RNA–Protein interactions for RNA: ENST00000556513.5

HNRNPC-225, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-225ENST00000556513 USP17L6PQ6QN14 398 aa11.88□□□□□ -0.51
HNRNPC-225ENST00000556513 ANKRD33Q7Z3H0 272 aa11.88□□□□□ -0.51
HNRNPC-225ENST00000556513 PPP1R13LQ8WUF5 828 aa11.88□□□□□ -0.51
HNRNPC-225ENST00000556513 GPKOWQ92917 476 aaPredicted RBP eCLIP11.88□□□□□ -0.515e-6■■□□□ 13.3
HNRNPC-225ENST00000556513 BADQ92934 168 aa11.88□□□□□ -0.51
HNRNPC-225ENST00000556513 ZNF274Q96GC6 653 aaPredicted RBP11.88□□□□□ -0.51
HNRNPC-225ENST00000556513 TMEM39AQ9NV64 488 aa11.88□□□□□ -0.51
HNRNPC-225ENST00000556513 ZDHHC9Q9Y397 364 aa11.88□□□□□ -0.51
HNRNPC-225ENST00000556513 GOLGA6L3A6NEY3 463 aa11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 ARVCFO00192 962 aa11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 NKRFO15226 690 aaKnown RBP eCLIP11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 STX6O43752 255 aa11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 LETM1O95202 739 aaPredicted RBP11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 ZSCAN22P10073 491 aaPredicted RBP11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 ITGB8P26012 769 aa11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 CDC27P30260 824 aa11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 CDK7P50613 346 aa11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 CHMP4BP1P59074 171 aa11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 HMGN5P82970 282 aaKnown RBP11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 ITGA7Q13683 1181 aa11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 CCDC62Q6P9F0 684 aa11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 HEATR3Q7Z4Q2 680 aa11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 SMARCC2Q8TAQ2 1214 aa11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 FAM217BQ9NTX9 383 aaPredicted RBP11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 LMBRD1Q9NUN5 540 aa11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 MRVI1Q9Y6F6 885 aa11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 GRIN2DO15399 1336 aa11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 CNTNAP5Q8WYK1 1306 aa11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 SCN5AQ14524 2016 aa11.87□□□□□ -0.51
HNRNPC-225ENST00000556513 hCG_1984214I3L0E3 225 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 MEIS2O14770 477 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 CABYRO75952 493 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 RGS20O76081 388 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 RAG1P15918 1043 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 CCND2P30279 289 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 ADD1P35611 737 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 METAP2P50579 478 aaKnown RBP eCLIP11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 ZNF445P59923 1031 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 PURAQ00577 322 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 UBE2SQ16763 222 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 BRDTQ58F21 947 aaPredicted RBP11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 MROH7Q68CQ1 1323 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 VSIG10LQ86VR7 867 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 FAM126BQ8IXS8 530 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 TDHQ8IZJ6 230 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 ZNF713Q8N859 430 aaPredicted RBP11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 AFG1LQ8WV93 481 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 CUL5Q93034 780 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 TOX2Q96NM4 488 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 POLR3EQ9NVU0 708 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 V9GY48 417 aaPredicted RBP11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 A0A1W2PPC1 479 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 A6NJR5 290 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 PIK3CDO00329 1044 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 SOX1O00570 391 aaPredicted RBP11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 KIAA0355O15063 1070 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 TLR3O15455 904 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 GH1P01241 217 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 ARHGAP1Q07960 439 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 WWC2Q6AWC2 1192 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 PPP1R12CQ9BZL4 782 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 TRPV6Q9H1D0 765 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 PSTPIP2Q9H939 334 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 RTEL1Q9NZ71 1219 aa11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 DDX41Q9UJV9 622 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-225ENST00000556513 KAT6AQ92794 2004 aa11.85□□□□□ -0.51
HNRNPC-225ENST00000556513 FRMPD4Q14CM0 1322 aa11.85□□□□□ -0.51
HNRNPC-225ENST00000556513 PPFIA3O75145 1194 aa11.85□□□□□ -0.51
HNRNPC-225ENST00000556513 SLC34A2O95436 690 aa11.85□□□□□ -0.51
HNRNPC-225ENST00000556513 MMP3P08254 477 aa11.85□□□□□ -0.51
HNRNPC-225ENST00000556513 SYT1P21579 422 aa11.85□□□□□ -0.51
HNRNPC-225ENST00000556513 NAPAP54920 295 aa11.85□□□□□ -0.51
HNRNPC-225ENST00000556513 MRPS9P82933 396 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-225ENST00000556513 TOB2Q14106 344 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-225ENST00000556513 DHX37Q8IY37 1157 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-225ENST00000556513 SLC43A3Q8NBI5 491 aa11.85□□□□□ -0.51
HNRNPC-225ENST00000556513 LRCH3Q96II8 777 aa11.85□□□□□ -0.51
HNRNPC-225ENST00000556513 LARP6Q9BRS8 491 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-225ENST00000556513 MTG1Q9BT17 334 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-225ENST00000556513 ZSCAN16Q9H4T2 348 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-225ENST00000556513 TBX21Q9UL17 535 aa11.85□□□□□ -0.51
HNRNPC-225ENST00000556513 B4GALT4O60513 344 aa11.84□□□□□ -0.51
HNRNPC-225ENST00000556513 PFKFB2O60825 505 aa11.84□□□□□ -0.51
HNRNPC-225ENST00000556513 GGPS1O95749 300 aa11.84□□□□□ -0.51
HNRNPC-225ENST00000556513 TIMP1P01033 207 aa11.84□□□□□ -0.51
HNRNPC-225ENST00000556513 CD4P01730 458 aa11.84□□□□□ -0.51
HNRNPC-225ENST00000556513 PDIA3P30101 505 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-225ENST00000556513 CCT2P78371 535 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-225ENST00000556513 SP2Q02086 613 aa11.84□□□□□ -0.51
HNRNPC-225ENST00000556513 ME3Q16798 604 aa11.84□□□□□ -0.51
HNRNPC-225ENST00000556513 NBPF20Q3BBV1 942 aa11.84□□□□□ -0.51
HNRNPC-225ENST00000556513 FAM47CQ5HY64 1035 aa11.84□□□□□ -0.51
HNRNPC-225ENST00000556513 TYW1BQ6NUM6 668 aa11.84□□□□□ -0.51
HNRNPC-225ENST00000556513 PPP1R18Q6NYC8 613 aa11.84□□□□□ -0.51
HNRNPC-225ENST00000556513 GTF3C6Q969F1 213 aa11.84□□□□□ -0.51
HNRNPC-225ENST00000556513 BCAS3Q9H6U6 928 aa11.84□□□□□ -0.51
HNRNPC-225ENST00000556513 TRMT13Q9NUP7 481 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-225ENST00000556513 GBF1Q92538 1859 aa11.83□□□□□ -0.52
HNRNPC-225ENST00000556513 UMODL1Q5DID0 1318 aa11.83□□□□□ -0.52
HNRNPC-225ENST00000556513 STXBP3O00186 592 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms