RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 UNC80Q8N2C7 3258 aa11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 NOP56O00567 594 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 PFKMP08237 780 aa11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 ACTN1P12814 892 aa11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 UBA1P22314 1058 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 PBX2P40425 430 aa11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 LIFRP42702 1097 aa11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 PSEN2P49810 448 aa11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 NECTIN1Q15223 517 aa11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 RAB30Q15771 203 aa11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 VSIG10LQ86VR7 867 aa11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 CMTR1Q8N1G2 835 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 C7orf31Q8N865 590 aa11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 MAFAQ8NHW3 353 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 EMID1Q96A84 441 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 SPATA33Q96N06 139 aa11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 PBX4Q9BYU1 374 aa11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 FTOQ9C0B1 505 aaKnown RBP eCLIP11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 MLXIPQ9HAP2 919 aa11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 CXXC1Q9P0U4 656 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 SLC4A7Q9Y6M7 1214 aa11.13□□□□□ -0.63
NPLOC4-216ENST00000574344 PITPNM1O00562 1244 aa11.12□□□□□ -0.63
NPLOC4-216ENST00000574344 RGS20O76081 388 aa11.12□□□□□ -0.63
NPLOC4-216ENST00000574344 FGD1P98174 961 aa11.12□□□□□ -0.63
NPLOC4-216ENST00000574344 COL9A3Q14050 684 aaPredicted RBP11.12□□□□□ -0.63
NPLOC4-216ENST00000574344 MFSD10Q14728 455 aa11.12□□□□□ -0.63
NPLOC4-216ENST00000574344 KIAA0753Q2KHM9 967 aa11.12□□□□□ -0.63
NPLOC4-216ENST00000574344 CELF3Q5SZQ8 465 aaKnown RBP11.12□□□□□ -0.63
NPLOC4-216ENST00000574344 RASIP1Q5U651 963 aa11.12□□□□□ -0.63
NPLOC4-216ENST00000574344 GDF6Q6KF10 455 aaPredicted RBP11.12□□□□□ -0.63
NPLOC4-216ENST00000574344 USP17L6PQ6QN14 398 aa11.12□□□□□ -0.63
NPLOC4-216ENST00000574344 SRBD1Q8N5C6 995 aaKnown RBP11.12□□□□□ -0.63
NPLOC4-216ENST00000574344 KAT2BQ92831 832 aa11.12□□□□□ -0.63
NPLOC4-216ENST00000574344 GPKOWQ92917 476 aaPredicted RBP eCLIP11.12□□□□□ -0.637e-6■□□□□ 8.1
NPLOC4-216ENST00000574344 TCEANC2Q96MN5 208 aa11.12□□□□□ -0.63
NPLOC4-216ENST00000574344 NEK1Q96PY6 1258 aa11.12□□□□□ -0.63
NPLOC4-216ENST00000574344 ZNF576Q9H609 170 aa11.12□□□□□ -0.63
NPLOC4-216ENST00000574344 RTEL1Q9NZ71 1219 aa11.12□□□□□ -0.63
NPLOC4-216ENST00000574344 NAP1L2Q9ULW6 460 aaPredicted RBP11.12□□□□□ -0.63
NPLOC4-216ENST00000574344 CHD9Q3L8U1 2897 aa11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 MICAL3Q7RTP6 2002 aa11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 hCG_1642624A0A1W2PR95 340 aa11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 STAM2O75886 525 aa11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 F2P00734 622 aa11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 TGFB3P10600 412 aa11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 SMARCA1P28370 1054 aa11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 RFC2P35250 354 aa11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 KRT32Q14532 448 aa11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 HSDL1Q3SXM5 330 aa11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 MYSM1Q5VVJ2 828 aa11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 TMTC3Q6ZXV5 915 aa11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 HEATR3Q7Z4Q2 680 aa11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 FANCBQ8NB91 859 aa11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 CAGE1Q8TC20 777 aa11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 GAS2L1Q99501 681 aaPredicted RBP11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 NKX2-4Q9H2Z4 354 aa11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 SLC28A3Q9HAS3 691 aa11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 HDAC6Q9UBN7 1215 aa11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 GTF2IRD1Q9UHL9 959 aa11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 PRUNE2Q8WUY3 3088 aa11.11□□□□□ -0.63
NPLOC4-216ENST00000574344 FRMPD4Q14CM0 1322 aa11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 SPDYE3A6NKU9 549 aa11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 ZBTB43O43298 467 aa11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 FIBPO43427 364 aa11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 IQCF3P0C7M6 154 aa11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 ATP2A2P16615 1042 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 RABGGTBP53611 331 aa11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 MRPS9P82933 396 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 SP2Q02086 613 aa11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 SP4Q02446 784 aa11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 NEDD9Q14511 834 aa11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 GRIN2CQ14957 1233 aa11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 RTN1Q16799 776 aa11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 APOA5Q6Q788 366 aa11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 CYFIP1Q7L576 1253 aa11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 NLRX1Q86UT6 975 aa11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 SESTD1Q86VW0 696 aa11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 SGMS1Q86VZ5 419 aa11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 AFAP1L1Q8TED9 768 aa11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 PSTPIP2Q9H939 334 aa11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 EHMT1Q9H9B1 1298 aa11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 RBM28Q9NW13 759 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 A0A0C4DFX4 3053 aa11.1□□□□□ -0.63
NPLOC4-216ENST00000574344 CNTNAP5Q8WYK1 1306 aa11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 COL4A4P53420 1690 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 KLF18A0A0U1RQI7 1052 aa11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 GOLGA8AA7E2F4 631 aa11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 GOLGA8BA8MQT2 603 aa11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 PIK3CDO00329 1044 aa11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 DLL1O00548 723 aa11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 MEIS2O14770 477 aa11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 PPFIA4O75335 1185 aa11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 SELPP16109 830 aa11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 KCNJ6P48051 423 aa11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 NAPAP54920 295 aa11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 UBE2SQ16763 222 aa11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 ADCK5Q3MIX3 580 aa11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 PCNX4Q63HM2 1172 aa11.09□□□□□ -0.63
NPLOC4-216ENST00000574344 PPP2R2DQ66LE6 453 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms