RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 MRPS9P82933 396 aaKnown RBP13.2□□□□□ -0.3
HERC1-214ENST00000561400 BRAPQ7Z569 592 aa13.2□□□□□ -0.3
HERC1-214ENST00000561400 ZSCAN16Q9H4T2 348 aaPredicted RBP13.2□□□□□ -0.3
HERC1-214ENST00000561400 GRPEL1Q9HAV7 217 aa13.2□□□□□ -0.3
HERC1-214ENST00000561400 FLRT1Q9NZU1 646 aa13.2□□□□□ -0.3
HERC1-214ENST00000561400 GTF2A1P52655 376 aaPredicted RBP13.2□□□□□ -0.3
HERC1-214ENST00000561400 LBX1P52954 281 aa13.2□□□□□ -0.3
HERC1-214ENST00000561400 OTOP1Q7RTM1 612 aa13.2□□□□□ -0.3
HERC1-214ENST00000561400 ZNF467Q7Z7K2 595 aaPredicted RBP13.2□□□□□ -0.3
HERC1-214ENST00000561400 VSIG10LQ86VR7 867 aa13.2□□□□□ -0.3
HERC1-214ENST00000561400 APBA2Q99767 749 aa13.2□□□□□ -0.3
HERC1-214ENST00000561400 CHMP5Q9NZZ3 219 aa13.2□□□□□ -0.3
HERC1-214ENST00000561400 GNRH1P01148 92 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 MYCLP12524 364 aaPredicted RBP13.19□□□□□ -0.3
HERC1-214ENST00000561400 ATP2B1P20020 1258 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 FOXD4L6Q3SYB3 417 aaPredicted RBP13.19□□□□□ -0.3
HERC1-214ENST00000561400 MYSM1Q5VVJ2 828 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 PCNX4Q63HM2 1172 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 FOXD4L3Q6VB84 417 aaPredicted RBP13.19□□□□□ -0.3
HERC1-214ENST00000561400 TSHZ1Q6ZSZ6 1077 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 NEK8Q86SG6 692 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 IWS1Q96ST2 819 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 EHMT1Q9H9B1 1298 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 SLC5A4Q9NY91 659 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 DONSONQ9NYP3 566 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 IGHA2P01877 340 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 CYP3A4P08684 503 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 XRCC5P13010 732 aaKnown RBP13.19□□□□□ -0.3
HERC1-214ENST00000561400 HOXD10P28358 340 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 USP11P51784 963 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 LETM2Q2VYF4 491 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 MAMDC4Q6UXC1 1216 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 CYP2W1Q8TAV3 490 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 MORC4Q8TE76 937 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 CHAMP1Q96JM3 812 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 TINF2Q9BSI4 451 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 RTEL1Q9NZ71 1219 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 TRIM17Q9Y577 477 aa13.19□□□□□ -0.3
HERC1-214ENST00000561400 FAM86B1E9PN63 330 aa13.18□□□□□ -0.3
HERC1-214ENST00000561400 TDP2O95551 362 aa13.18□□□□□ -0.3
HERC1-214ENST00000561400 FAM86B2P0C5J1 330 aa13.18□□□□□ -0.3
HERC1-214ENST00000561400 CCND2P30279 289 aa13.18□□□□□ -0.3
HERC1-214ENST00000561400 NOP2P46087 812 aaKnown RBP13.18□□□□□ -0.3
HERC1-214ENST00000561400 CTCFP49711 727 aaPredicted RBP13.18□□□□□ -0.3
HERC1-214ENST00000561400 ARHGEF6Q15052 776 aa13.18□□□□□ -0.3
HERC1-214ENST00000561400 RINLQ6ZS11 566 aa13.18□□□□□ -0.3
HERC1-214ENST00000561400 ARMCX2Q7L311 632 aa13.18□□□□□ -0.3
HERC1-214ENST00000561400 CALCOCO1Q9P1Z2 691 aa13.18□□□□□ -0.3
HERC1-214ENST00000561400 PCDHB6Q9Y5E3 794 aa13.18□□□□□ -0.3
HERC1-214ENST00000561400 ASB14A6NK59 587 aa13.17□□□□□ -0.3
HERC1-214ENST00000561400 RGS20O76081 388 aa13.17□□□□□ -0.3
HERC1-214ENST00000561400 SNAI1O95863 264 aaPredicted RBP13.17□□□□□ -0.3
HERC1-214ENST00000561400 ITGB5P18084 799 aa13.17□□□□□ -0.3
HERC1-214ENST00000561400 MSNP26038 577 aaKnown RBP13.17□□□□□ -0.3
HERC1-214ENST00000561400 IRF5Q13568 498 aa13.17□□□□□ -0.3
HERC1-214ENST00000561400 STXBP2Q15833 593 aa13.17□□□□□ -0.3
HERC1-214ENST00000561400 RILPL1Q5EBL4 403 aa13.17□□□□□ -0.3
HERC1-214ENST00000561400 SASS6Q6UVJ0 657 aa13.17□□□□□ -0.3
HERC1-214ENST00000561400 EEPD1Q7L9B9 569 aa13.17□□□□□ -0.3
HERC1-214ENST00000561400 TRIB2Q92519 343 aa13.17□□□□□ -0.3
HERC1-214ENST00000561400 FTOQ9C0B1 505 aaKnown RBP eCLIP13.17□□□□□ -0.3
HERC1-214ENST00000561400 DOCK5Q9H7D0 1870 aa13.17□□□□□ -0.3
HERC1-214ENST00000561400 IGLV3-22A0A075B6J6 115 aa13.17□□□□□ -0.3
HERC1-214ENST00000561400 CCNT1O60563 726 aaKnown RBP13.17□□□□□ -0.3
HERC1-214ENST00000561400 CIITAP33076 1130 aa13.17□□□□□ -0.3
HERC1-214ENST00000561400 CYP2C19P33261 490 aa13.17□□□□□ -0.3
HERC1-214ENST00000561400 GABPB1Q06547 395 aaPredicted RBP13.17□□□□□ -0.3
HERC1-214ENST00000561400 PDE4DQ08499 809 aa13.17□□□□□ -0.3
HERC1-214ENST00000561400 OLFML2BQ68BL8 750 aa13.17□□□□□ -0.3
HERC1-214ENST00000561400 FEZ2Q9UHY8 353 aaPredicted RBP13.17□□□□□ -0.3
HERC1-214ENST00000561400 NOL7Q9UMY1 257 aaKnown RBP13.17□□□□□ -0.3
HERC1-214ENST00000561400 UBIAD1Q9Y5Z9 338 aa13.17□□□□□ -0.3
HERC1-214ENST00000561400 CYP3A7-CYP3A51PA0A087WV96 503 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 SLC37A4O43826 429 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 KIF1CO43896 1103 aaKnown RBP13.16□□□□□ -0.3
HERC1-214ENST00000561400 EIF3JO75822 258 aaKnown RBP13.16□□□□□ -0.3
HERC1-214ENST00000561400 ELNP15502 786 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 CYP3A7P24462 503 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 TRAPPC10P48553 1259 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 ZNF174Q15697 407 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 CEP55Q53EZ4 464 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 TTC38Q5R3I4 469 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 XRRA1Q6P2D8 792 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 LENG9Q96B70 501 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 INPP4AQ96PE3 977 aaPredicted RBP13.16□□□□□ -0.3
HERC1-214ENST00000561400 WDR11Q9BZH6 1224 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 KATNBL1Q9H079 304 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.16□□□□□ -0.3
HERC1-214ENST00000561400 SYNGAP1Q96PV0 1343 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 B4DLN1 442 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 MEIS1O00470 390 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 ADCY3O60266 1144 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 MCM7P33993 719 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 ZNF76P36508 570 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 DNM1Q05193 864 aaKnown RBP13.16□□□□□ -0.3
HERC1-214ENST00000561400 MTA1Q13330 715 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 PRR16Q569H4 304 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 PPP4R3AQ6IN85 833 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 MOXD1Q6UVY6 613 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 FBXO16Q8IX29 292 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms