RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 SEC16BQ96JE7 1060 aa6.61□□□□□ -1.35
NPM1-212ENST00000524204 TCAF1Q9Y4C2 921 aa6.61□□□□□ -1.35
NPM1-212ENST00000524204 PCSK5Q92824 1860 aa6.6□□□□□ -1.35
NPM1-212ENST00000524204 ZNF623O75123 536 aa6.6□□□□□ -1.35
NPM1-212ENST00000524204 CD3EP07766 207 aa6.6□□□□□ -1.35
NPM1-212ENST00000524204 EPHB4P54760 987 aa6.6□□□□□ -1.35
NPM1-212ENST00000524204 PPP2CBP62714 309 aa6.6□□□□□ -1.35
NPM1-212ENST00000524204 PPP2CAP67775 309 aa6.6□□□□□ -1.35
NPM1-212ENST00000524204 FOXE3Q13461 319 aa6.6□□□□□ -1.35
NPM1-212ENST00000524204 SERINC3Q13530 473 aa6.6□□□□□ -1.35
NPM1-212ENST00000524204 PLEKHG4Q58EX7 1191 aa6.6□□□□□ -1.35
NPM1-212ENST00000524204 TDRD10Q5VZ19 366 aaKnown RBP6.6□□□□□ -1.35
NPM1-212ENST00000524204 TMED8Q6PL24 325 aaPredicted RBP6.6□□□□□ -1.35
NPM1-212ENST00000524204 GK5Q6ZS86 529 aa6.6□□□□□ -1.35
NPM1-212ENST00000524204 CEP89Q96ST8 783 aa6.6□□□□□ -1.35
NPM1-212ENST00000524204 PRDM16Q9HAZ2 1276 aa6.6□□□□□ -1.35
NPM1-212ENST00000524204 DDX56Q9NY93 547 aaKnown RBP6.6□□□□□ -1.35
NPM1-212ENST00000524204 GULP1Q9UBP9 304 aa6.6□□□□□ -1.35
NPM1-212ENST00000524204 G3BP2Q9UN86 482 aaKnown RBP6.6□□□□□ -1.35
NPM1-212ENST00000524204 R3HCC1Q9Y3T6 440 aaKnown RBP6.6□□□□□ -1.35
NPM1-212ENST00000524204 ROBO2Q9HCK4 1378 aa6.59□□□□□ -1.35
NPM1-212ENST00000524204 WDR33Q9C0J8 1336 aaKnown RBP6.59□□□□□ -1.35
NPM1-212ENST00000524204 C9orf118A6NHY6 69 aa6.59□□□□□ -1.35
NPM1-212ENST00000524204 NANOS3P60323 173 aaKnown RBP6.59□□□□□ -1.35
NPM1-212ENST00000524204 NOL9Q5SY16 702 aaKnown RBP6.59□□□□□ -1.35
NPM1-212ENST00000524204 CD300LDQ6UXZ3 194 aa6.59□□□□□ -1.35
NPM1-212ENST00000524204 PPFIBP1Q86W92 1011 aa6.59□□□□□ -1.35
NPM1-212ENST00000524204 FIBCD1Q8N539 461 aa6.59□□□□□ -1.35
NPM1-212ENST00000524204 TTLL6Q8N841 843 aa6.59□□□□□ -1.35
NPM1-212ENST00000524204 PRPF38AQ8NAV1 312 aaKnown RBP6.59□□□□□ -1.35
NPM1-212ENST00000524204 RNPC3Q96LT9 517 aaKnown RBP6.59□□□□□ -1.35
NPM1-212ENST00000524204 MCMBPQ9BTE3 642 aa6.59□□□□□ -1.35
NPM1-212ENST00000524204 GP6Q9HCN6 339 aa6.59□□□□□ -1.35
NPM1-212ENST00000524204 COPRSQ9NQ92 184 aa6.59□□□□□ -1.35
NPM1-212ENST00000524204 KCNQ5Q9NR82 932 aa6.59□□□□□ -1.35
NPM1-212ENST00000524204 KBTBD4Q9NVX7 518 aa6.59□□□□□ -1.35
NPM1-212ENST00000524204 BCCIPQ9P287 314 aaKnown RBP eCLIP6.59□□□□□ -1.35
NPM1-212ENST00000524204 HMGB1P1B2RPK0 211 aaPredicted RBP6.58□□□□□ -1.36
NPM1-212ENST00000524204 CDC45O75419 566 aa6.58□□□□□ -1.36
NPM1-212ENST00000524204 EIF3JO75822 258 aaKnown RBP6.58□□□□□ -1.36
NPM1-212ENST00000524204 PWP1Q13610 501 aa6.58□□□□□ -1.36
NPM1-212ENST00000524204 AXDND1Q5T1B0 1012 aaPredicted RBP6.58□□□□□ -1.36
NPM1-212ENST00000524204 WWC2Q6AWC2 1192 aa6.58□□□□□ -1.36
NPM1-212ENST00000524204 PLEKHH3Q7Z736 793 aa6.58□□□□□ -1.36
NPM1-212ENST00000524204 RASGRP4Q8TDF6 673 aa6.58□□□□□ -1.36
NPM1-212ENST00000524204 PCGF6Q9BYE7 350 aa6.58□□□□□ -1.36
NPM1-212ENST00000524204 MEIS3P2A8K0S8 358 aa6.57□□□□□ -1.36
NPM1-212ENST00000524204 NTRK1P04629 796 aa6.57□□□□□ -1.36
NPM1-212ENST00000524204 ZNF28P17035 718 aa6.57□□□□□ -1.36
NPM1-212ENST00000524204 ANKRD39Q53RE8 183 aa6.57□□□□□ -1.36
NPM1-212ENST00000524204 MIIPQ5JXC2 388 aa6.57□□□□□ -1.36
NPM1-212ENST00000524204 ETV3LQ6ZN32 361 aa6.57□□□□□ -1.36
NPM1-212ENST00000524204 ANKS3Q6ZW76 656 aa6.57□□□□□ -1.36
NPM1-212ENST00000524204 SMC5Q8IY18 1101 aa6.57□□□□□ -1.36
NPM1-212ENST00000524204 CCDC146Q8IYE0 955 aa6.57□□□□□ -1.36
NPM1-212ENST00000524204 ZNF408Q9H9D4 720 aa6.57□□□□□ -1.36
NPM1-212ENST00000524204 FHOD1Q9Y613 1164 aa6.57□□□□□ -1.36
NPM1-212ENST00000524204 PURAQ00577 322 aaKnown RBP6.56□□□□□ -1.36
NPM1-212ENST00000524204 PKN3Q6P5Z2 889 aa6.56□□□□□ -1.36
NPM1-212ENST00000524204 LRP10Q7Z4F1 713 aa6.56□□□□□ -1.36
NPM1-212ENST00000524204 RPUSD2Q8IZ73 545 aaKnown RBP6.56□□□□□ -1.36
NPM1-212ENST00000524204 APPBP2Q92624 585 aa6.56□□□□□ -1.36
NPM1-212ENST00000524204 ZNF503Q96F45 646 aa6.56□□□□□ -1.36
NPM1-212ENST00000524204 DEPDC7Q96QD5 511 aa6.56□□□□□ -1.36
NPM1-212ENST00000524204 SPON2Q9BUD6 331 aa6.56□□□□□ -1.36
NPM1-212ENST00000524204 MEGF9Q9H1U4 602 aa6.56□□□□□ -1.36
NPM1-212ENST00000524204 SEMA4AQ9H3S1 761 aa6.56□□□□□ -1.36
NPM1-212ENST00000524204 PCDH18Q9HCL0 1135 aa6.56□□□□□ -1.36
NPM1-212ENST00000524204 TYW1Q9NV66 732 aaKnown RBP6.56□□□□□ -1.36
NPM1-212ENST00000524204 STRIP2Q9ULQ0 834 aa6.56□□□□□ -1.36
NPM1-212ENST00000524204 ZNF451Q9Y4E5 1061 aa6.56□□□□□ -1.36
NPM1-212ENST00000524204 CYP1A1P04798 512 aaPredicted RBP6.55□□□□□ -1.36
NPM1-212ENST00000524204 CD247P20963 164 aa6.55□□□□□ -1.36
NPM1-212ENST00000524204 NASPP49321 788 aaPredicted RBP6.55□□□□□ -1.36
NPM1-212ENST00000524204 POU4F1Q01851 419 aa6.55□□□□□ -1.36
NPM1-212ENST00000524204 ADAM9Q13443 819 aa6.55□□□□□ -1.36
NPM1-212ENST00000524204 SEZ6Q53EL9 994 aa6.55□□□□□ -1.36
NPM1-212ENST00000524204 ARHGEF18Q6ZSZ5 1173 aa6.55□□□□□ -1.36
NPM1-212ENST00000524204 CPNE8Q86YQ8 564 aa6.55□□□□□ -1.36
NPM1-212ENST00000524204 MIB1Q86YT6 1006 aa6.55□□□□□ -1.36
NPM1-212ENST00000524204 KIAA0825Q8IV33 1275 aa6.55□□□□□ -1.36
NPM1-212ENST00000524204 JDP2Q8WYK2 163 aa6.55□□□□□ -1.36
NPM1-212ENST00000524204 YTHDC1Q96MU7 727 aaKnown RBP6.55□□□□□ -1.36
NPM1-212ENST00000524204 ZDHHC15Q96MV8 337 aa6.55□□□□□ -1.36
NPM1-212ENST00000524204 NOL6Q9H6R4 1146 aaKnown RBP6.55□□□□□ -1.36
NPM1-212ENST00000524204 JADE2Q9NQC1 790 aa6.55□□□□□ -1.36
NPM1-212ENST00000524204 FANCLQ9NW38 375 aa6.55□□□□□ -1.36
NPM1-212ENST00000524204 GEMIN8Q9NWZ8 242 aaKnown RBP6.55□□□□□ -1.36
NPM1-212ENST00000524204 SNTG2Q9NY99 539 aa6.55□□□□□ -1.36
NPM1-212ENST00000524204 GABBR1Q9UBS5 961 aa6.55□□□□□ -1.36
NPM1-212ENST00000524204 NARSO43776 548 aaKnown RBP6.54□□□□□ -1.36
NPM1-212ENST00000524204 PDGFRBP09619 1106 aa6.54□□□□□ -1.36
NPM1-212ENST00000524204 EIF4A3P38919 411 aaKnown RBP6.54□□□□□ -1.36
NPM1-212ENST00000524204 PMS1P54277 932 aaKnown RBP6.54□□□□□ -1.36
NPM1-212ENST00000524204 DPTQ07507 201 aa6.54□□□□□ -1.36
NPM1-212ENST00000524204 RAB33AQ14088 237 aa6.54□□□□□ -1.36
NPM1-212ENST00000524204 KRTAP15-1Q3LI76 137 aa6.54□□□□□ -1.36
NPM1-212ENST00000524204 PRAMEF18Q5VWM3 479 aa6.54□□□□□ -1.36
NPM1-212ENST00000524204 RCSD1Q6JBY9 416 aa6.54□□□□□ -1.36
NPM1-212ENST00000524204 ERMP1Q7Z2K6 904 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms