RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 C7orf31Q8N865 590 aa12.55□□□□□ -0.4
PVT1-216ENST00000523068 SLC17A8Q8NDX2 589 aa12.55□□□□□ -0.4
PVT1-216ENST00000523068 CAGE1Q8TC20 777 aa12.55□□□□□ -0.4
PVT1-216ENST00000523068 SCLYQ96I15 445 aa12.55□□□□□ -0.4
PVT1-216ENST00000523068 SPATA33Q96N06 139 aa12.55□□□□□ -0.4
PVT1-216ENST00000523068 MLXIPQ9HAP2 919 aa12.55□□□□□ -0.4
PVT1-216ENST00000523068 F2P00734 622 aa12.54□□□□□ -0.4
PVT1-216ENST00000523068 ACTN1P12814 892 aa12.54□□□□□ -0.4
PVT1-216ENST00000523068 HOXD8P13378 290 aaPredicted RBP12.54□□□□□ -0.4
PVT1-216ENST00000523068 UBA1P22314 1058 aaKnown RBP12.54□□□□□ -0.4
PVT1-216ENST00000523068 ICAM3P32942 547 aa12.54□□□□□ -0.4
PVT1-216ENST00000523068 PSEN2P49810 448 aa12.54□□□□□ -0.4
PVT1-216ENST00000523068 EXOSC10Q01780 885 aaKnown RBP12.54□□□□□ -0.4
PVT1-216ENST00000523068 COL9A3Q14050 684 aaPredicted RBP12.54□□□□□ -0.4
PVT1-216ENST00000523068 NEDD9Q14511 834 aa12.54□□□□□ -0.4
PVT1-216ENST00000523068 PCNX4Q63HM2 1172 aa12.54□□□□□ -0.4
PVT1-216ENST00000523068 APOA5Q6Q788 366 aa12.54□□□□□ -0.4
PVT1-216ENST00000523068 USP17L6PQ6QN14 398 aa12.54□□□□□ -0.4
PVT1-216ENST00000523068 OTOP2Q7RTS6 562 aa12.54□□□□□ -0.4
PVT1-216ENST00000523068 CMTR1Q8N1G2 835 aaKnown RBP12.54□□□□□ -0.4
PVT1-216ENST00000523068 KAT2BQ92831 832 aa12.54□□□□□ -0.4
PVT1-216ENST00000523068 INPP4AQ96PE3 977 aaPredicted RBP12.54□□□□□ -0.4
PVT1-216ENST00000523068 CDX2Q99626 313 aaPredicted RBP12.54□□□□□ -0.4
PVT1-216ENST00000523068 TTYH1Q9H313 450 aaPredicted RBP12.54□□□□□ -0.4
PVT1-216ENST00000523068 PSTPIP2Q9H939 334 aa12.54□□□□□ -0.4
PVT1-216ENST00000523068 MEIS2O14770 477 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 ZBTB43O43298 467 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 FIBPO43427 364 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 PARNO95453 639 aaKnown RBP12.53□□□□□ -0.4
PVT1-216ENST00000523068 IQCF3P0C7M6 154 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 ZNF286BP0CG31 522 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 MRPS9P82933 396 aaKnown RBP12.53□□□□□ -0.4
PVT1-216ENST00000523068 FGD1P98174 961 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 SP2Q02086 613 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 MFSD10Q14728 455 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 RAB30Q15771 203 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 KIAA0753Q2KHM9 967 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 HSDL1Q3SXM5 330 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 NLRX1Q86UT6 975 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 RAB11FIP4Q86YS3 637 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 TEX2Q8IWB9 1127 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 RASEFQ8IZ41 740 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 CCDC82Q8N4S0 544 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 AFAP1L1Q8TED9 768 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 PPP1R13LQ8WUF5 828 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 TIFAQ96CG3 184 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 ALG1Q9BT22 464 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 GTF2IRD1Q9UHL9 959 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 MSRAQ9UJ68 235 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 SLC4A7Q9Y6M7 1214 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 KAT6AQ92794 2004 aa12.53□□□□□ -0.4
PVT1-216ENST00000523068 SPDYE3A6NKU9 549 aa12.52□□□□□ -0.41
PVT1-216ENST00000523068 SPATA31C2B4DYI2 1134 aa12.52□□□□□ -0.41
PVT1-216ENST00000523068 HAS3O00219 553 aa12.52□□□□□ -0.41
PVT1-216ENST00000523068 NOP56O00567 594 aaKnown RBP12.52□□□□□ -0.41
PVT1-216ENST00000523068 REC8O95072 547 aa12.52□□□□□ -0.41
PVT1-216ENST00000523068 RCAN1P53805 252 aa12.52□□□□□ -0.41
PVT1-216ENST00000523068 RTN1Q16799 776 aa12.52□□□□□ -0.41
PVT1-216ENST00000523068 ADCK5Q3MIX3 580 aa12.52□□□□□ -0.41
PVT1-216ENST00000523068 GDF6Q6KF10 455 aaPredicted RBP12.52□□□□□ -0.41
PVT1-216ENST00000523068 HEATR3Q7Z4Q2 680 aa12.52□□□□□ -0.41
PVT1-216ENST00000523068 DEFB128Q7Z7B8 93 aa12.52□□□□□ -0.41
PVT1-216ENST00000523068 GIMAP8Q8ND71 665 aaPredicted RBP12.52□□□□□ -0.41
PVT1-216ENST00000523068 ZFP91Q96JP5 570 aaPredicted RBP12.52□□□□□ -0.41
PVT1-216ENST00000523068 CDHR1Q96JP9 859 aa12.52□□□□□ -0.41
PVT1-216ENST00000523068 SENP7Q9BQF6 1050 aa12.52□□□□□ -0.41
PVT1-216ENST00000523068 PBX4Q9BYU1 374 aa12.52□□□□□ -0.41
PVT1-216ENST00000523068 ZNF576Q9H609 170 aa12.52□□□□□ -0.41
PVT1-216ENST00000523068 EHMT1Q9H9B1 1298 aa12.52□□□□□ -0.41
PVT1-216ENST00000523068 RTEL1Q9NZ71 1219 aa12.52□□□□□ -0.41
PVT1-216ENST00000523068 CXXC1Q9P0U4 656 aaPredicted RBP12.52□□□□□ -0.41
PVT1-216ENST00000523068 HDAC6Q9UBN7 1215 aa12.52□□□□□ -0.41
PVT1-216ENST00000523068 KLF18A0A0U1RQI7 1052 aa12.51□□□□□ -0.41
PVT1-216ENST00000523068 CCDC196A0A1B0GTZ2 297 aa12.51□□□□□ -0.41
PVT1-216ENST00000523068 hCG_1642624A0A1W2PR95 340 aa12.51□□□□□ -0.41
PVT1-216ENST00000523068 GOLGA8AA7E2F4 631 aa12.51□□□□□ -0.41
PVT1-216ENST00000523068 GOLGA8BA8MQT2 603 aa12.51□□□□□ -0.41
PVT1-216ENST00000523068 ZBBXA8MT70 800 aa12.51□□□□□ -0.41
PVT1-216ENST00000523068 GRXCR1A8MXD5 290 aa12.51□□□□□ -0.41
PVT1-216ENST00000523068 H3BRB1 525 aa12.51□□□□□ -0.41
PVT1-216ENST00000523068 hCG_1984214I3L0E3 225 aa12.51□□□□□ -0.41
PVT1-216ENST00000523068 SORBS3O60504 671 aa12.51□□□□□ -0.41
PVT1-216ENST00000523068 FOSL2P15408 326 aa12.51□□□□□ -0.41
PVT1-216ENST00000523068 PPP1R18Q6NYC8 613 aa12.51□□□□□ -0.41
PVT1-216ENST00000523068 METTL7BQ6UX53 244 aa12.51□□□□□ -0.41
PVT1-216ENST00000523068 CYFIP1Q7L576 1253 aa12.51□□□□□ -0.41
PVT1-216ENST00000523068 ZNF713Q8N859 430 aaPredicted RBP12.51□□□□□ -0.41
PVT1-216ENST00000523068 MYLIPQ8WY64 445 aa12.51□□□□□ -0.41
PVT1-216ENST00000523068 GPKOWQ92917 476 aaPredicted RBP eCLIP12.51□□□□□ -0.41
PVT1-216ENST00000523068 KCNB2Q92953 911 aa12.51□□□□□ -0.41
PVT1-216ENST00000523068 TCEANC2Q96MN5 208 aa12.51□□□□□ -0.41
PVT1-216ENST00000523068 USP26Q9BXU7 913 aa12.51□□□□□ -0.41
PVT1-216ENST00000523068 FTOQ9C0B1 505 aaKnown RBP eCLIP12.51□□□□□ -0.41
PVT1-216ENST00000523068 TUT1Q9H6E5 874 aaKnown RBP12.51□□□□□ -0.41
PVT1-216ENST00000523068 CNTNAP5Q8WYK1 1306 aa12.51□□□□□ -0.41
PVT1-216ENST00000523068 BAIAP3O94812 1187 aa12.5□□□□□ -0.41
PVT1-216ENST00000523068 SELPP16109 830 aa12.5□□□□□ -0.41
PVT1-216ENST00000523068 HSPA4P34932 840 aa12.5□□□□□ -0.41
PVT1-216ENST00000523068 PBX2P40425 430 aa12.5□□□□□ -0.41
PVT1-216ENST00000523068 NAPAP54920 295 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms