RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 PRO3102Q9H379 93 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 COPRSQ9NQ92 184 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 PAK6Q9NQU5 681 aaPredicted RBP6.82□□□□□ -1.32
DNMT1-220ENST00000589351 TMOD4Q9NZQ9 345 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 KIAA1522Q9P206 1035 aaPredicted RBP6.82□□□□□ -1.32
DNMT1-220ENST00000589351 TFIP11Q9UBB9 837 aaKnown RBP6.82□□□□□ -1.32
DNMT1-220ENST00000589351 STAP2Q9UGK3 403 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 HERC5Q9UII4 1024 aaKnown RBP6.82□□□□□ -1.32
DNMT1-220ENST00000589351 ZSWIM8A7E2V4 1837 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 MROH7-TTC4A0A0A0MT08 1334 aa6.81□□□□□ -1.32
DNMT1-220ENST00000589351 GPR75-ASB3A0A0A6YYF3 556 aa6.81□□□□□ -1.32
DNMT1-220ENST00000589351 FSCN2O14926 492 aa6.81□□□□□ -1.32
DNMT1-220ENST00000589351 ADAM11O75078 769 aa6.81□□□□□ -1.32
DNMT1-220ENST00000589351 CDC27P30260 824 aa6.81□□□□□ -1.32
DNMT1-220ENST00000589351 CAP2P40123 477 aa6.81□□□□□ -1.32
DNMT1-220ENST00000589351 IRX3P78415 501 aaPredicted RBP6.81□□□□□ -1.32
DNMT1-220ENST00000589351 MECOMQ03112 1051 aa6.81□□□□□ -1.32
DNMT1-220ENST00000589351 PDE3AQ14432 1141 aa6.81□□□□□ -1.32
DNMT1-220ENST00000589351 CEP135Q66GS9 1140 aa6.81□□□□□ -1.32
DNMT1-220ENST00000589351 ATF7IPQ6VMQ6 1270 aa6.81□□□□□ -1.32
DNMT1-220ENST00000589351 SND1Q7KZF4 910 aaKnown RBP eCLIP6.81□□□□□ -1.32
DNMT1-220ENST00000589351 FOXP4Q8IVH2 680 aaPredicted RBP6.81□□□□□ -1.32
DNMT1-220ENST00000589351 VTI1AQ96AJ9 217 aa6.81□□□□□ -1.32
DNMT1-220ENST00000589351 C11orf49Q9H6J7 331 aa6.81□□□□□ -1.32
DNMT1-220ENST00000589351 GINM1Q9NU53 330 aa6.81□□□□□ -1.32
DNMT1-220ENST00000589351 RAI14Q9P0K7 980 aa6.81□□□□□ -1.32
DNMT1-220ENST00000589351 LRP2BPQ9P2M1 347 aa6.81□□□□□ -1.32
DNMT1-220ENST00000589351 MYH2Q9UKX2 1941 aa6.81□□□□□ -1.32
DNMT1-220ENST00000589351 BRCA2P51587 3418 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 A0A1B0GUL7 405 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 RBM47A0AV96 593 aaKnown RBP6.8□□□□□ -1.32
DNMT1-220ENST00000589351 CARNS1A5YM72 827 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 C19orf81C9J6K1 198 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 SART1O43290 800 aaKnown RBP6.8□□□□□ -1.32
DNMT1-220ENST00000589351 GLRX3O76003 335 aaKnown RBP6.8□□□□□ -1.32
DNMT1-220ENST00000589351 ASNSP08243 561 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 UQCRFS1P1P0C7P4 283 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 WEE1P30291 646 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 MAPK4P31152 587 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 PREPP48147 710 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 HMGCS2P54868 508 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 SLFN5Q08AF3 891 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 G3BP1Q13283 466 aaKnown RBP eCLIP6.8□□□□□ -1.32
DNMT1-220ENST00000589351 RASGRF1Q13972 1273 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 TREML2Q5T2D2 321 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 CBLL1Q75N03 491 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 C7orf61Q8IZ16 206 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 CRACR2BQ8N4Y2 399 aaPredicted RBP6.8□□□□□ -1.32
DNMT1-220ENST00000589351 GTF3C2Q8WUA4 911 aaPredicted RBP6.8□□□□□ -1.32
DNMT1-220ENST00000589351 SOCS4Q8WXH5 440 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 MFSD14AQ96MC6 490 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 GDF15Q99988 308 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 ASCC2Q9H1I8 757 aaPredicted RBP6.8□□□□□ -1.32
DNMT1-220ENST00000589351 DDX4Q9NQI0 724 aaKnown RBP6.8□□□□□ -1.32
DNMT1-220ENST00000589351 PI4KBQ9UBF8 816 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 PA2G4Q9UQ80 394 aaKnown RBP6.8□□□□□ -1.32
DNMT1-220ENST00000589351 MAFBQ9Y5Q3 323 aaPredicted RBP6.8□□□□□ -1.32
DNMT1-220ENST00000589351 IVNS1ABPQ9Y6Y0 642 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 DOCK2Q92608 1830 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 ATRNL1Q5VV63 1379 aa6.8□□□□□ -1.32
DNMT1-220ENST00000589351 ZNF521Q96K83 1311 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 USP17L10C9JJH3 530 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 IPO8O15397 1037 aaKnown RBP6.79□□□□□ -1.32
DNMT1-220ENST00000589351 SRGAP3O43295 1099 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 XRCC5P13010 732 aaKnown RBP6.79□□□□□ -1.32
DNMT1-220ENST00000589351 CYP2B6P20813 491 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 ADORA1P30542 326 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 HOXA7P31268 230 aaPredicted RBP6.79□□□□□ -1.32
DNMT1-220ENST00000589351 BACE1P56817 501 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 CCNA1P78396 465 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 PDE4CQ08493 712 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 TFCP2Q12800 502 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 TRIP4Q15650 581 aaPredicted RBP6.79□□□□□ -1.32
DNMT1-220ENST00000589351 LRIT3Q3SXY7 679 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 CCDC158Q5M9N0 1113 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 NFXL1Q6ZNB6 911 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 ANKMY2Q8IV38 441 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 TEX11Q8IYF3 940 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 TDHQ8IZJ6 230 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 DEFB123Q8N688 67 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 SPATA5Q8NB90 893 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 KLHL23Q8NBE8 558 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 GPRC5AQ8NFJ5 357 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 NSUN4Q96CB9 384 aaKnown RBP6.79□□□□□ -1.32
DNMT1-220ENST00000589351 KLHDC7BQ96G42 594 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 WDR18Q9BV38 432 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 MORF4L1Q9UBU8 362 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 GJD2Q9UKL4 321 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 OGDHLQ9ULD0 1010 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 ZMYND8Q9ULU4 1186 aaPredicted RBP6.79□□□□□ -1.32
DNMT1-220ENST00000589351 NOB1Q9ULX3 412 aaKnown RBP6.79□□□□□ -1.32
DNMT1-220ENST00000589351 DOCK1Q14185 1865 aa6.79□□□□□ -1.32
DNMT1-220ENST00000589351 SMARCA5O60264 1052 aaPredicted RBP6.78□□□□□ -1.32
DNMT1-220ENST00000589351 SMNDC1O75940 238 aaKnown RBP eCLIP6.78□□□□□ -1.32
DNMT1-220ENST00000589351 HLA-DOAP06340 250 aa6.78□□□□□ -1.32
DNMT1-220ENST00000589351 ZKSCAN1P17029 563 aaPredicted RBP6.78□□□□□ -1.32
DNMT1-220ENST00000589351 EPHA1P21709 976 aa6.78□□□□□ -1.32
DNMT1-220ENST00000589351 RGS2P41220 211 aa6.78□□□□□ -1.32
DNMT1-220ENST00000589351 RHBDL3P58872 404 aa6.78□□□□□ -1.32
DNMT1-220ENST00000589351 HERVK_113P62684 666 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms