RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 GSTCDQ8NEC7 633 aa7.02□□□□□ -1.29
USP8-218ENST00000561330 SLC7A14Q8TBB6 771 aa7.02□□□□□ -1.29
USP8-218ENST00000561330 PIP4K2CQ8TBX8 421 aa7.02□□□□□ -1.29
USP8-218ENST00000561330 MAGEB10Q96LZ2 347 aaPredicted RBP7.02□□□□□ -1.29
USP8-218ENST00000561330 CNOT6Q9ULM6 557 aaKnown RBP7.02□□□□□ -1.29
USP8-218ENST00000561330 PLA2G2DQ9UNK4 145 aa7.02□□□□□ -1.29
USP8-218ENST00000561330 ZNF652Q9Y2D9 606 aa7.02□□□□□ -1.29
USP8-218ENST00000561330 ESYT3A0FGR9 886 aa7.01□□□□□ -1.29
USP8-218ENST00000561330 IRS4O14654 1257 aaPredicted RBP7.01□□□□□ -1.29
USP8-218ENST00000561330 PLD2O14939 933 aa7.01□□□□□ -1.29
USP8-218ENST00000561330 TADA3O75528 432 aa7.01□□□□□ -1.29
USP8-218ENST00000561330 OTOP3Q7RTS5 596 aa7.01□□□□□ -1.29
USP8-218ENST00000561330 AMIGO3Q86WK7 504 aa7.01□□□□□ -1.29
USP8-218ENST00000561330 HOMER1Q86YM7 354 aa7.01□□□□□ -1.29
USP8-218ENST00000561330 PCDH19Q8TAB3 1148 aa7.01□□□□□ -1.29
USP8-218ENST00000561330 FBXW5Q969U6 566 aa7.01□□□□□ -1.29
USP8-218ENST00000561330 SMOC1Q9H4F8 434 aa7.01□□□□□ -1.29
USP8-218ENST00000561330 GOLGA2P5Q9HBQ8 144 aa7.01□□□□□ -1.29
USP8-218ENST00000561330 SLC6A20Q9NP91 592 aa7.01□□□□□ -1.29
USP8-218ENST00000561330 FAN1Q9Y2M0 1017 aa7.01□□□□□ -1.29
USP8-218ENST00000561330 KCTD3Q9Y597 815 aa7.01□□□□□ -1.29
USP8-218ENST00000561330 PCDHB4Q9Y5E5 795 aa7.01□□□□□ -1.29
USP8-218ENST00000561330 ARVCFO00192 962 aa7□□□□□ -1.29
USP8-218ENST00000561330 WNT9AO14904 365 aa7□□□□□ -1.29
USP8-218ENST00000561330 PPP1R12AO14974 1030 aaPredicted RBP7□□□□□ -1.29
USP8-218ENST00000561330 KCNQ2O43526 872 aa7□□□□□ -1.29
USP8-218ENST00000561330 RAPGEF3O95398 923 aa7□□□□□ -1.29
USP8-218ENST00000561330 SRGAP2CP0DJJ0 459 aa7□□□□□ -1.29
USP8-218ENST00000561330 COL6A2P12110 1019 aa7□□□□□ -1.29
USP8-218ENST00000561330 IGFBP6P24592 240 aaPredicted RBP7□□□□□ -1.29
USP8-218ENST00000561330 LINC00310P59036 64 aa7□□□□□ -1.29
USP8-218ENST00000561330 SSPNQ14714 243 aa7□□□□□ -1.29
USP8-218ENST00000561330 CYP4F22Q6NT55 531 aa7□□□□□ -1.29
USP8-218ENST00000561330 ETV3LQ6ZN32 361 aa7□□□□□ -1.29
USP8-218ENST00000561330 JAZF1Q86VZ6 243 aa7□□□□□ -1.29
USP8-218ENST00000561330 ZC3H7AQ8IWR0 971 aaKnown RBP7□□□□□ -1.29
USP8-218ENST00000561330 PHOSPHO1Q8TCT1 267 aa7□□□□□ -1.29
USP8-218ENST00000561330 CPA5Q8WXQ8 436 aa7□□□□□ -1.29
USP8-218ENST00000561330 APPBP2Q92624 585 aa7□□□□□ -1.29
USP8-218ENST00000561330 YIPF4Q9BSR8 244 aa7□□□□□ -1.29
USP8-218ENST00000561330 MYOTQ9UBF9 498 aa7□□□□□ -1.29
USP8-218ENST00000561330 NUB1Q9Y5A7 615 aa7□□□□□ -1.29
USP8-218ENST00000561330 MRPL42Q9Y6G3 142 aaKnown RBP7□□□□□ -1.29
USP8-218ENST00000561330 DBX1A6NMT0 343 aa6.99□□□□□ -1.29
USP8-218ENST00000561330 RFXAPO00287 272 aa6.99□□□□□ -1.29
USP8-218ENST00000561330 GSTA4O15217 222 aa6.99□□□□□ -1.29
USP8-218ENST00000561330 RASGRP1O95267 797 aa6.99□□□□□ -1.29
USP8-218ENST00000561330 ASMTLO95671 621 aa6.99□□□□□ -1.29
USP8-218ENST00000561330 ATF2P15336 505 aa6.99□□□□□ -1.29
USP8-218ENST00000561330 PI3P19957 117 aa6.99□□□□□ -1.29
USP8-218ENST00000561330 CACNB2Q08289 660 aaPredicted RBP6.99□□□□□ -1.29
USP8-218ENST00000561330 TCEA2Q15560 299 aa6.99□□□□□ -1.29
USP8-218ENST00000561330 FNDC3BQ53EP0 1204 aaKnown RBP6.99□□□□□ -1.29
USP8-218ENST00000561330 ZNF385BQ569K4 471 aa6.99□□□□□ -1.29
USP8-218ENST00000561330 BRAPQ7Z569 592 aa6.99□□□□□ -1.29
USP8-218ENST00000561330 MIB1Q86YT6 1006 aa6.99□□□□□ -1.29
USP8-218ENST00000561330 SYNPOQ8N3V7 929 aa6.99□□□□□ -1.29
USP8-218ENST00000561330 TOX2Q96NM4 488 aa6.99□□□□□ -1.29
USP8-218ENST00000561330 FANCLQ9NW38 375 aa6.99□□□□□ -1.29
USP8-218ENST00000561330 TCRBV5S2A0A599 114 aa6.98□□□□□ -1.29
USP8-218ENST00000561330 BTBD11A6QL63 1104 aa6.98□□□□□ -1.29
USP8-218ENST00000561330 YBX3P16989 372 aaKnown RBP eCLIP6.98□□□□□ -1.29
USP8-218ENST00000561330 MC3RP41968 323 aa6.98□□□□□ -1.29
USP8-218ENST00000561330 ST5P78524 1137 aa6.98□□□□□ -1.29
USP8-218ENST00000561330 FOXO4P98177 505 aa6.98□□□□□ -1.29
USP8-218ENST00000561330 FAM47CQ5HY64 1035 aa6.98□□□□□ -1.29
USP8-218ENST00000561330 HABP4Q5JVS0 413 aaKnown RBP6.98□□□□□ -1.29
USP8-218ENST00000561330 C16orf86Q6ZW13 317 aa6.98□□□□□ -1.29
USP8-218ENST00000561330 B3GNT8Q7Z7M8 397 aa6.98□□□□□ -1.29
USP8-218ENST00000561330 ZC3H18Q86VM9 953 aaKnown RBP6.98□□□□□ -1.29
USP8-218ENST00000561330 TRIM48Q8IWZ4 208 aa6.98□□□□□ -1.29
USP8-218ENST00000561330 FAM126BQ8IXS8 530 aa6.98□□□□□ -1.29
USP8-218ENST00000561330 DDX11Q96FC9 970 aa6.98□□□□□ -1.29
USP8-218ENST00000561330 SCLYQ96I15 445 aa6.98□□□□□ -1.29
USP8-218ENST00000561330 TRIM39Q9HCM9 518 aa6.98□□□□□ -1.29
USP8-218ENST00000561330 CATSPERZQ9NTU4 200 aa6.98□□□□□ -1.29
USP8-218ENST00000561330 DSEQ9UL01 958 aa6.98□□□□□ -1.29
USP8-218ENST00000561330 SLC27A2O14975 620 aa6.97□□□□□ -1.29
USP8-218ENST00000561330 NKRFO15226 690 aaKnown RBP eCLIP6.97□□□□□ -1.29
USP8-218ENST00000561330 IGSF3O75054 1194 aa6.97□□□□□ -1.29
USP8-218ENST00000561330 CDC45O75419 566 aa6.97□□□□□ -1.29
USP8-218ENST00000561330 LIMS1P48059 325 aa6.97□□□□□ -1.29
USP8-218ENST00000561330 CIAPIN1Q6FI81 312 aa6.97□□□□□ -1.29
USP8-218ENST00000561330 CNKSR3Q6P9H4 555 aa6.97□□□□□ -1.29
USP8-218ENST00000561330 C16orf59Q7L2K0 433 aa6.97□□□□□ -1.29
USP8-218ENST00000561330 FGD2Q7Z6J4 655 aa6.97□□□□□ -1.29
USP8-218ENST00000561330 TMEFF1Q8IYR6 380 aa6.97□□□□□ -1.29
USP8-218ENST00000561330 NLGN1Q8N2Q7 840 aa6.97□□□□□ -1.29
USP8-218ENST00000561330 ARRDC4Q8NCT1 418 aa6.97□□□□□ -1.29
USP8-218ENST00000561330 UHMK1Q8TAS1 419 aaKnown RBP6.97□□□□□ -1.29
USP8-218ENST00000561330 PANK1Q8TE04 598 aa6.97□□□□□ -1.29
USP8-218ENST00000561330 NGRNQ9NPE2 291 aaKnown RBP6.97□□□□□ -1.29
USP8-218ENST00000561330 ASH2LQ9UBL3 628 aa6.97□□□□□ -1.29
USP8-218ENST00000561330 TCRBV16S1A1N1A0A5B0 115 aa6.96□□□□□ -1.3
USP8-218ENST00000561330 CCDC66A2RUB6 948 aa6.96□□□□□ -1.3
USP8-218ENST00000561330 NUAK1O60285 661 aa6.96□□□□□ -1.3
USP8-218ENST00000561330 PYGMP11217 842 aa6.96□□□□□ -1.3
USP8-218ENST00000561330 STAT5AP42229 794 aa6.96□□□□□ -1.3
USP8-218ENST00000561330 DNM2P50570 870 aa6.96□□□□□ -1.3
USP8-218ENST00000561330 TUSC3Q13454 348 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms