RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 RUBCNLQ9H714 662 aa5.35□□□□□ -1.55
C11orf54-213ENST00000533585 ATP6V0A4Q9HBG4 840 aa5.35□□□□□ -1.55
C11orf54-213ENST00000533585 GPAMQ9HCL2 828 aa5.35□□□□□ -1.55
C11orf54-213ENST00000533585 ANKEF1Q9NU02 776 aa5.35□□□□□ -1.55
C11orf54-213ENST00000533585 NOC2LQ9Y3T9 749 aaKnown RBP5.35□□□□□ -1.55
C11orf54-213ENST00000533585 ZNF451Q9Y4E5 1061 aa5.35□□□□□ -1.55
C11orf54-213ENST00000533585 PCDHA8Q9Y5H6 950 aa5.35□□□□□ -1.55
C11orf54-213ENST00000533585 PTPDC1A2A3K4 754 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 SYNDIG1LA6NDD5 238 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 FAM177BA6PVY3 158 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 RHPN2P1A8MT19 583 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 H3BML4 177 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 EIF3FO00303 357 aaPredicted RBP5.34□□□□□ -1.55
C11orf54-213ENST00000533585 WNT7AO00755 349 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 TOR1BO14657 336 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 AREL1O15033 823 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 CSTBP04080 98 aaKnown RBP5.34□□□□□ -1.55
C11orf54-213ENST00000533585 HNRNPCP07910 306 aaKnown RBP eCLIP5.34□□□□□ -1.55
C11orf54-213ENST00000533585 DHRS4L1P0CG22 281 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 ESRRAP11474 423 aaPredicted RBP5.34□□□□□ -1.55
C11orf54-213ENST00000533585 PTPRAP18433 802 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 HOXD12P35452 270 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 GGCXP38435 758 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 TSPAN7P41732 249 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 PIK3CBP42338 1070 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 TECP42680 631 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 GPR3P46089 330 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 CLK1P49759 484 aaKnown RBP5.34□□□□□ -1.55
C11orf54-213ENST00000533585 ADKP55263 362 aaKnown RBP5.34□□□□□ -1.55
C11orf54-213ENST00000533585 ETF1P62495 437 aaKnown RBP5.34□□□□□ -1.55
C11orf54-213ENST00000533585 PFKPQ01813 784 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 ROR1Q01973 937 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 CCNG2Q16589 344 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 TMEM177Q53S58 311 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 SLC45A4Q5BKX6 768 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 FKBP15Q5T1M5 1219 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 SLC6A19Q695T7 634 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 SWSAP1Q6NVH7 229 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 KCNT2Q6UVM3 1135 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 TMCO3Q6UWJ1 677 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 SPOCD1Q6ZMY3 1216 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 HFE2Q6ZVN8 426 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 HSCBQ8IWL3 235 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 KIAA0319LQ8IZA0 1049 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 LSMEM1Q8N8F7 131 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 SLC30A5Q8TAD4 765 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 TRAPPC12Q8WVT3 735 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 BHMTQ93088 406 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 ZNF496Q96IT1 587 aaPredicted RBP5.34□□□□□ -1.55
C11orf54-213ENST00000533585 FMNL2Q96PY5 1086 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 MYCBPQ99417 103 aaPredicted RBP5.34□□□□□ -1.55
C11orf54-213ENST00000533585 KLF16Q9BXK1 252 aaPredicted RBP5.34□□□□□ -1.55
C11orf54-213ENST00000533585 B3GNT5Q9BYG0 378 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 MKRN2Q9H000 416 aaKnown RBP5.34□□□□□ -1.55
C11orf54-213ENST00000533585 DMRT3Q9NQL9 472 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 ITM2CQ9NQX7 267 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 OXSMQ9NWU1 459 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 NKIRAS2Q9NYR9 191 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 H2AFY2Q9P0M6 372 aaPredicted RBP5.34□□□□□ -1.55
C11orf54-213ENST00000533585 CCDC39Q9UFE4 941 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 SOX13Q9UN79 622 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 MAGED2Q9UNF1 606 aaPredicted RBP5.34□□□□□ -1.55
C11orf54-213ENST00000533585 TMEM98Q9Y2Y6 226 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 COQ6Q9Y2Z9 468 aa5.34□□□□□ -1.55
C11orf54-213ENST00000533585 PABPN1LA6NDY0 278 aaKnown RBP5.33□□□□□ -1.56
C11orf54-213ENST00000533585 FAM205CA6NFA0 338 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 DCDC2CA8MYV0 355 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 ADAMTS3O15072 1205 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 KPNA5O15131 536 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 B3GALT2O43825 422 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 UBXN7O94888 489 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 UBOX5O94941 541 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 DDX58O95786 925 aaKnown RBP5.33□□□□□ -1.56
C11orf54-213ENST00000533585 SRGAP2CP0DJJ0 459 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 ITGA4P13612 1032 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 CD247P20963 164 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 ECI1P42126 302 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 CTSOP43234 321 aaPredicted RBP5.33□□□□□ -1.56
C11orf54-213ENST00000533585 CLNS1AP54105 237 aaKnown RBP5.33□□□□□ -1.56
C11orf54-213ENST00000533585 NAP1L1P55209 391 aaKnown RBP5.33□□□□□ -1.56
C11orf54-213ENST00000533585 HNRNPUQ00839 825 aaKnown RBP eCLIP5.33□□□□□ -1.56
C11orf54-213ENST00000533585 WASHC5Q12768 1159 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 IKBKEQ14164 716 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 PRSS53Q2L4Q9 553 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 FAM209BQ5JX69 171 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 GPATCH4Q5T3I0 446 aaKnown RBP5.33□□□□□ -1.56
C11orf54-213ENST00000533585 CCDC30Q5VVM6 783 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 LYSMD3Q7Z3D4 306 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 C7orf61Q8IZ16 206 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 ARHGEF39Q8N4T4 335 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 EFHBQ8N7U6 833 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 FRS2Q8WU20 508 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 LMBR1Q8WVP7 490 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 LRTOMTQ8WZ04 291 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 HVCN1Q96D96 273 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 MVB12AQ96EY5 273 aa5.33□□□□□ -1.56
C11orf54-213ENST00000533585 RSRC1Q96IZ7 334 aaKnown RBP5.33□□□□□ -1.56
C11orf54-213ENST00000533585 ZMAT2Q96NC0 199 aaKnown RBP5.33□□□□□ -1.56
C11orf54-213ENST00000533585 TSEN34Q9BSV6 310 aaKnown RBP5.33□□□□□ -1.56
C11orf54-213ENST00000533585 TRIT1Q9H3H1 467 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms