RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 KCNA5P22460 613 aa13.8□□□□□ -0.2
GABPB1-206ENST00000543881 MRPL12P52815 198 aaKnown RBP13.8□□□□□ -0.2
GABPB1-206ENST00000543881 LEXMQ3ZCV2 418 aa13.8□□□□□ -0.2
GABPB1-206ENST00000543881 SESTD1Q86VW0 696 aa13.8□□□□□ -0.2
GABPB1-206ENST00000543881 FBXO11Q86XK2 927 aa13.8□□□□□ -0.2
GABPB1-206ENST00000543881 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.8□□□□□ -0.2
GABPB1-206ENST00000543881 AFG1LQ8WV93 481 aa13.8□□□□□ -0.2
GABPB1-206ENST00000543881 RUFY2Q8WXA3 655 aa13.8□□□□□ -0.2
GABPB1-206ENST00000543881 DHX38Q92620 1227 aaKnown RBP13.8□□□□□ -0.2
GABPB1-206ENST00000543881 MTMR8Q96EF0 704 aa13.8□□□□□ -0.2
GABPB1-206ENST00000543881 U3KPZ7 1027 aaPredicted RBP13.8□□□□□ -0.2
GABPB1-206ENST00000543881 ABHD14A-ACY1A0A1B0GW23 586 aa13.8□□□□□ -0.2
GABPB1-206ENST00000543881 PALM3A6NDB9 673 aaPredicted RBP13.8□□□□□ -0.2
GABPB1-206ENST00000543881 E7EWF7 191 aa13.8□□□□□ -0.2
GABPB1-206ENST00000543881 MMP3P08254 477 aa13.8□□□□□ -0.2
GABPB1-206ENST00000543881 CKBP12277 381 aa13.8□□□□□ -0.2
GABPB1-206ENST00000543881 SSTR3P32745 418 aaPredicted RBP13.8□□□□□ -0.2
GABPB1-206ENST00000543881 RBL2Q08999 1139 aa13.8□□□□□ -0.2
GABPB1-206ENST00000543881 TCTN1Q2MV58 587 aa13.8□□□□□ -0.2
GABPB1-206ENST00000543881 CCDC62Q6P9F0 684 aa13.8□□□□□ -0.2
GABPB1-206ENST00000543881 MAF1Q9H063 256 aa13.8□□□□□ -0.2
GABPB1-206ENST00000543881 MRPL11Q9Y3B7 192 aaKnown RBP13.8□□□□□ -0.2
GABPB1-206ENST00000543881 MYH6P13533 1939 aa13.79□□□□□ -0.2
GABPB1-206ENST00000543881 PIEZO1Q92508 2521 aa13.79□□□□□ -0.2
GABPB1-206ENST00000543881 IL9P15248 144 aa13.79□□□□□ -0.2
GABPB1-206ENST00000543881 TRDNQ13061 729 aa13.79□□□□□ -0.2
GABPB1-206ENST00000543881 IKBKEQ14164 716 aa13.79□□□□□ -0.2
GABPB1-206ENST00000543881 PTCRAQ6ISU1 281 aaPredicted RBP13.79□□□□□ -0.2
GABPB1-206ENST00000543881 FAM117BQ6P1L5 589 aa13.79□□□□□ -0.2
GABPB1-206ENST00000543881 CHST3Q7LGC8 479 aa13.79□□□□□ -0.2
GABPB1-206ENST00000543881 MCF2L2Q86YR7 1114 aa13.79□□□□□ -0.2
GABPB1-206ENST00000543881 NSUN6Q8TEA1 469 aaKnown RBP13.79□□□□□ -0.2
GABPB1-206ENST00000543881 KAT2BQ92831 832 aa13.79□□□□□ -0.2
GABPB1-206ENST00000543881 MAP4K1Q92918 833 aa13.79□□□□□ -0.2
GABPB1-206ENST00000543881 UIMC1Q96RL1 719 aa13.79□□□□□ -0.2
GABPB1-206ENST00000543881 IFIT3O14879 490 aaKnown RBP13.78□□□□□ -0.2
GABPB1-206ENST00000543881 EFCAB14O75071 495 aa13.78□□□□□ -0.2
GABPB1-206ENST00000543881 CFBP00751 764 aa13.78□□□□□ -0.2
GABPB1-206ENST00000543881 GH1P01241 217 aa13.78□□□□□ -0.2
GABPB1-206ENST00000543881 ALADP13716 330 aa13.78□□□□□ -0.2
GABPB1-206ENST00000543881 HSD17B4P51659 736 aa13.78□□□□□ -0.2
GABPB1-206ENST00000543881 ANTXR2P58335 489 aa13.78□□□□□ -0.2
GABPB1-206ENST00000543881 GRM4Q14833 912 aa13.78□□□□□ -0.2
GABPB1-206ENST00000543881 LY6KQ17RY6 165 aa13.78□□□□□ -0.2
GABPB1-206ENST00000543881 SEPT14Q6ZU15 432 aa13.78□□□□□ -0.2
GABPB1-206ENST00000543881 RMDN3Q96TC7 470 aa13.78□□□□□ -0.2
GABPB1-206ENST00000543881 AMNQ9BXJ7 453 aa13.78□□□□□ -0.2
GABPB1-206ENST00000543881 GTF2IRD1Q9UHL9 959 aa13.78□□□□□ -0.2
GABPB1-206ENST00000543881 RBAK-RBAKDNI3L0D1 243 aa13.77□□□□□ -0.21
GABPB1-206ENST00000543881 ZBTB5O15062 677 aa13.77□□□□□ -0.21
GABPB1-206ENST00000543881 CYTH3O43739 400 aa13.77□□□□□ -0.21
GABPB1-206ENST00000543881 EIF2AK2P19525 551 aaKnown RBP13.77□□□□□ -0.21
GABPB1-206ENST00000543881 CASTP20810 708 aaKnown RBP13.77□□□□□ -0.21
GABPB1-206ENST00000543881 GHRHRQ02643 423 aa13.77□□□□□ -0.21
GABPB1-206ENST00000543881 ARHGAP1Q07960 439 aa13.77□□□□□ -0.21
GABPB1-206ENST00000543881 TROAPQ12815 778 aa13.77□□□□□ -0.21
GABPB1-206ENST00000543881 COL9A3Q14050 684 aaPredicted RBP13.77□□□□□ -0.21
GABPB1-206ENST00000543881 STXBP2Q15833 593 aa13.77□□□□□ -0.21
GABPB1-206ENST00000543881 CSPP1Q1MSJ5 1256 aa13.77□□□□□ -0.21
GABPB1-206ENST00000543881 C7orf31Q8N865 590 aa13.77□□□□□ -0.21
GABPB1-206ENST00000543881 FBXO22Q8NEZ5 403 aa13.77□□□□□ -0.21
GABPB1-206ENST00000543881 NCOA7Q8NI08 942 aa13.77□□□□□ -0.21
GABPB1-206ENST00000543881 IWS1Q96ST2 819 aa13.77□□□□□ -0.21
GABPB1-206ENST00000543881 C17orf80Q9BSJ5 609 aa13.77□□□□□ -0.21
GABPB1-206ENST00000543881 RIOX1Q9H6W3 641 aa13.77□□□□□ -0.21
GABPB1-206ENST00000543881 PXMP2Q9NR77 195 aa13.77□□□□□ -0.21
GABPB1-206ENST00000543881 HDAC6Q9UBN7 1215 aa13.77□□□□□ -0.21
GABPB1-206ENST00000543881 RBM8AQ9Y5S9 174 aaKnown RBP13.77□□□□□ -0.21
GABPB1-206ENST00000543881 KIAA1217Q5T5P2 1943 aa13.76□□□□□ -0.21
GABPB1-206ENST00000543881 GRXCR2A6NFK2 248 aa13.76□□□□□ -0.21
GABPB1-206ENST00000543881 DGKDQ16760 1214 aa13.76□□□□□ -0.21
GABPB1-206ENST00000543881 ARHGEF16Q5VV41 709 aa13.76□□□□□ -0.21
GABPB1-206ENST00000543881 RALYLQ86SE5 291 aaKnown RBP13.76□□□□□ -0.21
GABPB1-206ENST00000543881 MB21D2Q8IYB1 491 aaPredicted RBP13.76□□□□□ -0.21
GABPB1-206ENST00000543881 IGDCC4Q8TDY8 1250 aa13.76□□□□□ -0.21
GABPB1-206ENST00000543881 PIGSQ96S52 555 aa13.76□□□□□ -0.21
GABPB1-206ENST00000543881 ALG1Q9BT22 464 aa13.76□□□□□ -0.21
GABPB1-206ENST00000543881 INSL6Q9Y581 213 aa13.76□□□□□ -0.21
GABPB1-206ENST00000543881 PCDHA1Q9Y5I3 950 aa13.76□□□□□ -0.21
GABPB1-206ENST00000543881 NR3C2P08235 984 aa13.75□□□□□ -0.21
GABPB1-206ENST00000543881 HOXA13P31271 388 aaPredicted RBP13.75□□□□□ -0.21
GABPB1-206ENST00000543881 PSEN2P49810 448 aa13.75□□□□□ -0.21
GABPB1-206ENST00000543881 MRE11P49959 708 aa13.75□□□□□ -0.21
GABPB1-206ENST00000543881 PTK7Q13308 1070 aa13.75□□□□□ -0.21
GABPB1-206ENST00000543881 WTAPQ15007 396 aa13.75□□□□□ -0.21
GABPB1-206ENST00000543881 TRIM71Q2Q1W2 868 aaKnown RBP13.75□□□□□ -0.21
GABPB1-206ENST00000543881 PUS10Q3MIT2 529 aaKnown RBP13.75□□□□□ -0.21
GABPB1-206ENST00000543881 ZNF618Q5T7W0 954 aa13.75□□□□□ -0.21
GABPB1-206ENST00000543881 TRAF7Q6Q0C0 670 aa13.75□□□□□ -0.21
GABPB1-206ENST00000543881 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.75□□□□□ -0.212e-8■■□□□ 11.7
GABPB1-206ENST00000543881 SKAP1Q86WV1 359 aa13.75□□□□□ -0.21
GABPB1-206ENST00000543881 HOMER1Q86YM7 354 aa13.75□□□□□ -0.21
GABPB1-206ENST00000543881 MRPL38Q96DV4 380 aaKnown RBP13.75□□□□□ -0.21
GABPB1-206ENST00000543881 KATNAL1Q9BW62 490 aa13.75□□□□□ -0.21
GABPB1-206ENST00000543881 DDX41Q9UJV9 622 aaKnown RBP13.75□□□□□ -0.21
GABPB1-206ENST00000543881 BAZ2BQ9UIF8 2168 aaKnown RBP13.75□□□□□ -0.21
GABPB1-206ENST00000543881 ERICH2A1L162 156 aa13.74□□□□□ -0.21
GABPB1-206ENST00000543881 H3BQ06 376 aaPredicted RBP13.74□□□□□ -0.21
GABPB1-206ENST00000543881 LGR5O75473 907 aa13.74□□□□□ -0.21
GABPB1-206ENST00000543881 EIF3JO75822 258 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms