RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 NOL7Q9UMY1 257 aaKnown RBP11.84□□□□□ -0.51
CCDC47-203ENST00000580986 PTPN22Q9Y2R2 807 aa11.84□□□□□ -0.51
CCDC47-203ENST00000580986 ATP6V1DQ9Y5K8 247 aa11.84□□□□□ -0.51
CCDC47-203ENST00000580986 UBIAD1Q9Y5Z9 338 aa11.84□□□□□ -0.51
CCDC47-203ENST00000580986 MORC2Q9Y6X9 1032 aaPredicted RBP11.84□□□□□ -0.51
CCDC47-203ENST00000580986 RBM47A0AV96 593 aaKnown RBP11.83□□□□□ -0.52
CCDC47-203ENST00000580986 EDIL3O43854 480 aa11.83□□□□□ -0.52
CCDC47-203ENST00000580986 F13A1P00488 732 aa11.83□□□□□ -0.52
CCDC47-203ENST00000580986 ICAM3P32942 547 aa11.83□□□□□ -0.52
CCDC47-203ENST00000580986 FOSBP53539 338 aa11.83□□□□□ -0.52
CCDC47-203ENST00000580986 MRPS9P82933 396 aaKnown RBP11.83□□□□□ -0.52
CCDC47-203ENST00000580986 PDE4DQ08499 809 aa11.83□□□□□ -0.52
CCDC47-203ENST00000580986 Q4G0T1 1027 aa11.83□□□□□ -0.52
CCDC47-203ENST00000580986 CEP55Q53EZ4 464 aa11.83□□□□□ -0.52
CCDC47-203ENST00000580986 EARS2Q5JPH6 523 aaKnown RBP11.83□□□□□ -0.52
CCDC47-203ENST00000580986 MAP3K21Q5TCX8 1036 aa11.83□□□□□ -0.52
CCDC47-203ENST00000580986 MYSM1Q5VVJ2 828 aa11.83□□□□□ -0.52
CCDC47-203ENST00000580986 MFSD14CQ5VZR4 134 aa11.83□□□□□ -0.52
CCDC47-203ENST00000580986 MCTP1Q6DN14 999 aa11.83□□□□□ -0.52
CCDC47-203ENST00000580986 FBXO46Q6PJ61 603 aaPredicted RBP11.83□□□□□ -0.52
CCDC47-203ENST00000580986 SPRYD3Q8NCJ5 442 aa11.83□□□□□ -0.52
CCDC47-203ENST00000580986 RAET1EQ8TD07 263 aa11.83□□□□□ -0.52
CCDC47-203ENST00000580986 TRIB2Q92519 343 aa11.83□□□□□ -0.52
CCDC47-203ENST00000580986 PURBQ96QR8 312 aaKnown RBP11.83□□□□□ -0.52
CCDC47-203ENST00000580986 KATNBL1Q9H079 304 aa11.83□□□□□ -0.52
CCDC47-203ENST00000580986 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.83□□□□□ -0.52
CCDC47-203ENST00000580986 MCM3APO60318 1980 aa11.83□□□□□ -0.52
CCDC47-203ENST00000580986 IGLV3-22A0A075B6J6 115 aa11.82□□□□□ -0.52
CCDC47-203ENST00000580986 MEIS1O00470 390 aa11.82□□□□□ -0.52
CCDC47-203ENST00000580986 TBX3O15119 743 aa11.82□□□□□ -0.52
CCDC47-203ENST00000580986 FIBPO43427 364 aa11.82□□□□□ -0.52
CCDC47-203ENST00000580986 ADCY3O60266 1144 aa11.82□□□□□ -0.52
CCDC47-203ENST00000580986 SNAI1O95863 264 aaPredicted RBP11.82□□□□□ -0.52
CCDC47-203ENST00000580986 BMP15O95972 392 aa11.82□□□□□ -0.52
CCDC47-203ENST00000580986 GRK4P32298 578 aa11.82□□□□□ -0.52
CCDC47-203ENST00000580986 PKP1Q13835 747 aa11.82□□□□□ -0.52
CCDC47-203ENST00000580986 INF2Q27J81 1249 aa11.82□□□□□ -0.52
CCDC47-203ENST00000580986 NLRX1Q86UT6 975 aa11.82□□□□□ -0.52
CCDC47-203ENST00000580986 IL31RAQ8NI17 732 aa11.82□□□□□ -0.52
CCDC47-203ENST00000580986 PGBD1Q96JS3 809 aa11.82□□□□□ -0.52
CCDC47-203ENST00000580986 SENP7Q9BQF6 1050 aa11.82□□□□□ -0.52
CCDC47-203ENST00000580986 MXRA8Q9BRK3 442 aa11.82□□□□□ -0.52
CCDC47-203ENST00000580986 JADE2Q9NQC1 790 aa11.82□□□□□ -0.52
CCDC47-203ENST00000580986 FLRT1Q9NZU1 646 aa11.82□□□□□ -0.52
CCDC47-203ENST00000580986 CHMP5Q9NZZ3 219 aa11.82□□□□□ -0.52
CCDC47-203ENST00000580986 CNPY2Q9Y2B0 182 aa11.82□□□□□ -0.52
CCDC47-203ENST00000580986 ZDHHC9Q9Y397 364 aa11.82□□□□□ -0.52
CCDC47-203ENST00000580986 POTEB3A0JP26 581 aa11.81□□□□□ -0.52
CCDC47-203ENST00000580986 FAM86B1E9PN63 330 aa11.81□□□□□ -0.52
CCDC47-203ENST00000580986 LAD1O00515 517 aa11.81□□□□□ -0.52
CCDC47-203ENST00000580986 NKRFO15226 690 aaKnown RBP eCLIP11.81□□□□□ -0.52
CCDC47-203ENST00000580986 FAM86B2P0C5J1 330 aa11.81□□□□□ -0.52
CCDC47-203ENST00000580986 CYBAP13498 195 aa11.81□□□□□ -0.52
CCDC47-203ENST00000580986 ITGB5P18084 799 aa11.81□□□□□ -0.52
CCDC47-203ENST00000580986 TOB1P50616 345 aaPredicted RBP11.81□□□□□ -0.52
CCDC47-203ENST00000580986 ACVR2BQ13705 512 aa11.81□□□□□ -0.52
CCDC47-203ENST00000580986 CCL14Q16627 93 aa11.81□□□□□ -0.52
CCDC47-203ENST00000580986 POTEBQ6S5H4 581 aa11.81□□□□□ -0.52
CCDC47-203ENST00000580986 SCFD2Q8WU76 684 aa11.81□□□□□ -0.52
CCDC47-203ENST00000580986 LENG9Q96B70 501 aa11.81□□□□□ -0.52
CCDC47-203ENST00000580986 PTCH2Q9Y6C5 1203 aa11.81□□□□□ -0.52
CCDC47-203ENST00000580986 CENPFP49454 3210 aa11.8□□□□□ -0.52
CCDC47-203ENST00000580986 SPATA31C2B4DYI2 1134 aa11.8□□□□□ -0.52
CCDC47-203ENST00000580986 MSCO60682 206 aa11.8□□□□□ -0.52
CCDC47-203ENST00000580986 RGS20O76081 388 aa11.8□□□□□ -0.52
CCDC47-203ENST00000580986 ZNF865P0CJ78 1059 aaPredicted RBP11.8□□□□□ -0.52
CCDC47-203ENST00000580986 CAPN2P17655 700 aa11.8□□□□□ -0.52
CCDC47-203ENST00000580986 MTMR1Q13613 665 aa11.8□□□□□ -0.52
CCDC47-203ENST00000580986 LETM2Q2VYF4 491 aa11.8□□□□□ -0.52
CCDC47-203ENST00000580986 TTC38Q5R3I4 469 aa11.8□□□□□ -0.52
CCDC47-203ENST00000580986 IQSEC1Q6DN90 963 aa11.8□□□□□ -0.52
CCDC47-203ENST00000580986 TAPT1Q6NXT6 567 aa11.8□□□□□ -0.52
CCDC47-203ENST00000580986 CCDC62Q6P9F0 684 aa11.8□□□□□ -0.52
CCDC47-203ENST00000580986 FERMT3Q86UX7 667 aa11.8□□□□□ -0.52
CCDC47-203ENST00000580986 GIMAP8Q8ND71 665 aaPredicted RBP11.8□□□□□ -0.52
CCDC47-203ENST00000580986 FAM20AQ96MK3 541 aa11.8□□□□□ -0.52
CCDC47-203ENST00000580986 KCNMB3Q9NPA1 279 aa11.8□□□□□ -0.52
CCDC47-203ENST00000580986 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.8□□□□□ -0.52
CCDC47-203ENST00000580986 POLR3EQ9NVU0 708 aa11.8□□□□□ -0.52
CCDC47-203ENST00000580986 DDX25Q9UHL0 483 aaKnown RBP11.8□□□□□ -0.52
CCDC47-203ENST00000580986 CEP131Q9UPN4 1083 aa11.8□□□□□ -0.52
CCDC47-203ENST00000580986 Q9Y3F1 56 aa11.8□□□□□ -0.52
CCDC47-203ENST00000580986 NFASCO94856 1347 aa11.8□□□□□ -0.52
CCDC47-203ENST00000580986 SEPT4O43236 478 aa11.79□□□□□ -0.52
CCDC47-203ENST00000580986 NEMFO60524 1076 aa11.79□□□□□ -0.52
CCDC47-203ENST00000580986 CCNT1O60563 726 aaKnown RBP11.79□□□□□ -0.52
CCDC47-203ENST00000580986 MYCLP12524 364 aaPredicted RBP11.79□□□□□ -0.52
CCDC47-203ENST00000580986 AKR1A1P14550 325 aa11.79□□□□□ -0.52
CCDC47-203ENST00000580986 CYP2C19P33261 490 aa11.79□□□□□ -0.52
CCDC47-203ENST00000580986 ZNF76P36508 570 aa11.79□□□□□ -0.52
CCDC47-203ENST00000580986 PRPHP41219 470 aa11.79□□□□□ -0.52
CCDC47-203ENST00000580986 UBXN2AP68543 259 aa11.79□□□□□ -0.52
CCDC47-203ENST00000580986 NKX3-2P78367 333 aa11.79□□□□□ -0.52
CCDC47-203ENST00000580986 CACNB2Q08289 660 aaPredicted RBP11.79□□□□□ -0.52
CCDC47-203ENST00000580986 TTLL4Q14679 1199 aa11.79□□□□□ -0.52
CCDC47-203ENST00000580986 ARL6IP4Q66PJ3 421 aaKnown RBP11.79□□□□□ -0.52
CCDC47-203ENST00000580986 PLA2G4DQ86XP0 818 aa11.79□□□□□ -0.52
CCDC47-203ENST00000580986 SLFN12Q8IYM2 578 aa11.79□□□□□ -0.52
CCDC47-203ENST00000580986 ETNPPLQ8TBG4 499 aa11.79□□□□□ -0.52
CCDC47-203ENST00000580986 EMID1Q96A84 441 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms