RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 IQCF3P0C7M6 154 aa29.89■■■□□ 2.38
LAPTM4B-203ENST00000521545 ZNF286BP0CG31 522 aa29.89■■■□□ 2.38
LAPTM4B-203ENST00000521545 UBA1P22314 1058 aaKnown RBP29.89■■■□□ 2.38
LAPTM4B-203ENST00000521545 SP2Q02086 613 aa29.89■■■□□ 2.38
LAPTM4B-203ENST00000521545 COL9A3Q14050 684 aaPredicted RBP29.89■■■□□ 2.38
LAPTM4B-203ENST00000521545 MFSD10Q14728 455 aa29.89■■■□□ 2.38
LAPTM4B-203ENST00000521545 CMTR1Q8N1G2 835 aaKnown RBP29.89■■■□□ 2.38
LAPTM4B-203ENST00000521545 FANCBQ8NB91 859 aa29.89■■■□□ 2.38
LAPTM4B-203ENST00000521545 CAGE1Q8TC20 777 aa29.89■■■□□ 2.38
LAPTM4B-203ENST00000521545 NEK1Q96PY6 1258 aa29.89■■■□□ 2.38
LAPTM4B-203ENST00000521545 HDAC6Q9UBN7 1215 aa29.89■■■□□ 2.38
LAPTM4B-203ENST00000521545 F2P00734 622 aa29.88■■■□□ 2.37
LAPTM4B-203ENST00000521545 KIAA0753Q2KHM9 967 aa29.88■■■□□ 2.37
LAPTM4B-203ENST00000521545 USP17L6PQ6QN14 398 aa29.88■■■□□ 2.37
LAPTM4B-203ENST00000521545 RAB11FIP4Q86YS3 637 aa29.88■■■□□ 2.37
LAPTM4B-203ENST00000521545 VWCEQ96DN2 955 aa29.88■■■□□ 2.37
LAPTM4B-203ENST00000521545 FTOQ9C0B1 505 aaKnown RBP eCLIP29.88■■■□□ 2.372e-10■□□□□ 10.1
LAPTM4B-203ENST00000521545 GTF2IRD1Q9UHL9 959 aa29.88■■■□□ 2.37
LAPTM4B-203ENST00000521545 FRMPD4Q14CM0 1322 aa29.88■■■□□ 2.37
LAPTM4B-203ENST00000521545 PIK3CDO00329 1044 aa29.87■■■□□ 2.37
LAPTM4B-203ENST00000521545 DLL1O00548 723 aa29.87■■■□□ 2.37
LAPTM4B-203ENST00000521545 HOXD8P13378 290 aaPredicted RBP29.87■■■□□ 2.37
LAPTM4B-203ENST00000521545 MRPS9P82933 396 aaKnown RBP29.87■■■□□ 2.37
LAPTM4B-203ENST00000521545 HSDL1Q3SXM5 330 aa29.87■■■□□ 2.37
LAPTM4B-203ENST00000521545 SGMS1Q86VZ5 419 aa29.87■■■□□ 2.37
LAPTM4B-203ENST00000521545 CCDC82Q8N4S0 544 aa29.87■■■□□ 2.37
LAPTM4B-203ENST00000521545 GPKOWQ92917 476 aaPredicted RBP eCLIP29.87■■■□□ 2.37
LAPTM4B-203ENST00000521545 XRRA1Q6P2D8 792 aa29.86■■■□□ 2.37
LAPTM4B-203ENST00000521545 MICU3Q86XE3 530 aa29.86■■■□□ 2.37
LAPTM4B-203ENST00000521545 AFAP1L1Q8TED9 768 aa29.86■■■□□ 2.37
LAPTM4B-203ENST00000521545 CCDC136Q96JN2 1154 aa29.86■■■□□ 2.37
LAPTM4B-203ENST00000521545 INPP4AQ96PE3 977 aaPredicted RBP29.86■■■□□ 2.37
LAPTM4B-203ENST00000521545 PSTPIP2Q9H939 334 aa29.86■■■□□ 2.37
LAPTM4B-203ENST00000521545 RTEL1Q9NZ71 1219 aa29.86■■■□□ 2.37
LAPTM4B-203ENST00000521545 HAS3O00219 553 aa29.85■■■□□ 2.37
LAPTM4B-203ENST00000521545 MEIS2O14770 477 aa29.85■■■□□ 2.37
LAPTM4B-203ENST00000521545 ATP2A2P16615 1042 aaKnown RBP29.85■■■□□ 2.37
LAPTM4B-203ENST00000521545 ICAM3P32942 547 aa29.85■■■□□ 2.37
LAPTM4B-203ENST00000521545 NEDD9Q14511 834 aa29.85■■■□□ 2.37
LAPTM4B-203ENST00000521545 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.85■■■□□ 2.37
LAPTM4B-203ENST00000521545 SLC28A3Q9HAS3 691 aa29.85■■■□□ 2.37
LAPTM4B-203ENST00000521545 SPATA31C2B4DYI2 1134 aa29.84■■■□□ 2.37
LAPTM4B-203ENST00000521545 NOP56O00567 594 aaKnown RBP29.84■■■□□ 2.37
LAPTM4B-203ENST00000521545 FIBPO43427 364 aa29.84■■■□□ 2.37
LAPTM4B-203ENST00000521545 KRT32Q14532 448 aa29.84■■■□□ 2.37
LAPTM4B-203ENST00000521545 TSGA10IPQ3SY00 556 aa29.84■■■□□ 2.37
LAPTM4B-203ENST00000521545 PCNX4Q63HM2 1172 aa29.84■■■□□ 2.37
LAPTM4B-203ENST00000521545 TMTC3Q6ZXV5 915 aa29.84■■■□□ 2.37
LAPTM4B-203ENST00000521545 DHX32Q7L7V1 743 aaKnown RBP29.84■■■□□ 2.37
LAPTM4B-203ENST00000521545 NKX2-4Q9H2Z4 354 aa29.84■■■□□ 2.37
LAPTM4B-203ENST00000521545 SELPP16109 830 aa29.83■■■□□ 2.37
LAPTM4B-203ENST00000521545 CTAGE1Q96RT6 745 aa29.83■■■□□ 2.37
LAPTM4B-203ENST00000521545 GAS2L1Q99501 681 aaPredicted RBP29.83■■■□□ 2.37
LAPTM4B-203ENST00000521545 SCN5AQ14524 2016 aa29.83■■■□□ 2.37
LAPTM4B-203ENST00000521545 hCG_1642624A0A1W2PR95 340 aa29.82■■■□□ 2.36
LAPTM4B-203ENST00000521545 PARNO95453 639 aaKnown RBP29.82■■■□□ 2.36
LAPTM4B-203ENST00000521545 RABGGTBP53611 331 aa29.82■■■□□ 2.36
LAPTM4B-203ENST00000521545 EXOSC10Q01780 885 aaKnown RBP29.82■■■□□ 2.36
LAPTM4B-203ENST00000521545 PTK7Q13308 1070 aa29.82■■■□□ 2.36
LAPTM4B-203ENST00000521545 APOA5Q6Q788 366 aa29.82■■■□□ 2.36
LAPTM4B-203ENST00000521545 NLRX1Q86UT6 975 aa29.82■■■□□ 2.36
LAPTM4B-203ENST00000521545 RBM28Q9NW13 759 aaKnown RBP29.82■■■□□ 2.36
LAPTM4B-203ENST00000521545 YBX2Q9Y2T7 364 aaKnown RBP29.82■■■□□ 2.36
LAPTM4B-203ENST00000521545 PCDHA11Q9Y5I1 949 aa29.82■■■□□ 2.36
LAPTM4B-203ENST00000521545 METTL7BQ6UX53 244 aa29.81■■■□□ 2.36
LAPTM4B-203ENST00000521545 LRRC8DQ7L1W4 858 aa29.81■■■□□ 2.36
LAPTM4B-203ENST00000521545 CYFIP1Q7L576 1253 aa29.81■■■□□ 2.36
LAPTM4B-203ENST00000521545 RASEFQ8IZ41 740 aa29.81■■■□□ 2.36
LAPTM4B-203ENST00000521545 C16orf70Q9BSU1 422 aa29.81■■■□□ 2.36
LAPTM4B-203ENST00000521545 A0A0C4DFX4 3053 aa29.81■■■□□ 2.36
LAPTM4B-203ENST00000521545 H3BRB1 525 aa29.8■■■□□ 2.36
LAPTM4B-203ENST00000521545 HMGB1P09429 215 aaKnown RBP29.8■■■□□ 2.36
LAPTM4B-203ENST00000521545 CKBP12277 381 aa29.8■■■□□ 2.36
LAPTM4B-203ENST00000521545 RBL2Q08999 1139 aa29.8■■■□□ 2.36
LAPTM4B-203ENST00000521545 HEATR3Q7Z4Q2 680 aa29.8■■■□□ 2.36
LAPTM4B-203ENST00000521545 DHX38Q92620 1227 aaKnown RBP29.8■■■□□ 2.36
LAPTM4B-203ENST00000521545 TCEANC2Q96MN5 208 aa29.8■■■□□ 2.36
LAPTM4B-203ENST00000521545 USP26Q9BXU7 913 aa29.8■■■□□ 2.36
LAPTM4B-203ENST00000521545 PRDM12Q9H4Q4 367 aa29.8■■■□□ 2.36
LAPTM4B-203ENST00000521545 TUT1Q9H6E5 874 aaKnown RBP29.8■■■□□ 2.36
LAPTM4B-203ENST00000521545 BCAS3Q9H6U6 928 aa29.8■■■□□ 2.36
LAPTM4B-203ENST00000521545 TRIP12Q14669 1992 aaPredicted RBP29.8■■■□□ 2.36
LAPTM4B-203ENST00000521545 ZBTB43O43298 467 aa29.79■■■□□ 2.36
LAPTM4B-203ENST00000521545 SEMA3FQ13275 785 aa29.79■■■□□ 2.36
LAPTM4B-203ENST00000521545 ADCK5Q3MIX3 580 aa29.79■■■□□ 2.36
LAPTM4B-203ENST00000521545 GIMAP8Q8ND71 665 aaPredicted RBP29.79■■■□□ 2.36
LAPTM4B-203ENST00000521545 PHOSPHO2Q8TCD6 241 aa29.79■■■□□ 2.36
LAPTM4B-203ENST00000521545 SLC9A7Q96T83 725 aa29.79■■■□□ 2.36
LAPTM4B-203ENST00000521545 SENP7Q9BQF6 1050 aa29.79■■■□□ 2.36
LAPTM4B-203ENST00000521545 TANC1Q9C0D5 1861 aa29.78■■■□□ 2.36
LAPTM4B-203ENST00000521545 SPDYE3A6NKU9 549 aa29.78■■■□□ 2.36
LAPTM4B-203ENST00000521545 BAIAP3O94812 1187 aa29.78■■■□□ 2.36
LAPTM4B-203ENST00000521545 LGALS2P05162 132 aa29.78■■■□□ 2.36
LAPTM4B-203ENST00000521545 FGD1P98174 961 aa29.78■■■□□ 2.36
LAPTM4B-203ENST00000521545 RTN1Q16799 776 aa29.78■■■□□ 2.36
LAPTM4B-203ENST00000521545 ZNF200P98182 395 aaPredicted RBP29.77■■■□□ 2.36
LAPTM4B-203ENST00000521545 UBE2SQ16763 222 aa29.77■■■□□ 2.36
LAPTM4B-203ENST00000521545 PPP2R2DQ66LE6 453 aa29.77■■■□□ 2.36
LAPTM4B-203ENST00000521545 CDHR1Q96JP9 859 aa29.77■■■□□ 2.36
LAPTM4B-203ENST00000521545 EHMT1Q9H9B1 1298 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms