201ENST00000624116 CROTQ9UKG9 612 aa7.07□□□□□ -1.28
AC004943.3-201ENST00000624116 NUB1Q9Y5A7 615 aa7.07□□□□□ -1.28
AC004943.3-201ENST00000624116 MRVI1Q9Y6F6 885 aa7.07□□□□□ -1.28
AC004943.3-201ENST00000624116 PPP2CBP62714 309 aa7.06□□□□□ -1.28
AC004943.3-201ENST00000624116 PPP2CAP67775 309 aa7.06□□□□□ -1.28
AC004943.3-201ENST00000624116 MAP4K2Q12851 820 aa7.06□□□□□ -1.28
AC004943.3-201ENST00000624116 TTLL11Q8NHH1 800 aa7.06□□□□□ -1.28
AC004943.3-201ENST00000624116 PPP4R1LQ9P1A2 415 aa7.06□□□□□ -1.28
AC004943.3-201ENST00000624116 KIAA1522Q9P206 1035 aaPredicted RBP7.06□□□□□ -1.28
AC004943.3-201ENST00000624116 NPFFR2Q9Y5X5 522 aa7.06□□□□□ -1.28
AC004943.3-201ENST00000624116 ARNTLO00327 626 aa7.05□□□□□ -1.28
AC004943.3-201ENST00000624116 SF1Q15637 639 aaKnown RBP7.05□□□□□ -1.28
AC004943.3-201ENST00000624116 SLFN13Q68D06 897 aa7.05□□□□□ -1.28
AC004943.3-201ENST00000624116 TRMT10BQ6PF06 316 aaKnown RBP7.05□□□□□ -1.28
AC004943.3-201ENST00000624116 KBTBD2Q8IY47 623 aa7.05□□□□□ -1.28
AC004943.3-201ENST00000624116 MBD6Q96DN6 1003 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms