RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 hCG_1984214I3L0E3 225 aa13.37□□□□□ -0.27
UBA3-211ENST00000493957 JAK2O60674 1132 aa13.37□□□□□ -0.27
UBA3-211ENST00000493957 EIF3JO75822 258 aaKnown RBP13.37□□□□□ -0.27
UBA3-211ENST00000493957 TXNP10599 105 aaKnown RBP13.37□□□□□ -0.27
UBA3-211ENST00000493957 CCND2P30279 289 aa13.37□□□□□ -0.27
UBA3-211ENST00000493957 CLK2P49760 499 aaKnown RBP13.37□□□□□ -0.27
UBA3-211ENST00000493957 MRPL12P52815 198 aaKnown RBP13.37□□□□□ -0.27
UBA3-211ENST00000493957 AKAP17AQ02040 695 aaKnown RBP13.37□□□□□ -0.27
UBA3-211ENST00000493957 SEMA3FQ13275 785 aa13.37□□□□□ -0.27
UBA3-211ENST00000493957 JAKMIP3Q5VZ66 844 aa13.37□□□□□ -0.27
UBA3-211ENST00000493957 RNF180Q86T96 592 aa13.37□□□□□ -0.27
UBA3-211ENST00000493957 ZNF713Q8N859 430 aaPredicted RBP13.37□□□□□ -0.27
UBA3-211ENST00000493957 OR6J1Q8NGC5 347 aa13.37□□□□□ -0.27
UBA3-211ENST00000493957 SCFD2Q8WU76 684 aa13.37□□□□□ -0.27
UBA3-211ENST00000493957 BCAS3Q9H6U6 928 aa13.37□□□□□ -0.27
UBA3-211ENST00000493957 KAT6AQ92794 2004 aa13.36□□□□□ -0.27
UBA3-211ENST00000493957 A0A1W2PQ45 241 aaPredicted RBP13.36□□□□□ -0.27
UBA3-211ENST00000493957 A0A1W2PQY0 241 aa13.36□□□□□ -0.27
UBA3-211ENST00000493957 ESYT2A0FGR8 921 aa13.36□□□□□ -0.27
UBA3-211ENST00000493957 FDPSP14324 419 aaKnown RBP13.36□□□□□ -0.27
UBA3-211ENST00000493957 CAPN2P17655 700 aa13.36□□□□□ -0.27
UBA3-211ENST00000493957 CST5P28325 142 aaPredicted RBP13.36□□□□□ -0.27
UBA3-211ENST00000493957 ACLYP53396 1101 aa13.36□□□□□ -0.27
UBA3-211ENST00000493957 NKX3-2P78367 333 aa13.36□□□□□ -0.27
UBA3-211ENST00000493957 SP2Q02086 613 aa13.36□□□□□ -0.27
UBA3-211ENST00000493957 FSCN1Q16658 493 aaKnown RBP13.36□□□□□ -0.27
UBA3-211ENST00000493957 GNASQ5JWF2 1037 aa13.36□□□□□ -0.27
UBA3-211ENST00000493957 PCNX4Q63HM2 1172 aa13.36□□□□□ -0.27
UBA3-211ENST00000493957 TRIM22Q8IYM9 498 aa13.36□□□□□ -0.27
UBA3-211ENST00000493957 NSUN7Q8NE18 718 aaKnown RBP13.36□□□□□ -0.27
UBA3-211ENST00000493957 DPF3Q92784 378 aa13.36□□□□□ -0.27
UBA3-211ENST00000493957 ANO3Q9BYT9 981 aa13.36□□□□□ -0.27
UBA3-211ENST00000493957 ZMYND12Q9H0C1 365 aa13.36□□□□□ -0.27
UBA3-211ENST00000493957 AP5M1Q9H0R1 490 aa13.36□□□□□ -0.27
UBA3-211ENST00000493957 RBM27Q9P2N5 1060 aaKnown RBP13.36□□□□□ -0.27
UBA3-211ENST00000493957 DDX41Q9UJV9 622 aaKnown RBP13.36□□□□□ -0.27
UBA3-211ENST00000493957 MYH9P35579 1960 aaKnown RBP13.35□□□□□ -0.27
UBA3-211ENST00000493957 SPDYE3A6NKU9 549 aa13.35□□□□□ -0.27
UBA3-211ENST00000493957 DEXIO95424 95 aa13.35□□□□□ -0.27
UBA3-211ENST00000493957 ASGR1P07306 291 aa13.35□□□□□ -0.27
UBA3-211ENST00000493957 HOXB1P14653 301 aaPredicted RBP13.35□□□□□ -0.27
UBA3-211ENST00000493957 FOSBP53539 338 aa13.35□□□□□ -0.27
UBA3-211ENST00000493957 ARHGAP1Q07960 439 aa13.35□□□□□ -0.27
UBA3-211ENST00000493957 TTLL4Q14679 1199 aa13.35□□□□□ -0.27
UBA3-211ENST00000493957 RABEP1Q15276 862 aa13.35□□□□□ -0.27
UBA3-211ENST00000493957 NPY5RQ15761 445 aa13.35□□□□□ -0.27
UBA3-211ENST00000493957 CPLX2Q6PUV4 134 aaKnown RBP13.35□□□□□ -0.27
UBA3-211ENST00000493957 CXCL17Q6UXB2 119 aa13.35□□□□□ -0.27
UBA3-211ENST00000493957 CCDC83Q8IWF9 413 aa13.35□□□□□ -0.27
UBA3-211ENST00000493957 C7orf61Q8IZ16 206 aa13.35□□□□□ -0.27
UBA3-211ENST00000493957 PPP1R13LQ8WUF5 828 aa13.35□□□□□ -0.27
UBA3-211ENST00000493957 INPP4AQ96PE3 977 aaPredicted RBP13.35□□□□□ -0.27
UBA3-211ENST00000493957 HTATIP2Q9BUP3 242 aa13.35□□□□□ -0.27
UBA3-211ENST00000493957 UPF2Q9HAU5 1272 aaKnown RBP13.35□□□□□ -0.27
UBA3-211ENST00000493957 ORC3Q9UBD5 711 aaPredicted RBP13.35□□□□□ -0.27
UBA3-211ENST00000493957 KCNJ14Q9UNX9 436 aa13.35□□□□□ -0.27
UBA3-211ENST00000493957 LIMCH1Q9UPQ0 1083 aa13.35□□□□□ -0.27
UBA3-211ENST00000493957 TELO2Q9Y4R8 837 aa13.35□□□□□ -0.27
UBA3-211ENST00000493957 MRVI1Q9Y6F6 885 aa13.35□□□□□ -0.27
UBA3-211ENST00000493957 STK36Q9NRP7 1315 aa13.35□□□□□ -0.27
UBA3-211ENST00000493957 ITGB5P18084 799 aa13.34□□□□□ -0.27
UBA3-211ENST00000493957 UBA1P22314 1058 aaKnown RBP13.34□□□□□ -0.27
UBA3-211ENST00000493957 RTP1P59025 263 aa13.34□□□□□ -0.27
UBA3-211ENST00000493957 PSMC6P62333 389 aa13.34□□□□□ -0.27
UBA3-211ENST00000493957 TRIM60Q495X7 471 aa13.34□□□□□ -0.27
UBA3-211ENST00000493957 SLC39A5Q6ZMH5 540 aa13.34□□□□□ -0.27
UBA3-211ENST00000493957 CYP2W1Q8TAV3 490 aa13.34□□□□□ -0.27
UBA3-211ENST00000493957 AFG1LQ8WV93 481 aa13.34□□□□□ -0.27
UBA3-211ENST00000493957 TSEN34Q9BSV6 310 aaKnown RBP13.34□□□□□ -0.27
UBA3-211ENST00000493957 SPC25Q9HBM1 224 aa13.34□□□□□ -0.27
UBA3-211ENST00000493957 C6orf50Q9HD87 102 aa13.34□□□□□ -0.27
UBA3-211ENST00000493957 Q9Y3F1 56 aa13.34□□□□□ -0.27
UBA3-211ENST00000493957 H0YGN5 161 aa13.33□□□□□ -0.28
UBA3-211ENST00000493957 EDIL3O43854 480 aa13.33□□□□□ -0.28
UBA3-211ENST00000493957 CDKL5O76039 1030 aa13.33□□□□□ -0.28
UBA3-211ENST00000493957 GGPS1O95749 300 aa13.33□□□□□ -0.28
UBA3-211ENST00000493957 GH1P01241 217 aa13.33□□□□□ -0.28
UBA3-211ENST00000493957 NLRP5P59047 1200 aa13.33□□□□□ -0.28
UBA3-211ENST00000493957 REXO1Q8N1G1 1221 aaKnown RBP13.33□□□□□ -0.28
UBA3-211ENST00000493957 CCDC148Q8NFR7 591 aa13.33□□□□□ -0.28
UBA3-211ENST00000493957 SH3GLB2Q9NR46 395 aa13.33□□□□□ -0.28
UBA3-211ENST00000493957 PKD2L1Q9P0L9 805 aa13.33□□□□□ -0.28
UBA3-211ENST00000493957 UBIAD1Q9Y5Z9 338 aa13.33□□□□□ -0.28
UBA3-211ENST00000493957 GRIN2DO15399 1336 aa13.33□□□□□ -0.28
UBA3-211ENST00000493957 SCN5AQ14524 2016 aa13.32□□□□□ -0.28
UBA3-211ENST00000493957 MOXD2PA6NHM9 499 aa13.32□□□□□ -0.28
UBA3-211ENST00000493957 SPATA31C2B4DYI2 1134 aa13.32□□□□□ -0.28
UBA3-211ENST00000493957 M0R2N6 131 aa13.32□□□□□ -0.28
UBA3-211ENST00000493957 NKRFO15226 690 aaKnown RBP eCLIP13.32□□□□□ -0.28
UBA3-211ENST00000493957 EVI5O60447 810 aa13.32□□□□□ -0.28
UBA3-211ENST00000493957 ATP9AO75110 1047 aa13.32□□□□□ -0.28
UBA3-211ENST00000493957 MYL3P08590 195 aa13.32□□□□□ -0.28
UBA3-211ENST00000493957 SYN1P17600 705 aa13.32□□□□□ -0.28
UBA3-211ENST00000493957 ICAM3P32942 547 aa13.32□□□□□ -0.28
UBA3-211ENST00000493957 SREBF1P36956 1147 aa13.32□□□□□ -0.28
UBA3-211ENST00000493957 ARHGAP4P98171 946 aa13.32□□□□□ -0.28
UBA3-211ENST00000493957 AP3B2Q13367 1082 aa13.32□□□□□ -0.28
UBA3-211ENST00000493957 SNX17Q15036 470 aa13.32□□□□□ -0.28
UBA3-211ENST00000493957 PCSK9Q8NBP7 692 aaKnown RBP13.32□□□□□ -0.28
UBA3-211ENST00000493957 CCDC12Q8WUD4 166 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms