RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.87□□□□□ -0.19
ACTN1-221ENST00000556571 ANKS1AQ92625 1134 aa13.87□□□□□ -0.19
ACTN1-221ENST00000556571 ZKSCAN3Q9BRR0 538 aa13.87□□□□□ -0.19
ACTN1-221ENST00000556571 KAT14Q9H8E8 782 aa13.87□□□□□ -0.19
ACTN1-221ENST00000556571 PXMP2Q9NR77 195 aa13.87□□□□□ -0.19
ACTN1-221ENST00000556571 RSPH10B2B2RC85 870 aa13.86□□□□□ -0.19
ACTN1-221ENST00000556571 ZNF213O14771 459 aa13.86□□□□□ -0.19
ACTN1-221ENST00000556571 DHX16O60231 1041 aaKnown RBP13.86□□□□□ -0.19
ACTN1-221ENST00000556571 RSPH10BP0C881 870 aa13.86□□□□□ -0.19
ACTN1-221ENST00000556571 ZNF286BP0CG31 522 aa13.86□□□□□ -0.19
ACTN1-221ENST00000556571 SSTR3P32745 418 aaPredicted RBP13.86□□□□□ -0.19
ACTN1-221ENST00000556571 HTRA4P83105 476 aaPredicted RBP13.86□□□□□ -0.19
ACTN1-221ENST00000556571 ZNF200P98182 395 aaPredicted RBP13.86□□□□□ -0.19
ACTN1-221ENST00000556571 PTCRAQ6ISU1 281 aaPredicted RBP13.86□□□□□ -0.19
ACTN1-221ENST00000556571 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.86□□□□□ -0.196e-6■□□□□ 8.2
ACTN1-221ENST00000556571 DBF4BQ8NFT6 615 aa13.86□□□□□ -0.19
ACTN1-221ENST00000556571 WNT8BQ93098 351 aa13.86□□□□□ -0.19
ACTN1-221ENST00000556571 MRPL38Q96DV4 380 aaKnown RBP13.86□□□□□ -0.19
ACTN1-221ENST00000556571 SAMD11Q96NU1 681 aa13.86□□□□□ -0.19
ACTN1-221ENST00000556571 C17orf80Q9BSJ5 609 aa13.86□□□□□ -0.19
ACTN1-221ENST00000556571 NEDD4P46934 1319 aa13.86□□□□□ -0.19
ACTN1-221ENST00000556571 GRXCR2A6NFK2 248 aa13.85□□□□□ -0.19
ACTN1-221ENST00000556571 KDM4AO75164 1064 aa13.85□□□□□ -0.19
ACTN1-221ENST00000556571 CFBP00751 764 aa13.85□□□□□ -0.19
ACTN1-221ENST00000556571 PARP1P09874 1014 aaKnown RBP13.85□□□□□ -0.19
ACTN1-221ENST00000556571 IL9P15248 144 aa13.85□□□□□ -0.19
ACTN1-221ENST00000556571 THPOP40225 353 aa13.85□□□□□ -0.19
ACTN1-221ENST00000556571 MKRN4PQ13434 485 aaPredicted RBP13.85□□□□□ -0.19
ACTN1-221ENST00000556571 CELF3Q5SZQ8 465 aaKnown RBP13.85□□□□□ -0.19
ACTN1-221ENST00000556571 MYSM1Q5VVJ2 828 aa13.85□□□□□ -0.19
ACTN1-221ENST00000556571 SERINC5Q86VE9 423 aa13.85□□□□□ -0.19
ACTN1-221ENST00000556571 MYOCDQ8IZQ8 938 aa13.85□□□□□ -0.19
ACTN1-221ENST00000556571 SP7Q8TDD2 431 aaPredicted RBP13.85□□□□□ -0.19
ACTN1-221ENST00000556571 SPATA33Q96N06 139 aa13.85□□□□□ -0.19
ACTN1-221ENST00000556571 ZSCAN10Q96SZ4 725 aaPredicted RBP13.85□□□□□ -0.19
ACTN1-221ENST00000556571 JMJD4Q9H9V9 463 aa13.85□□□□□ -0.19
ACTN1-221ENST00000556571 VAT1LQ9HCJ6 419 aa13.85□□□□□ -0.19
ACTN1-221ENST00000556571 MAP3K20Q9NYL2 800 aaKnown RBP13.85□□□□□ -0.19
ACTN1-221ENST00000556571 PTPRSQ13332 1948 aa13.84□□□□□ -0.19
ACTN1-221ENST00000556571 TRIM6-TRIM34B2RNG4 842 aa13.84□□□□□ -0.19
ACTN1-221ENST00000556571 TGFB3P10600 412 aa13.84□□□□□ -0.19
ACTN1-221ENST00000556571 HSD17B4P51659 736 aa13.84□□□□□ -0.19
ACTN1-221ENST00000556571 GHRHRQ02643 423 aa13.84□□□□□ -0.19
ACTN1-221ENST00000556571 EPC2Q52LR7 807 aa13.84□□□□□ -0.19
ACTN1-221ENST00000556571 TIGD5Q53EQ6 642 aa13.84□□□□□ -0.19
ACTN1-221ENST00000556571 PLEKHG4Q58EX7 1191 aa13.84□□□□□ -0.19
ACTN1-221ENST00000556571 SAMD3Q8N6K7 520 aa13.84□□□□□ -0.19
ACTN1-221ENST00000556571 NEK9Q8TD19 979 aa13.84□□□□□ -0.19
ACTN1-221ENST00000556571 PDCD2LQ9BRP1 358 aa13.84□□□□□ -0.19
ACTN1-221ENST00000556571 AMNQ9BXJ7 453 aa13.84□□□□□ -0.19
ACTN1-221ENST00000556571 COL4A4P53420 1690 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-221ENST00000556571 C17orf102A2RUQ5 167 aa13.83□□□□□ -0.2
ACTN1-221ENST00000556571 H3BNC9 293 aa13.83□□□□□ -0.2
ACTN1-221ENST00000556571 RGS20O76081 388 aa13.83□□□□□ -0.2
ACTN1-221ENST00000556571 GGPS1O95749 300 aa13.83□□□□□ -0.2
ACTN1-221ENST00000556571 MYCLP12524 364 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-221ENST00000556571 HIC1Q14526 733 aa13.83□□□□□ -0.2
ACTN1-221ENST00000556571 CSPP1Q1MSJ5 1256 aa13.83□□□□□ -0.2
ACTN1-221ENST00000556571 HSDL1Q3SXM5 330 aa13.83□□□□□ -0.2
ACTN1-221ENST00000556571 STOX1Q6ZVD7 989 aa13.83□□□□□ -0.2
ACTN1-221ENST00000556571 VSIG10LQ86VR7 867 aa13.83□□□□□ -0.2
ACTN1-221ENST00000556571 ENAHQ8N8S7 591 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-221ENST00000556571 SEPT8Q92599 483 aa13.83□□□□□ -0.2
ACTN1-221ENST00000556571 ATP6V0A1Q93050 837 aa13.83□□□□□ -0.2
ACTN1-221ENST00000556571 TOP1MTQ969P6 601 aa13.83□□□□□ -0.2
ACTN1-221ENST00000556571 RILPL2Q969X0 211 aa13.83□□□□□ -0.2
ACTN1-221ENST00000556571 YME1L1Q96TA2 773 aa13.83□□□□□ -0.2
ACTN1-221ENST00000556571 C16orf70Q9BSU1 422 aa13.83□□□□□ -0.2
ACTN1-221ENST00000556571 FAM50BQ9Y247 325 aa13.83□□□□□ -0.2
ACTN1-221ENST00000556571 H3BQ06 376 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-221ENST00000556571 OPLAHO14841 1288 aa13.82□□□□□ -0.2
ACTN1-221ENST00000556571 CAND2O75155 1236 aa13.82□□□□□ -0.2
ACTN1-221ENST00000556571 SDSP20132 328 aa13.82□□□□□ -0.2
ACTN1-221ENST00000556571 GPM6BQ13491 265 aa13.82□□□□□ -0.2
ACTN1-221ENST00000556571 ALYREFQ86V81 257 aaKnown RBP13.82□□□□□ -0.2
ACTN1-221ENST00000556571 BANK1Q8NDB2 785 aa13.82□□□□□ -0.2
ACTN1-221ENST00000556571 PABPC5Q96DU9 382 aaKnown RBP13.82□□□□□ -0.2
ACTN1-221ENST00000556571 UIMC1Q96RL1 719 aa13.82□□□□□ -0.2
ACTN1-221ENST00000556571 MLXIPQ9HAP2 919 aa13.82□□□□□ -0.2
ACTN1-221ENST00000556571 ZSWIM5Q9P217 1185 aa13.82□□□□□ -0.2
ACTN1-221ENST00000556571 B4E1Z4 1266 aa13.81□□□□□ -0.2
ACTN1-221ENST00000556571 H3BRB1 525 aa13.81□□□□□ -0.2
ACTN1-221ENST00000556571 DCXO43602 365 aa13.81□□□□□ -0.2
ACTN1-221ENST00000556571 SORBS3O60504 671 aa13.81□□□□□ -0.2
ACTN1-221ENST00000556571 UBA1P22314 1058 aaKnown RBP13.81□□□□□ -0.2
ACTN1-221ENST00000556571 HOXC8P31273 242 aa13.81□□□□□ -0.2
ACTN1-221ENST00000556571 SP2Q02086 613 aa13.81□□□□□ -0.2
ACTN1-221ENST00000556571 HDAC1Q13547 482 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-221ENST00000556571 PGM5Q15124 567 aa13.81□□□□□ -0.2
ACTN1-221ENST00000556571 TMEM192Q8IY95 271 aa13.81□□□□□ -0.2
ACTN1-221ENST00000556571 TUT1Q9H6E5 874 aaKnown RBP13.81□□□□□ -0.2
ACTN1-221ENST00000556571 PRKAG3Q9UGI9 489 aa13.81□□□□□ -0.2
ACTN1-221ENST00000556571 PCDHA1Q9Y5I3 950 aa13.81□□□□□ -0.2
ACTN1-221ENST00000556571 KIAA1217Q5T5P2 1943 aa13.81□□□□□ -0.2
ACTN1-221ENST00000556571 SIP14410 1827 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 POTEB3A0JP26 581 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 KLRF2D3W0D1 207 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 ZBTB5O15062 677 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 TREHO43280 583 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 NCK2O43639 380 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms