RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 CELF3Q5SZQ8 465 aaKnown RBP19.76■□□□□ 0.75
CHMP1A-208ENST00000550102 CCDC12Q8WUD4 166 aaPredicted RBP19.76■□□□□ 0.75
CHMP1A-208ENST00000550102 RNF26Q9BY78 433 aaPredicted RBP19.76■□□□□ 0.75
CHMP1A-208ENST00000550102 ALDH8A1Q9H2A2 487 aaPredicted RBP19.76■□□□□ 0.75
CHMP1A-208ENST00000550102 NCOA5Q9HCD5 579 aaKnown RBP19.76■□□□□ 0.75
CHMP1A-208ENST00000550102 LAMA3Q16787 3333 aa19.76■□□□□ 0.75
CHMP1A-208ENST00000550102 PRPF3O43395 683 aaKnown RBP19.75■□□□□ 0.75
CHMP1A-208ENST00000550102 B4GALT4O60513 344 aa19.75■□□□□ 0.75
CHMP1A-208ENST00000550102 TIMP1P01033 207 aa19.75■□□□□ 0.75
CHMP1A-208ENST00000550102 IFNAR1P17181 557 aa19.75■□□□□ 0.75
CHMP1A-208ENST00000550102 CCT2P78371 535 aaKnown RBP19.75■□□□□ 0.75
CHMP1A-208ENST00000550102 FPGSQ05932 587 aa19.75■□□□□ 0.75
CHMP1A-208ENST00000550102 NBPF20Q3BBV1 942 aa19.75■□□□□ 0.75
CHMP1A-208ENST00000550102 MYSM1Q5VVJ2 828 aa19.75■□□□□ 0.75
CHMP1A-208ENST00000550102 NFRKBQ6P4R8 1299 aa19.75■□□□□ 0.75
CHMP1A-208ENST00000550102 NLRX1Q86UT6 975 aa19.75■□□□□ 0.75
CHMP1A-208ENST00000550102 PHKBQ93100 1093 aa19.75■□□□□ 0.75
CHMP1A-208ENST00000550102 ZNF274Q96GC6 653 aaPredicted RBP19.75■□□□□ 0.75
CHMP1A-208ENST00000550102 SPATA33Q96N06 139 aa19.75■□□□□ 0.75
CHMP1A-208ENST00000550102 TRPV6Q9H1D0 765 aa19.75■□□□□ 0.75
CHMP1A-208ENST00000550102 RTEL1Q9NZ71 1219 aa19.75■□□□□ 0.75
CHMP1A-208ENST00000550102 PCDHA6Q9UN73 950 aa19.75■□□□□ 0.75
CHMP1A-208ENST00000550102 PCDHA8Q9Y5H6 950 aa19.75■□□□□ 0.75
CHMP1A-208ENST00000550102 ESYT2A0FGR8 921 aa19.74■□□□□ 0.75
CHMP1A-208ENST00000550102 SMCO2A6NFE2 343 aa19.74■□□□□ 0.75
CHMP1A-208ENST00000550102 SPATA31C2B4DYI2 1134 aa19.74■□□□□ 0.75
CHMP1A-208ENST00000550102 SORBS3O60504 671 aa19.74■□□□□ 0.75
CHMP1A-208ENST00000550102 FOSP01100 380 aaPredicted RBP19.74■□□□□ 0.75
CHMP1A-208ENST00000550102 HOXD8P13378 290 aaPredicted RBP19.74■□□□□ 0.75
CHMP1A-208ENST00000550102 SP2Q02086 613 aa19.74■□□□□ 0.75
CHMP1A-208ENST00000550102 SEMA3FQ13275 785 aa19.74■□□□□ 0.75
CHMP1A-208ENST00000550102 AP3B2Q13367 1082 aa19.74■□□□□ 0.75
CHMP1A-208ENST00000550102 NEDD9Q14511 834 aa19.74■□□□□ 0.75
CHMP1A-208ENST00000550102 NTRK3Q16288 839 aa19.74■□□□□ 0.75
CHMP1A-208ENST00000550102 GPRASP2Q96D09 838 aa19.74■□□□□ 0.75
CHMP1A-208ENST00000550102 CDHR1Q96JP9 859 aa19.74■□□□□ 0.75
CHMP1A-208ENST00000550102 SLC26A6Q9BXS9 759 aa19.74■□□□□ 0.75
CHMP1A-208ENST00000550102 HIPK3Q9H422 1215 aa19.74■□□□□ 0.75
CHMP1A-208ENST00000550102 MLXIPQ9HAP2 919 aa19.74■□□□□ 0.75
CHMP1A-208ENST00000550102 CPLX1O14810 134 aa19.73■□□□□ 0.75
CHMP1A-208ENST00000550102 F2P00734 622 aa19.73■□□□□ 0.75
CHMP1A-208ENST00000550102 SUPT20HL2P0C7V6 817 aa19.73■□□□□ 0.75
CHMP1A-208ENST00000550102 ZNF286BP0CG31 522 aa19.73■□□□□ 0.75
CHMP1A-208ENST00000550102 CHMP4BP1P59074 171 aa19.73■□□□□ 0.75
CHMP1A-208ENST00000550102 PTPN11Q06124 597 aaPredicted RBP19.73■□□□□ 0.75
CHMP1A-208ENST00000550102 PKN1Q16512 942 aa19.73■□□□□ 0.75
CHMP1A-208ENST00000550102 HSDL1Q3SXM5 330 aa19.73■□□□□ 0.75
CHMP1A-208ENST00000550102 METTL7BQ6UX53 244 aa19.73■□□□□ 0.75
CHMP1A-208ENST00000550102 TRIM22Q8IYM9 498 aa19.73■□□□□ 0.75
CHMP1A-208ENST00000550102 IL17RAQ96F46 866 aa19.73■□□□□ 0.75
CHMP1A-208ENST00000550102 KATNAL1Q9BW62 490 aa19.73■□□□□ 0.75
CHMP1A-208ENST00000550102 ANO3Q9BYT9 981 aa19.73■□□□□ 0.75
CHMP1A-208ENST00000550102 PPP1R12CQ9BZL4 782 aa19.73■□□□□ 0.75
CHMP1A-208ENST00000550102 LAMA2P24043 3122 aaKnown RBP19.73■□□□□ 0.75
CHMP1A-208ENST00000550102 TRIP12Q14669 1992 aaPredicted RBP19.72■□□□□ 0.75
CHMP1A-208ENST00000550102 NOP56O00567 594 aaKnown RBP19.72■□□□□ 0.75
CHMP1A-208ENST00000550102 LRIT3Q3SXY7 679 aa19.72■□□□□ 0.75
CHMP1A-208ENST00000550102 MFSD5Q6N075 450 aa19.72■□□□□ 0.75
CHMP1A-208ENST00000550102 CPLX2Q6PUV4 134 aaKnown RBP19.72■□□□□ 0.75
CHMP1A-208ENST00000550102 GIMAP8Q8ND71 665 aaPredicted RBP19.72■□□□□ 0.75
CHMP1A-208ENST00000550102 CCDC148Q8NFR7 591 aa19.72■□□□□ 0.75
CHMP1A-208ENST00000550102 NOC4LQ9BVI4 516 aaKnown RBP19.72■□□□□ 0.75
CHMP1A-208ENST00000550102 TRMT13Q9NUP7 481 aaKnown RBP19.72■□□□□ 0.75
CHMP1A-208ENST00000550102 PPFIA3O75145 1194 aa19.71■□□□□ 0.75
CHMP1A-208ENST00000550102 PPFIA4O75335 1185 aa19.71■□□□□ 0.75
CHMP1A-208ENST00000550102 ITGB5P18084 799 aa19.71■□□□□ 0.75
CHMP1A-208ENST00000550102 CLK2P49760 499 aaKnown RBP19.71■□□□□ 0.75
CHMP1A-208ENST00000550102 STK3Q13188 491 aa19.71■□□□□ 0.75
CHMP1A-208ENST00000550102 PPIGQ13427 754 aaKnown RBP eCLIP19.71■□□□□ 0.757e-7■■■□□ 15.5
CHMP1A-208ENST00000550102 MTMR1Q13613 665 aa19.71■□□□□ 0.75
CHMP1A-208ENST00000550102 ANKRD1Q15327 319 aa19.71■□□□□ 0.75
CHMP1A-208ENST00000550102 MCTP2Q6DN12 878 aa19.71■□□□□ 0.75
CHMP1A-208ENST00000550102 REXO1Q8N1G1 1221 aaKnown RBP19.71■□□□□ 0.75
CHMP1A-208ENST00000550102 TMEM199Q8N511 208 aa19.71■□□□□ 0.75
CHMP1A-208ENST00000550102 KAT2BQ92831 832 aa19.71■□□□□ 0.75
CHMP1A-208ENST00000550102 PGBD1Q96JS3 809 aa19.71■□□□□ 0.75
CHMP1A-208ENST00000550102 SENP7Q9BQF6 1050 aa19.71■□□□□ 0.75
CHMP1A-208ENST00000550102 LARP6Q9BRS8 491 aaKnown RBP19.71■□□□□ 0.75
CHMP1A-208ENST00000550102 ZMYND12Q9H0C1 365 aa19.71■□□□□ 0.75
CHMP1A-208ENST00000550102 C6orf50Q9HD87 102 aa19.71■□□□□ 0.75
CHMP1A-208ENST00000550102 UBIAD1Q9Y5Z9 338 aa19.71■□□□□ 0.75
CHMP1A-208ENST00000550102 SCN5AQ14524 2016 aa19.71■□□□□ 0.75
CHMP1A-208ENST00000550102 KAT6AQ92794 2004 aa19.71■□□□□ 0.75
CHMP1A-208ENST00000550102 GNA11P29992 359 aa19.7■□□□□ 0.74
CHMP1A-208ENST00000550102 CYP2C18P33260 490 aa19.7■□□□□ 0.74
CHMP1A-208ENST00000550102 SREBF1P36956 1147 aa19.7■□□□□ 0.74
CHMP1A-208ENST00000550102 PSEN2P49810 448 aa19.7■□□□□ 0.74
CHMP1A-208ENST00000550102 SSRP1Q08945 709 aaKnown RBP19.7■□□□□ 0.74
CHMP1A-208ENST00000550102 MFSD10Q14728 455 aa19.7■□□□□ 0.74
CHMP1A-208ENST00000550102 CYFIP1Q7L576 1253 aa19.7■□□□□ 0.74
CHMP1A-208ENST00000550102 SESTD1Q86VW0 696 aa19.7■□□□□ 0.74
CHMP1A-208ENST00000550102 PPP1R13LQ8WUF5 828 aa19.7■□□□□ 0.74
CHMP1A-208ENST00000550102 TMEM260Q9NX78 707 aa19.7■□□□□ 0.74
CHMP1A-208ENST00000550102 NOD1Q9Y239 953 aa19.7■□□□□ 0.74
CHMP1A-208ENST00000550102 SOX1O00570 391 aaPredicted RBP19.69■□□□□ 0.74
CHMP1A-208ENST00000550102 CDKL5O76039 1030 aa19.69■□□□□ 0.74
CHMP1A-208ENST00000550102 SEC24BO95487 1268 aa19.69■□□□□ 0.74
CHMP1A-208ENST00000550102 EPHB4P54760 987 aa19.69■□□□□ 0.74
CHMP1A-208ENST00000550102 SHHQ15465 462 aa19.69■□□□□ 0.74
CHMP1A-208ENST00000550102 C9orf50Q5SZB4 431 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms