RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 STK32CQ86UX6 486 aa5.75□□□□□ -1.49
CBX3-208ENST00000497498 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.75□□□□□ -1.49
CBX3-208ENST00000497498 ZNF408Q9H9D4 720 aa5.75□□□□□ -1.49
CBX3-208ENST00000497498 PCDHA2Q9Y5H9 948 aa5.75□□□□□ -1.49
CBX3-208ENST00000497498 GJB6O95452 261 aa5.74□□□□□ -1.49
CBX3-208ENST00000497498 TCF3P15923 654 aa5.74□□□□□ -1.49
CBX3-208ENST00000497498 MAGEA10P43363 369 aaPredicted RBP5.74□□□□□ -1.49
CBX3-208ENST00000497498 ADAM9Q13443 819 aa5.74□□□□□ -1.49
CBX3-208ENST00000497498 ZXDCQ2QGD7 858 aaPredicted RBP5.74□□□□□ -1.49
CBX3-208ENST00000497498 SLC10A6Q3KNW5 377 aa5.74□□□□□ -1.49
CBX3-208ENST00000497498 CDIP1Q9H305 208 aa5.74□□□□□ -1.49
CBX3-208ENST00000497498 TCRBV5S2A0A599 114 aa5.73□□□□□ -1.49
CBX3-208ENST00000497498 MROH6A6NGR9 719 aa5.73□□□□□ -1.49
CBX3-208ENST00000497498 DDX3XO00571 662 aaKnown RBP eCLIP5.73□□□□□ -1.492e-29■□□□□ 9.3
CBX3-208ENST00000497498 PLATP00750 562 aa5.73□□□□□ -1.49
CBX3-208ENST00000497498 GRIA2P42262 883 aa5.73□□□□□ -1.49
CBX3-208ENST00000497498 MAP4K2Q12851 820 aa5.73□□□□□ -1.49
CBX3-208ENST00000497498 ZNF827Q17R98 1081 aa5.73□□□□□ -1.49
CBX3-208ENST00000497498 TBC1D10BQ4KMP7 808 aaPredicted RBP5.73□□□□□ -1.49
CBX3-208ENST00000497498 STEAP3Q658P3 488 aa5.73□□□□□ -1.49
CBX3-208ENST00000497498 MCTP2Q6DN12 878 aa5.73□□□□□ -1.49
CBX3-208ENST00000497498 MCF2L2Q86YR7 1114 aa5.73□□□□□ -1.49
CBX3-208ENST00000497498 LGI4Q8N135 537 aa5.73□□□□□ -1.49
CBX3-208ENST00000497498 TXNDC5Q8NBS9 432 aaKnown RBP5.73□□□□□ -1.49
CBX3-208ENST00000497498 ARRDC4Q8NCT1 418 aa5.73□□□□□ -1.49
CBX3-208ENST00000497498 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.73□□□□□ -1.49
CBX3-208ENST00000497498 TOE1Q96GM8 510 aaKnown RBP5.73□□□□□ -1.49
CBX3-208ENST00000497498 TINF2Q9BSI4 451 aa5.73□□□□□ -1.49
CBX3-208ENST00000497498 DTLQ9NZJ0 730 aa5.73□□□□□ -1.49
CBX3-208ENST00000497498 MYRFQ9Y2G1 1151 aa5.73□□□□□ -1.49
CBX3-208ENST00000497498 A0A1W2PQU0 124 aa5.72□□□□□ -1.49
CBX3-208ENST00000497498 C9orf118A6NHY6 69 aa5.72□□□□□ -1.49
CBX3-208ENST00000497498 DGKIO75912 1065 aa5.72□□□□□ -1.49
CBX3-208ENST00000497498 ZNF28P17035 718 aa5.72□□□□□ -1.49
CBX3-208ENST00000497498 PPP2R2AP63151 447 aa5.72□□□□□ -1.49
CBX3-208ENST00000497498 ARID5AQ03989 594 aa5.72□□□□□ -1.49
CBX3-208ENST00000497498 FAM124AQ86V42 546 aa5.72□□□□□ -1.49
CBX3-208ENST00000497498 YIPF4Q9BSR8 244 aa5.72□□□□□ -1.49
CBX3-208ENST00000497498 EPB41L1Q9H4G0 881 aa5.72□□□□□ -1.49
CBX3-208ENST00000497498 CLDND1Q9NY35 253 aa5.72□□□□□ -1.49
CBX3-208ENST00000497498 HSPBP1Q9NZL4 362 aa5.72□□□□□ -1.49
CBX3-208ENST00000497498 INVSQ9Y283 1065 aa5.72□□□□□ -1.49
CBX3-208ENST00000497498 PCDHB4Q9Y5E5 795 aa5.72□□□□□ -1.49
CBX3-208ENST00000497498 AGRPO00253 132 aa5.71□□□□□ -1.5
CBX3-208ENST00000497498 LRG1P02750 347 aa5.71□□□□□ -1.5
CBX3-208ENST00000497498 ADAM17P78536 824 aa5.71□□□□□ -1.5
CBX3-208ENST00000497498 BORAQ6PGQ7 559 aa5.71□□□□□ -1.5
CBX3-208ENST00000497498 TEPPQ6URK8 271 aa5.71□□□□□ -1.5
CBX3-208ENST00000497498 TTC9BQ8N6N2 239 aa5.71□□□□□ -1.5
CBX3-208ENST00000497498 KCTD13Q8WZ19 329 aa5.71□□□□□ -1.5
CBX3-208ENST00000497498 CHAMP1Q96JM3 812 aa5.71□□□□□ -1.5
CBX3-208ENST00000497498 LCORQ96JN0 433 aaPredicted RBP5.71□□□□□ -1.5
CBX3-208ENST00000497498 SAMD11Q96NU1 681 aa5.71□□□□□ -1.5
CBX3-208ENST00000497498 SSBP3Q9BWW4 388 aaPredicted RBP5.71□□□□□ -1.5
CBX3-208ENST00000497498 KRTAP3-1Q9BYR8 98 aa5.71□□□□□ -1.5
CBX3-208ENST00000497498 SMOC1Q9H4F8 434 aa5.71□□□□□ -1.5
CBX3-208ENST00000497498 GPR27Q9NS67 375 aa5.71□□□□□ -1.5
CBX3-208ENST00000497498 SMPD4Q9NXE4 827 aa5.71□□□□□ -1.5
CBX3-208ENST00000497498 DLX3O60479 287 aa5.7□□□□□ -1.5
CBX3-208ENST00000497498 INSRRP14616 1297 aa5.7□□□□□ -1.5
CBX3-208ENST00000497498 CYP4F22Q6NT55 531 aa5.7□□□□□ -1.5
CBX3-208ENST00000497498 CELF2-AS1Q8N7Q2 184 aa5.7□□□□□ -1.5
CBX3-208ENST00000497498 PHOSPHO1Q8TCT1 267 aa5.7□□□□□ -1.5
CBX3-208ENST00000497498 GMLQ99445 158 aa5.7□□□□□ -1.5
CBX3-208ENST00000497498 GPR20Q99678 358 aa5.7□□□□□ -1.5
CBX3-208ENST00000497498 C1QTNF3Q9BXJ4 246 aa5.7□□□□□ -1.5
CBX3-208ENST00000497498 MYOTQ9UBF9 498 aa5.7□□□□□ -1.5
CBX3-208ENST00000497498 WASF3Q9UPY6 502 aa5.7□□□□□ -1.5
CBX3-208ENST00000497498 B4GALT3O60512 393 aa5.69□□□□□ -1.5
CBX3-208ENST00000497498 IL13P35225 146 aa5.69□□□□□ -1.5
CBX3-208ENST00000497498 MLLT6P55198 1093 aaPredicted RBP5.69□□□□□ -1.5
CBX3-208ENST00000497498 DDR2Q16832 855 aa5.69□□□□□ -1.5
CBX3-208ENST00000497498 PRAMEF18Q5VWM3 479 aa5.69□□□□□ -1.5
CBX3-208ENST00000497498 RSPO2Q6UXX9 243 aaPredicted RBP5.69□□□□□ -1.5
CBX3-208ENST00000497498 SLC43A3Q8NBI5 491 aa5.69□□□□□ -1.5
CBX3-208ENST00000497498 HNRNPLLQ8WVV9 542 aaKnown RBP5.69□□□□□ -1.5
CBX3-208ENST00000497498 MBD6Q96DN6 1003 aa5.69□□□□□ -1.5
CBX3-208ENST00000497498 SGSM3Q96HU1 749 aa5.69□□□□□ -1.5
CBX3-208ENST00000497498 YTHDC1Q96MU7 727 aaKnown RBP5.69□□□□□ -1.5
CBX3-208ENST00000497498 CLIC6Q96NY7 704 aa5.69□□□□□ -1.5
CBX3-208ENST00000497498 TMEM209Q96SK2 561 aa5.69□□□□□ -1.5
CBX3-208ENST00000497498 IER2Q9BTL4 223 aa5.69□□□□□ -1.5
CBX3-208ENST00000497498 SLC6A20Q9NP91 592 aa5.69□□□□□ -1.5
CBX3-208ENST00000497498 C1QTNF3-AMACRE9PGA6 284 aa5.68□□□□□ -1.5
CBX3-208ENST00000497498 KLF4O43474 513 aa5.68□□□□□ -1.5
CBX3-208ENST00000497498 MAFKO60675 156 aa5.68□□□□□ -1.5
CBX3-208ENST00000497498 MSCO60682 206 aa5.68□□□□□ -1.5
CBX3-208ENST00000497498 CYP7B1O75881 506 aa5.68□□□□□ -1.5
CBX3-208ENST00000497498 PKN3Q6P5Z2 889 aa5.68□□□□□ -1.5
CBX3-208ENST00000497498 TRIM48Q8IWZ4 208 aa5.68□□□□□ -1.5
CBX3-208ENST00000497498 TTLL11Q8NHH1 800 aa5.68□□□□□ -1.5
CBX3-208ENST00000497498 WRNIP1Q96S55 665 aa5.68□□□□□ -1.5
CBX3-208ENST00000497498 ST7Q9NRC1 585 aa5.68□□□□□ -1.5
CBX3-208ENST00000497498 ASH2LQ9UBL3 628 aa5.68□□□□□ -1.5
CBX3-208ENST00000497498 KRIT1O00522 736 aa5.67□□□□□ -1.5
CBX3-208ENST00000497498 HSP90AA2PQ14568 343 aaPredicted RBP5.67□□□□□ -1.5
CBX3-208ENST00000497498 PUM1Q14671 1186 aaKnown RBP eCLIP5.67□□□□□ -1.56e-15■□□□□ 9.6
CBX3-208ENST00000497498 SURF1Q15526 300 aa5.67□□□□□ -1.5
CBX3-208ENST00000497498 CPZQ66K79 652 aa5.67□□□□□ -1.5
CBX3-208ENST00000497498 ANKS3Q6ZW76 656 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms