RNA–Protein interactions for RNA: ENST00000561544.1

AC009065.7-201, humanhuman

TSL 3 BASIC

Gene AC009065.7, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009065.7-201ENST00000561544 CST5P28325 142 aaPredicted RBP13.77□□□□□ -0.21
AC009065.7-201ENST00000561544 GJB2P29033 226 aa13.77□□□□□ -0.21
AC009065.7-201ENST00000561544 KRT2P35908 639 aa13.77□□□□□ -0.21
AC009065.7-201ENST00000561544 TRIM29Q14134 588 aa13.77□□□□□ -0.21
AC009065.7-201ENST00000561544 KCNA10Q16322 511 aa13.77□□□□□ -0.21
AC009065.7-201ENST00000561544 FSCN1Q16658 493 aaKnown RBP13.77□□□□□ -0.21
AC009065.7-201ENST00000561544 GNPTABQ3T906 1256 aa13.77□□□□□ -0.21
AC009065.7-201ENST00000561544 CCSAPQ6IQ19 270 aaPredicted RBP13.77□□□□□ -0.21
AC009065.7-201ENST00000561544 GALNT17Q6IS24 598 aa13.77□□□□□ -0.21
AC009065.7-201ENST00000561544 RNF180Q86T96 592 aa13.77□□□□□ -0.21
AC009065.7-201ENST00000561544 FAM184AQ8NB25 1140 aa13.77□□□□□ -0.21
AC009065.7-201ENST00000561544 TBCKQ8TEA7 893 aa13.77□□□□□ -0.21
AC009065.7-201ENST00000561544 TNFRSF25Q93038 417 aa13.77□□□□□ -0.21
AC009065.7-201ENST00000561544 FERMT2Q96AC1 680 aa13.77□□□□□ -0.21
AC009065.7-201ENST00000561544 GPRASP2Q96D09 838 aa13.77□□□□□ -0.21
AC009065.7-201ENST00000561544 C8orf76Q96K31 380 aa13.77□□□□□ -0.21
AC009065.7-201ENST00000561544 C11orf49Q9H6J7 331 aa13.77□□□□□ -0.21
AC009065.7-201ENST00000561544 SCN10AQ9Y5Y9 1956 aa13.77□□□□□ -0.21
AC009065.7-201ENST00000561544 IGLV3-22A0A075B6J6 115 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 A0A1W2PQ45 241 aaPredicted RBP13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 A0A1W2PQY0 241 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 SPATA31C2B4DYI2 1134 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 ASGR1P07306 291 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 ICAM3P32942 547 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 RGS19P49795 217 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 NKX3-2P78367 333 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 MTMR1Q13613 665 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 CUL4AQ13619 759 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 INF2Q27J81 1249 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 CEP55Q53EZ4 464 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 GNASQ5JWF2 1037 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 MCTP2Q6DN12 878 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 KRT25Q7Z3Z0 450 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 NECAB2Q7Z6G3 386 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 NLRX1Q86UT6 975 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 DIS3L2Q8IYB7 885 aaKnown RBP13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 UIMC1Q96RL1 719 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 MXRA8Q9BRK3 442 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 SPC25Q9HBM1 224 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 JADE2Q9NQC1 790 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 PHF24Q9UPV7 400 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 Q9Y3F1 56 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 TELO2Q9Y4R8 837 aa13.76□□□□□ -0.21
AC009065.7-201ENST00000561544 DNAH12Q6ZR08 3092 aa13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 MYH15Q9Y2K3 1946 aa13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 CCDC194A0A1B0GVG4 234 aa13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 BTBD18B2RXH4 712 aa13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 ATP9AO75110 1047 aa13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 MMP3P08254 477 aa13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 CYP3A4P08684 503 aa13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 ARP10275 920 aa13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 KCNA2P16389 499 aa13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 CAPN2P17655 700 aa13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 ZNF76P36508 570 aa13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 ACLYP53396 1101 aa13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 NONOQ15233 471 aaKnown RBP eCLIP13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 CELF3Q5SZQ8 465 aaKnown RBP13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 PIK3AP1Q6ZUJ8 805 aa13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 DHX37Q8IY37 1157 aaKnown RBP13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 AFG1LQ8WV93 481 aa13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 SNX21Q969T3 373 aa13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 SENP6Q9GZR1 1112 aaPredicted RBP13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 BRMS1Q9HCU9 246 aa13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 FOXD4L1Q9NU39 408 aa13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 SMC3Q9UQE7 1217 aa13.75□□□□□ -0.21
AC009065.7-201ENST00000561544 KIF28PB7ZC32 967 aa13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 TDP2O95551 362 aa13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 TGFB3P10600 412 aa13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 CPT1AP50416 773 aa13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 ATN1P54259 1190 aaPredicted RBP13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 SP4Q02446 784 aa13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 ITGB3BPQ13352 177 aaPredicted RBP13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 LRRC26Q2I0M4 334 aa13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 HSDL1Q3SXM5 330 aa13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 MYSM1Q5VVJ2 828 aa13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 KCNV1Q6PIU1 500 aa13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 CXCL17Q6UXB2 119 aa13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 CYFIP1Q7L576 1253 aa13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 PLA2G4DQ86XP0 818 aa13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 HSCBQ8IWL3 235 aa13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 FBXO18Q8NFZ0 1043 aa13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 LENG9Q96B70 501 aa13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 TSEN34Q9BSV6 310 aaKnown RBP13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 KCNH7Q9NS40 1196 aa13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 LTBP2Q14767 1821 aa13.74□□□□□ -0.21
AC009065.7-201ENST00000561544 MOXD2PA6NHM9 499 aa13.73□□□□□ -0.21
AC009065.7-201ENST00000561544 A6NJR5 290 aa13.73□□□□□ -0.21
AC009065.7-201ENST00000561544 MEIS1O00470 390 aa13.73□□□□□ -0.21
AC009065.7-201ENST00000561544 WNT7AO00755 349 aa13.73□□□□□ -0.21
AC009065.7-201ENST00000561544 MYL3P08590 195 aa13.73□□□□□ -0.21
AC009065.7-201ENST00000561544 ZNF286BP0CG31 522 aa13.73□□□□□ -0.21
AC009065.7-201ENST00000561544 PURAQ00577 322 aaKnown RBP13.73□□□□□ -0.21
AC009065.7-201ENST00000561544 PRR16Q569H4 304 aa13.73□□□□□ -0.21
AC009065.7-201ENST00000561544 PCSK9Q8NBP7 692 aaKnown RBP13.73□□□□□ -0.21
AC009065.7-201ENST00000561544 PPTC7Q8NI37 304 aa13.73□□□□□ -0.21
AC009065.7-201ENST00000561544 PPP1R13LQ8WUF5 828 aa13.73□□□□□ -0.21
AC009065.7-201ENST00000561544 EMID1Q96A84 441 aaPredicted RBP13.73□□□□□ -0.21
AC009065.7-201ENST00000561544 CDHR1Q96JP9 859 aa13.73□□□□□ -0.21
AC009065.7-201ENST00000561544 SPATA33Q96N06 139 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms