RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 SAFBQ15424 915 aaKnown RBP eCLIP16.15■□□□□ 0.18
RNF4-202ENST00000502316 EARS2Q5JPH6 523 aaKnown RBP16.15■□□□□ 0.18
RNF4-202ENST00000502316 GJC2Q5T442 439 aaPredicted RBP16.15■□□□□ 0.18
RNF4-202ENST00000502316 TLK2Q86UE8 772 aa16.15■□□□□ 0.18
RNF4-202ENST00000502316 NLRX1Q86UT6 975 aa16.15■□□□□ 0.18
RNF4-202ENST00000502316 EMID1Q96A84 441 aaPredicted RBP16.15■□□□□ 0.18
RNF4-202ENST00000502316 CDHR1Q96JP9 859 aa16.15■□□□□ 0.18
RNF4-202ENST00000502316 FOXP1Q9H334 677 aaPredicted RBP16.15■□□□□ 0.18
RNF4-202ENST00000502316 CTAGE5O15320 804 aa16.14■□□□□ 0.17
RNF4-202ENST00000502316 PGK1P00558 417 aa16.14■□□□□ 0.17
RNF4-202ENST00000502316 TFRCP02786 760 aaKnown RBP16.14■□□□□ 0.17
RNF4-202ENST00000502316 EN2P19622 333 aaPredicted RBP16.14■□□□□ 0.17
RNF4-202ENST00000502316 UBA1P22314 1058 aaKnown RBP16.14■□□□□ 0.17
RNF4-202ENST00000502316 PTGS1P23219 599 aa16.14■□□□□ 0.17
RNF4-202ENST00000502316 U2AF2P26368 475 aaKnown RBP eCLIP16.14■□□□□ 0.176e-8■□□□□ 9.9
RNF4-202ENST00000502316 SOX10P56693 466 aa16.14■□□□□ 0.17
RNF4-202ENST00000502316 SP2Q02086 613 aa16.14■□□□□ 0.17
RNF4-202ENST00000502316 LRRC41Q15345 812 aa16.14■□□□□ 0.17
RNF4-202ENST00000502316 LY6KQ17RY6 165 aa16.14■□□□□ 0.17
RNF4-202ENST00000502316 INF2Q27J81 1249 aa16.14■□□□□ 0.17
RNF4-202ENST00000502316 MOXD1Q6UVY6 613 aa16.14■□□□□ 0.17
RNF4-202ENST00000502316 PIK3AP1Q6ZUJ8 805 aa16.14■□□□□ 0.17
RNF4-202ENST00000502316 UBE2Q1Q7Z7E8 422 aa16.14■□□□□ 0.17
RNF4-202ENST00000502316 ARRDC4Q8NCT1 418 aa16.14■□□□□ 0.17
RNF4-202ENST00000502316 KLHDC9Q8NEP7 349 aa16.14■□□□□ 0.17
RNF4-202ENST00000502316 CYP2W1Q8TAV3 490 aa16.14■□□□□ 0.17
RNF4-202ENST00000502316 SENP7Q9BQF6 1050 aa16.14■□□□□ 0.17
RNF4-202ENST00000502316 KCNH7Q9NS40 1196 aa16.14■□□□□ 0.17
RNF4-202ENST00000502316 CYP3A7-CYP3A51PA0A087WV96 503 aa16.13■□□□□ 0.17
RNF4-202ENST00000502316 DNM1LO00429 736 aa16.13■□□□□ 0.17
RNF4-202ENST00000502316 GH1P01241 217 aa16.13■□□□□ 0.17
RNF4-202ENST00000502316 PDCP20941 246 aa16.13■□□□□ 0.17
RNF4-202ENST00000502316 CYP3A7P24462 503 aa16.13■□□□□ 0.17
RNF4-202ENST00000502316 SETQ01105 290 aaPredicted RBP16.13■□□□□ 0.17
RNF4-202ENST00000502316 ARHGAP1Q07960 439 aa16.13■□□□□ 0.17
RNF4-202ENST00000502316 LARP1BQ659C4 914 aaKnown RBP16.13■□□□□ 0.17
RNF4-202ENST00000502316 CCSAPQ6IQ19 270 aaPredicted RBP16.13■□□□□ 0.17
RNF4-202ENST00000502316 NEK8Q86SG6 692 aa16.13■□□□□ 0.17
RNF4-202ENST00000502316 RNF180Q86T96 592 aa16.13■□□□□ 0.17
RNF4-202ENST00000502316 COPS5Q92905 334 aa16.13■□□□□ 0.17
RNF4-202ENST00000502316 LENG9Q96B70 501 aa16.13■□□□□ 0.17
RNF4-202ENST00000502316 MBOAT7Q96N66 472 aa16.13■□□□□ 0.17
RNF4-202ENST00000502316 SPC25Q9HBM1 224 aa16.13■□□□□ 0.17
RNF4-202ENST00000502316 MYADML2A6NDP7 307 aa16.12■□□□□ 0.17
RNF4-202ENST00000502316 FAM205CA6NFA0 338 aa16.12■□□□□ 0.17
RNF4-202ENST00000502316 KIF28PB7ZC32 967 aa16.12■□□□□ 0.17
RNF4-202ENST00000502316 DYNC1LI2O43237 492 aaPredicted RBP16.12■□□□□ 0.17
RNF4-202ENST00000502316 C6orf222P0C671 652 aaPredicted RBP16.12■□□□□ 0.17
RNF4-202ENST00000502316 KCNA2P16389 499 aa16.12■□□□□ 0.17
RNF4-202ENST00000502316 ZNF76P36508 570 aa16.12■□□□□ 0.17
RNF4-202ENST00000502316 NEDD9Q14511 834 aa16.12■□□□□ 0.17
RNF4-202ENST00000502316 CELF3Q5SZQ8 465 aaKnown RBP16.12■□□□□ 0.17
RNF4-202ENST00000502316 MYSM1Q5VVJ2 828 aa16.12■□□□□ 0.17
RNF4-202ENST00000502316 PPP4R3AQ6IN85 833 aa16.12■□□□□ 0.17
RNF4-202ENST00000502316 NOSTRINQ8IVI9 506 aa16.12■□□□□ 0.17
RNF4-202ENST00000502316 AP5M1Q9H0R1 490 aa16.12■□□□□ 0.17
RNF4-202ENST00000502316 A6NJR5 290 aa16.11■□□□□ 0.17
RNF4-202ENST00000502316 H3BQV1 296 aa16.11■□□□□ 0.17
RNF4-202ENST00000502316 ATP9AO75110 1047 aa16.11■□□□□ 0.17
RNF4-202ENST00000502316 GGPS1O95749 300 aa16.11■□□□□ 0.17
RNF4-202ENST00000502316 ARP10275 920 aa16.11■□□□□ 0.17
RNF4-202ENST00000502316 COL6A1P12109 1028 aa16.11■□□□□ 0.17
RNF4-202ENST00000502316 GCFC2P16383 781 aaKnown RBP16.11■□□□□ 0.17
RNF4-202ENST00000502316 CPT1AP50416 773 aa16.11■□□□□ 0.17
RNF4-202ENST00000502316 IRX5P78411 483 aaPredicted RBP16.11■□□□□ 0.17
RNF4-202ENST00000502316 LAMC2Q13753 1193 aa16.11■□□□□ 0.17
RNF4-202ENST00000502316 FSCN1Q16658 493 aaKnown RBP16.11■□□□□ 0.17
RNF4-202ENST00000502316 Q4G0T1 1027 aa16.11■□□□□ 0.17
RNF4-202ENST00000502316 IFFO2Q5TF58 517 aa16.11■□□□□ 0.17
RNF4-202ENST00000502316 PLA2G4DQ86XP0 818 aa16.11■□□□□ 0.17
RNF4-202ENST00000502316 DHX37Q8IY37 1157 aaKnown RBP16.11■□□□□ 0.17
RNF4-202ENST00000502316 GIMAP8Q8ND71 665 aaPredicted RBP16.11■□□□□ 0.17
RNF4-202ENST00000502316 OR6J1Q8NGC5 347 aa16.11■□□□□ 0.17
RNF4-202ENST00000502316 TSEN34Q9BSV6 310 aaKnown RBP16.11■□□□□ 0.17
RNF4-202ENST00000502316 AGO4Q9HCK5 861 aaKnown RBP16.11■□□□□ 0.17
RNF4-202ENST00000502316 KBTBD13C9JR72 458 aa16.1■□□□□ 0.17
RNF4-202ENST00000502316 FARP2O94887 1054 aaPredicted RBP16.1■□□□□ 0.17
RNF4-202ENST00000502316 TDP2O95551 362 aa16.1■□□□□ 0.17
RNF4-202ENST00000502316 HOXD8P13378 290 aaPredicted RBP16.1■□□□□ 0.17
RNF4-202ENST00000502316 SYT1P21579 422 aa16.1■□□□□ 0.17
RNF4-202ENST00000502316 LETM2Q2VYF4 491 aa16.1■□□□□ 0.17
RNF4-202ENST00000502316 PRR16Q569H4 304 aa16.1■□□□□ 0.17
RNF4-202ENST00000502316 GNASQ5JWF2 1037 aa16.1■□□□□ 0.17
RNF4-202ENST00000502316 METTL7BQ6UX53 244 aa16.1■□□□□ 0.17
RNF4-202ENST00000502316 PCSK9Q8NBP7 692 aaKnown RBP16.1■□□□□ 0.17
RNF4-202ENST00000502316 PPTC7Q8NI37 304 aa16.1■□□□□ 0.17
RNF4-202ENST00000502316 NAP1L4Q99733 375 aaKnown RBP16.1■□□□□ 0.17
RNF4-202ENST00000502316 BCAS3Q9H6U6 928 aa16.1■□□□□ 0.17
RNF4-202ENST00000502316 FOXD4L1Q9NU39 408 aa16.1■□□□□ 0.17
RNF4-202ENST00000502316 PHF24Q9UPV7 400 aa16.1■□□□□ 0.17
RNF4-202ENST00000502316 NFASCO94856 1347 aa16.1■□□□□ 0.17
RNF4-202ENST00000502316 MOXD2PA6NHM9 499 aa16.09■□□□□ 0.17
RNF4-202ENST00000502316 HSP90AA1P07900 732 aaKnown RBP16.09■□□□□ 0.17
RNF4-202ENST00000502316 BEX3Q00994 111 aa16.09■□□□□ 0.17
RNF4-202ENST00000502316 ITGB3BPQ13352 177 aaPredicted RBP16.09■□□□□ 0.17
RNF4-202ENST00000502316 GNL2Q13823 731 aaKnown RBP16.09■□□□□ 0.17
RNF4-202ENST00000502316 BECN1Q14457 450 aa16.09■□□□□ 0.17
RNF4-202ENST00000502316 KCNA10Q16322 511 aa16.09■□□□□ 0.17
RNF4-202ENST00000502316 HSDL1Q3SXM5 330 aa16.09■□□□□ 0.17
RNF4-202ENST00000502316 CYFIP1Q7L576 1253 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 1419.1 ms