RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 PTK7Q13308 1070 aa11.97□□□□□ -0.49
GGA3-219ENST00000584550 HIC1Q14526 733 aa11.97□□□□□ -0.49
GGA3-219ENST00000584550 MFSD10Q14728 455 aa11.97□□□□□ -0.49
GGA3-219ENST00000584550 SMAD2Q15796 467 aaKnown RBP11.97□□□□□ -0.49
GGA3-219ENST00000584550 DGKDQ16760 1214 aa11.97□□□□□ -0.49
GGA3-219ENST00000584550 KIAA0753Q2KHM9 967 aa11.97□□□□□ -0.49
GGA3-219ENST00000584550 TRIM71Q2Q1W2 868 aaKnown RBP11.97□□□□□ -0.49
GGA3-219ENST00000584550 USH1GQ495M9 461 aa11.97□□□□□ -0.49
GGA3-219ENST00000584550 HERC4Q5GLZ8 1057 aaPredicted RBP11.97□□□□□ -0.49
GGA3-219ENST00000584550 PLEKHM2Q8IWE5 1019 aa11.97□□□□□ -0.49
GGA3-219ENST00000584550 DHX37Q8IY37 1157 aaKnown RBP11.97□□□□□ -0.49
GGA3-219ENST00000584550 DNERQ8NFT8 737 aa11.97□□□□□ -0.49
GGA3-219ENST00000584550 SP7Q8TDD2 431 aaPredicted RBP11.97□□□□□ -0.49
GGA3-219ENST00000584550 EDAQ92838 391 aa11.97□□□□□ -0.49
GGA3-219ENST00000584550 MICAL3Q7RTP6 2002 aa11.97□□□□□ -0.49
GGA3-219ENST00000584550 NLRC5Q86WI3 1866 aa11.97□□□□□ -0.49
GGA3-219ENST00000584550 TMEM221A6NGB7 291 aa11.96□□□□□ -0.49
GGA3-219ENST00000584550 RSPH10B2B2RC85 870 aa11.96□□□□□ -0.49
GGA3-219ENST00000584550 B4DLN1 442 aa11.96□□□□□ -0.49
GGA3-219ENST00000584550 M0R296 226 aa11.96□□□□□ -0.49
GGA3-219ENST00000584550 STXBP3O00186 592 aa11.96□□□□□ -0.49
GGA3-219ENST00000584550 MBTPS2O43462 519 aa11.96□□□□□ -0.49
GGA3-219ENST00000584550 GFRA3O60609 400 aa11.96□□□□□ -0.49
GGA3-219ENST00000584550 RSPH10BP0C881 870 aa11.96□□□□□ -0.49
GGA3-219ENST00000584550 MRPL12P52815 198 aaKnown RBP11.96□□□□□ -0.49
GGA3-219ENST00000584550 TCF15Q12870 199 aa11.96□□□□□ -0.49
GGA3-219ENST00000584550 PPP4R3BQ5MIZ7 849 aa11.96□□□□□ -0.49
GGA3-219ENST00000584550 BTNL9Q6UXG8 535 aa11.96□□□□□ -0.49
GGA3-219ENST00000584550 FBXO11Q86XK2 927 aa11.96□□□□□ -0.49
GGA3-219ENST00000584550 TBC1D5Q92609 795 aa11.96□□□□□ -0.49
GGA3-219ENST00000584550 RILPL2Q969X0 211 aa11.96□□□□□ -0.49
GGA3-219ENST00000584550 EVI5LQ96CN4 794 aa11.96□□□□□ -0.49
GGA3-219ENST00000584550 SAMD11Q96NU1 681 aa11.96□□□□□ -0.49
GGA3-219ENST00000584550 OSBPL7Q9BZF2 842 aa11.96□□□□□ -0.49
GGA3-219ENST00000584550 MYO7AQ13402 2215 aa11.96□□□□□ -0.49
GGA3-219ENST00000584550 TECTAO75443 2155 aa11.96□□□□□ -0.5
GGA3-219ENST00000584550 ATG2AQ2TAZ0 1938 aa11.96□□□□□ -0.5
GGA3-219ENST00000584550 LINC01565O15544 149 aa11.95□□□□□ -0.5
GGA3-219ENST00000584550 ZFYP08048 801 aaPredicted RBP11.95□□□□□ -0.5
GGA3-219ENST00000584550 PDE4AP27815 886 aa11.95□□□□□ -0.5
GGA3-219ENST00000584550 HYAL1Q12794 435 aa11.95□□□□□ -0.5
GGA3-219ENST00000584550 MKRN4PQ13434 485 aaPredicted RBP11.95□□□□□ -0.5
GGA3-219ENST00000584550 COL19A1Q14993 1142 aa11.95□□□□□ -0.5
GGA3-219ENST00000584550 TRIM67Q6ZTA4 783 aa11.95□□□□□ -0.5
GGA3-219ENST00000584550 SUGP1Q8IWZ8 645 aaKnown RBP11.95□□□□□ -0.5
GGA3-219ENST00000584550 TOP1MTQ969P6 601 aa11.95□□□□□ -0.5
GGA3-219ENST00000584550 TAAR1Q96RJ0 339 aa11.95□□□□□ -0.5
GGA3-219ENST00000584550 POP1Q99575 1024 aaKnown RBP11.95□□□□□ -0.5
GGA3-219ENST00000584550 TMEM47Q9BQJ4 181 aa11.95□□□□□ -0.5
GGA3-219ENST00000584550 TOMM22Q9NS69 142 aa11.95□□□□□ -0.5
GGA3-219ENST00000584550 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.95□□□□□ -0.5
GGA3-219ENST00000584550 MYH7BA7E2Y1 1941 aa11.95□□□□□ -0.5
GGA3-219ENST00000584550 ZFHX2Q9C0A1 2572 aaPredicted RBP11.94□□□□□ -0.5
GGA3-219ENST00000584550 EMSYQ7Z589 1322 aa11.94□□□□□ -0.5
GGA3-219ENST00000584550 GRM6O15303 877 aa11.94□□□□□ -0.5
GGA3-219ENST00000584550 TBX10O75333 385 aa11.94□□□□□ -0.5
GGA3-219ENST00000584550 CTNNB1P35222 781 aa11.94□□□□□ -0.5
GGA3-219ENST00000584550 CTC1Q2NKJ3 1217 aa11.94□□□□□ -0.5
GGA3-219ENST00000584550 PLEKHG4Q58EX7 1191 aa11.94□□□□□ -0.5
GGA3-219ENST00000584550 RRP12Q5JTH9 1297 aaKnown RBP11.94□□□□□ -0.5
GGA3-219ENST00000584550 KATNAL1Q9BW62 490 aa11.94□□□□□ -0.5
GGA3-219ENST00000584550 IFIH1Q9BYX4 1025 aaKnown RBP11.94□□□□□ -0.5
GGA3-219ENST00000584550 CPVLQ9H3G5 476 aa11.94□□□□□ -0.5
GGA3-219ENST00000584550 DDX41Q9UJV9 622 aaKnown RBP11.94□□□□□ -0.5
GGA3-219ENST00000584550 KIAA1217Q5T5P2 1943 aa11.94□□□□□ -0.5
GGA3-219ENST00000584550 DMDP11532 3685 aa11.93□□□□□ -0.5
GGA3-219ENST00000584550 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.93□□□□□ -0.5
GGA3-219ENST00000584550 HAS3O00219 553 aa11.93□□□□□ -0.5
GGA3-219ENST00000584550 NCK2O43639 380 aa11.93□□□□□ -0.5
GGA3-219ENST00000584550 CTSHP09668 335 aa11.93□□□□□ -0.5
GGA3-219ENST00000584550 STXBP2Q15833 593 aa11.93□□□□□ -0.5
GGA3-219ENST00000584550 BMP8AQ7Z5Y6 402 aa11.93□□□□□ -0.5
GGA3-219ENST00000584550 SEPT8Q92599 483 aa11.93□□□□□ -0.5
GGA3-219ENST00000584550 ATOH1Q92858 354 aaPredicted RBP11.93□□□□□ -0.5
GGA3-219ENST00000584550 CCDC136Q96JN2 1154 aa11.93□□□□□ -0.5
GGA3-219ENST00000584550 COL20A1Q9P218 1284 aa11.93□□□□□ -0.5
GGA3-219ENST00000584550 CD207Q9UJ71 328 aa11.93□□□□□ -0.5
GGA3-219ENST00000584550 RALGAPA2Q2PPJ7 1873 aa11.92□□□□□ -0.5
GGA3-219ENST00000584550 F2P00734 622 aa11.92□□□□□ -0.5
GGA3-219ENST00000584550 GOLGA8HP0CJ92 632 aa11.92□□□□□ -0.5
GGA3-219ENST00000584550 PDHBP11177 359 aa11.92□□□□□ -0.5
GGA3-219ENST00000584550 TOP1P11387 765 aaKnown RBP11.92□□□□□ -0.5
GGA3-219ENST00000584550 EIF2AK2P19525 551 aaKnown RBP11.92□□□□□ -0.5
GGA3-219ENST00000584550 NOVP48745 357 aa11.92□□□□□ -0.5
GGA3-219ENST00000584550 VCPP55072 806 aaKnown RBP11.92□□□□□ -0.5
GGA3-219ENST00000584550 ZXDAP98168 799 aa11.92□□□□□ -0.5
GGA3-219ENST00000584550 SMAD4Q13485 552 aaKnown RBP11.92□□□□□ -0.5
GGA3-219ENST00000584550 SERINC5Q86VE9 423 aa11.92□□□□□ -0.5
GGA3-219ENST00000584550 FIBCD1Q8N539 461 aa11.92□□□□□ -0.5
GGA3-219ENST00000584550 NSUN6Q8TEA1 469 aaKnown RBP11.92□□□□□ -0.5
GGA3-219ENST00000584550 ATP6V0A1Q93050 837 aa11.92□□□□□ -0.5
GGA3-219ENST00000584550 IL17RAQ96F46 866 aa11.92□□□□□ -0.5
GGA3-219ENST00000584550 RMDN3Q96TC7 470 aa11.92□□□□□ -0.5
GGA3-219ENST00000584550 UBA5Q9GZZ9 404 aa11.92□□□□□ -0.5
GGA3-219ENST00000584550 OSBPL3Q9H4L5 887 aa11.92□□□□□ -0.5
GGA3-219ENST00000584550 MRVI1Q9Y6F6 885 aa11.92□□□□□ -0.5
GGA3-219ENST00000584550 KMT2EQ8IZD2 1858 aa11.91□□□□□ -0.5
GGA3-219ENST00000584550 FOXP2O15409 715 aa11.91□□□□□ -0.5
GGA3-219ENST00000584550 NDUFV1P49821 464 aa11.91□□□□□ -0.5
GGA3-219ENST00000584550 LAMC2Q13753 1193 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms