RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 RBPJLQ9UBG7 517 aa10.08□□□□□ -0.8
CDC27-208ENST00000532575 NOB1Q9ULX3 412 aaKnown RBP10.08□□□□□ -0.8
CDC27-208ENST00000532575 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.08□□□□□ -0.8
CDC27-208ENST00000532575 MSCO60682 206 aa10.07□□□□□ -0.8
CDC27-208ENST00000532575 HLA-DOAP06340 250 aa10.07□□□□□ -0.8
CDC27-208ENST00000532575 EIF2AK2P19525 551 aaKnown RBP10.07□□□□□ -0.8
CDC27-208ENST00000532575 MAPK1P28482 360 aa10.07□□□□□ -0.8
CDC27-208ENST00000532575 HYAL2Q12891 473 aa10.07□□□□□ -0.8
CDC27-208ENST00000532575 G3BP1Q13283 466 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDC27-208ENST00000532575 MTX1Q13505 466 aa10.07□□□□□ -0.8
CDC27-208ENST00000532575 LRRC26Q2I0M4 334 aa10.07□□□□□ -0.8
CDC27-208ENST00000532575 NAA16Q6N069 864 aaPredicted RBP10.07□□□□□ -0.8
CDC27-208ENST00000532575 LINC00114Q6XXX2 140 aa10.07□□□□□ -0.8
CDC27-208ENST00000532575 GPR142Q7Z601 462 aa10.07□□□□□ -0.8
CDC27-208ENST00000532575 METTL16Q86W50 562 aaKnown RBP10.07□□□□□ -0.8
CDC27-208ENST00000532575 SH3RF3Q8TEJ3 882 aaPredicted RBP10.07□□□□□ -0.8
CDC27-208ENST00000532575 SNX29Q8TEQ0 813 aa10.07□□□□□ -0.8
CDC27-208ENST00000532575 TGFBRAP1Q8WUH2 860 aa10.07□□□□□ -0.8
CDC27-208ENST00000532575 NUDT8Q8WV74 236 aa10.07□□□□□ -0.8
CDC27-208ENST00000532575 EDC3Q96F86 508 aaKnown RBP10.07□□□□□ -0.8
CDC27-208ENST00000532575 MEIS3Q99687 375 aa10.07□□□□□ -0.8
CDC27-208ENST00000532575 LPIN3Q9BQK8 851 aa10.07□□□□□ -0.8
CDC27-208ENST00000532575 KANSL3Q9P2N6 904 aa10.07□□□□□ -0.8
CDC27-208ENST00000532575 PRKAG2Q9UGJ0 569 aa10.07□□□□□ -0.8
CDC27-208ENST00000532575 MKL2Q9ULH7 1088 aa10.07□□□□□ -0.8
CDC27-208ENST00000532575 RABGAP1Q9Y3P9 1069 aa10.07□□□□□ -0.8
CDC27-208ENST00000532575 CUL9Q8IWT3 2517 aa10.06□□□□□ -0.8
CDC27-208ENST00000532575 PTPRFP10586 1907 aa10.06□□□□□ -0.8
CDC27-208ENST00000532575 PHIPQ8WWQ0 1821 aa10.06□□□□□ -0.8
CDC27-208ENST00000532575 GPR182O15218 404 aa10.06□□□□□ -0.8
CDC27-208ENST00000532575 KIF4AO95239 1232 aa10.06□□□□□ -0.8
CDC27-208ENST00000532575 CES1P23141 567 aa10.06□□□□□ -0.8
CDC27-208ENST00000532575 CCND3P30281 292 aaPredicted RBP10.06□□□□□ -0.8
CDC27-208ENST00000532575 ELMSAN1Q6PJG2 1045 aa10.06□□□□□ -0.8
CDC27-208ENST00000532575 SND1Q7KZF4 910 aaKnown RBP eCLIP10.06□□□□□ -0.8
CDC27-208ENST00000532575 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.06□□□□□ -0.8
CDC27-208ENST00000532575 ARHGAP45Q92619 1136 aa10.06□□□□□ -0.8
CDC27-208ENST00000532575 SCARF2Q96GP6 870 aaPredicted RBP10.06□□□□□ -0.8
CDC27-208ENST00000532575 PAGR1Q9BTK6 254 aa10.06□□□□□ -0.8
CDC27-208ENST00000532575 SENP6Q9GZR1 1112 aaPredicted RBP10.06□□□□□ -0.8
CDC27-208ENST00000532575 AATFQ9NY61 560 aaKnown RBP eCLIP10.06□□□□□ -0.8
CDC27-208ENST00000532575 FRRS1LQ9P0K9 344 aa10.06□□□□□ -0.8
CDC27-208ENST00000532575 SLC15A5A6NIM6 579 aa10.05□□□□□ -0.8
CDC27-208ENST00000532575 PHACTR2O75167 634 aa10.05□□□□□ -0.8
CDC27-208ENST00000532575 MCAMP43121 646 aa10.05□□□□□ -0.8
CDC27-208ENST00000532575 USP14P54578 494 aa10.05□□□□□ -0.8
CDC27-208ENST00000532575 CCL14Q16627 93 aa10.05□□□□□ -0.8
CDC27-208ENST00000532575 CCDC158Q5M9N0 1113 aa10.05□□□□□ -0.8
CDC27-208ENST00000532575 PI16Q6UXB8 463 aa10.05□□□□□ -0.8
CDC27-208ENST00000532575 TMC7Q7Z402 723 aa10.05□□□□□ -0.8
CDC27-208ENST00000532575 CERS3Q8IU89 383 aa10.05□□□□□ -0.8
CDC27-208ENST00000532575 MAPKAPK5Q8IW41 473 aa10.05□□□□□ -0.8
CDC27-208ENST00000532575 BEND7Q8N7W2 519 aaPredicted RBP10.05□□□□□ -0.8
CDC27-208ENST00000532575 PORCNQ9H237 461 aa10.05□□□□□ -0.8
CDC27-208ENST00000532575 JPH1Q9HDC5 661 aaPredicted RBP10.05□□□□□ -0.8
CDC27-208ENST00000532575 PRDM6Q9NQX0 595 aa10.05□□□□□ -0.8
CDC27-208ENST00000532575 ZBTB21Q9ULJ3 1066 aa10.05□□□□□ -0.8
CDC27-208ENST00000532575 DOCK3Q8IZD9 2030 aa10.05□□□□□ -0.8
CDC27-208ENST00000532575 FLT1P17948 1338 aa10.05□□□□□ -0.8
CDC27-208ENST00000532575 LOC285556D6RIA3 1793 aa10.04□□□□□ -0.8
CDC27-208ENST00000532575 EREGO14944 169 aa10.04□□□□□ -0.8
CDC27-208ENST00000532575 RGS9O75916 674 aaPredicted RBP10.04□□□□□ -0.8
CDC27-208ENST00000532575 GHRHP01286 108 aa10.04□□□□□ -0.8
CDC27-208ENST00000532575 GNAI2P04899 355 aa10.04□□□□□ -0.8
CDC27-208ENST00000532575 CNGA1P29973 690 aa10.04□□□□□ -0.8
CDC27-208ENST00000532575 ATP2B2Q01814 1243 aa10.04□□□□□ -0.8
CDC27-208ENST00000532575 COL9A3Q14050 684 aaPredicted RBP10.04□□□□□ -0.8
CDC27-208ENST00000532575 TTC39AQ5SRH9 613 aa10.04□□□□□ -0.8
CDC27-208ENST00000532575 WDR78Q5VTH9 848 aa10.04□□□□□ -0.8
CDC27-208ENST00000532575 TRMT2AQ8IZ69 625 aaKnown RBP10.04□□□□□ -0.8
CDC27-208ENST00000532575 ARRDC4Q8NCT1 418 aa10.04□□□□□ -0.8
CDC27-208ENST00000532575 LPAR1Q92633 364 aa10.04□□□□□ -0.8
CDC27-208ENST00000532575 PMEPA1Q969W9 287 aa10.04□□□□□ -0.8
CDC27-208ENST00000532575 C12orf42Q96LP6 360 aa10.04□□□□□ -0.8
CDC27-208ENST00000532575 FEZ1Q99689 392 aa10.04□□□□□ -0.8
CDC27-208ENST00000532575 SMG9Q9H0W8 520 aaKnown RBP10.04□□□□□ -0.8
CDC27-208ENST00000532575 DDX20Q9UHI6 824 aaKnown RBP10.04□□□□□ -0.8
CDC27-208ENST00000532575 SALL4Q9UJQ4 1053 aa10.04□□□□□ -0.8
CDC27-208ENST00000532575 PALD1Q9ULE6 856 aa10.04□□□□□ -0.8
CDC27-208ENST00000532575 DNM1LO00429 736 aa10.03□□□□□ -0.8
CDC27-208ENST00000532575 IPO8O15397 1037 aaKnown RBP10.03□□□□□ -0.8
CDC27-208ENST00000532575 PEX10O60683 326 aa10.03□□□□□ -0.8
CDC27-208ENST00000532575 LILRB5O75023 590 aa10.03□□□□□ -0.8
CDC27-208ENST00000532575 GDF11O95390 407 aa10.03□□□□□ -0.8
CDC27-208ENST00000532575 HOXC6P09630 235 aa10.03□□□□□ -0.8
CDC27-208ENST00000532575 JAG1P78504 1218 aa10.03□□□□□ -0.8
CDC27-208ENST00000532575 DDX60LQ5H9U9 1706 aaKnown RBP10.03□□□□□ -0.8
CDC27-208ENST00000532575 PLD4Q96BZ4 506 aa10.03□□□□□ -0.8
CDC27-208ENST00000532575 DMRTB1Q96MA1 342 aa10.03□□□□□ -0.8
CDC27-208ENST00000532575 GZF1Q9H116 711 aaPredicted RBP10.03□□□□□ -0.8
CDC27-208ENST00000532575 DNAJC18Q9H819 358 aa10.03□□□□□ -0.8
CDC27-208ENST00000532575 GPR108Q9NPR9 543 aa10.03□□□□□ -0.8
CDC27-208ENST00000532575 ALPK3Q96L96 1907 aa10.03□□□□□ -0.8
CDC27-208ENST00000532575 GNB5O14775 395 aa10.02□□□□□ -0.81
CDC27-208ENST00000532575 GH2P01242 217 aa10.02□□□□□ -0.81
CDC27-208ENST00000532575 ATP11AP98196 1134 aa10.02□□□□□ -0.81
CDC27-208ENST00000532575 ORC1Q13415 861 aa10.02□□□□□ -0.81
CDC27-208ENST00000532575 TMED8Q6PL24 325 aaPredicted RBP10.02□□□□□ -0.81
CDC27-208ENST00000532575 LBX2Q6XYB7 198 aa10.02□□□□□ -0.81
CDC27-208ENST00000532575 CATSPERGQ6ZRH7 1159 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms