RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 ZNF577Q9BSK1 485 aa21.92■■□□□ 1.1
USP39-218ENST00000493829 KCNMB3Q9NPA1 279 aa21.92■■□□□ 1.1
USP39-218ENST00000493829 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.92■■□□□ 1.1
USP39-218ENST00000493829 PCDHA7Q9UN72 937 aa21.92■■□□□ 1.1
USP39-218ENST00000493829 KIAA1217Q5T5P2 1943 aa21.92■■□□□ 1.1
USP39-218ENST00000493829 GADD45BO75293 160 aaPredicted RBP21.91■■□□□ 1.1
USP39-218ENST00000493829 HOXC6P09630 235 aa21.91■■□□□ 1.1
USP39-218ENST00000493829 IL17AQ16552 155 aa21.91■■□□□ 1.1
USP39-218ENST00000493829 GNPTABQ3T906 1256 aa21.91■■□□□ 1.1
USP39-218ENST00000493829 JMYQ8N9B5 988 aa21.91■■□□□ 1.1
USP39-218ENST00000493829 KRI1Q8N9T8 703 aaKnown RBP21.91■■□□□ 1.1
USP39-218ENST00000493829 MTMR9Q96QG7 549 aa21.91■■□□□ 1.1
USP39-218ENST00000493829 TINF2Q9BSI4 451 aa21.91■■□□□ 1.1
USP39-218ENST00000493829 DDX39AO00148 427 aaKnown RBP21.91■■□□□ 1.1
USP39-218ENST00000493829 PPP6R2O75170 966 aa21.91■■□□□ 1.1
USP39-218ENST00000493829 MCM4P33991 863 aa21.91■■□□□ 1.1
USP39-218ENST00000493829 SEMA3FQ13275 785 aa21.91■■□□□ 1.1
USP39-218ENST00000493829 SPECC1Q5M775 1068 aa21.91■■□□□ 1.1
USP39-218ENST00000493829 NIPA1Q7RTP0 329 aa21.91■■□□□ 1.1
USP39-218ENST00000493829 MORC4Q8TE76 937 aa21.91■■□□□ 1.1
USP39-218ENST00000493829 AGO4Q9HCK5 861 aaKnown RBP21.91■■□□□ 1.1
USP39-218ENST00000493829 ELP1O95163 1332 aa21.9■■□□□ 1.1
USP39-218ENST00000493829 LAD1O00515 517 aa21.9■■□□□ 1.1
USP39-218ENST00000493829 STAM2O75886 525 aa21.9■■□□□ 1.1
USP39-218ENST00000493829 CYP2C19P33261 490 aa21.9■■□□□ 1.1
USP39-218ENST00000493829 TECP42680 631 aa21.9■■□□□ 1.1
USP39-218ENST00000493829 DTHD1Q6ZMT9 781 aa21.9■■□□□ 1.1
USP39-218ENST00000493829 TMEM87AQ8NBN3 555 aa21.9■■□□□ 1.1
USP39-218ENST00000493829 GPRASP2Q96D09 838 aa21.9■■□□□ 1.1
USP39-218ENST00000493829 SRRDQ9UH36 339 aa21.9■■□□□ 1.1
USP39-218ENST00000493829 ZHX1Q9UKY1 873 aaPredicted RBP21.9■■□□□ 1.1
USP39-218ENST00000493829 IPO5O00410 1097 aaKnown RBP21.89■■□□□ 1.1
USP39-218ENST00000493829 SNAI1O95863 264 aaPredicted RBP21.89■■□□□ 1.1
USP39-218ENST00000493829 LRCH2Q5VUJ6 765 aa21.89■■□□□ 1.1
USP39-218ENST00000493829 MAMDC4Q6UXC1 1216 aa21.89■■□□□ 1.1
USP39-218ENST00000493829 CSRNP2Q9H175 543 aa21.89■■□□□ 1.1
USP39-218ENST00000493829 TTC12Q9H892 705 aaPredicted RBP21.89■■□□□ 1.1
USP39-218ENST00000493829 PDGFCQ9NRA1 345 aa21.89■■□□□ 1.1
USP39-218ENST00000493829 DOCK5Q9H7D0 1870 aa21.89■■□□□ 1.09
USP39-218ENST00000493829 CASP8AP2Q9UKL3 1982 aa21.89■■□□□ 1.09
USP39-218ENST00000493829 SYNGAP1Q96PV0 1343 aa21.89■■□□□ 1.09
USP39-218ENST00000493829 LOC102724159A0A0B4J2E5 919 aa21.88■■□□□ 1.09
USP39-218ENST00000493829 GOLGA6L4A6NEF3 574 aa21.88■■□□□ 1.09
USP39-218ENST00000493829 POTEMA6NI47 508 aa21.88■■□□□ 1.09
USP39-218ENST00000493829 CHMP2AO43633 222 aa21.88■■□□□ 1.09
USP39-218ENST00000493829 ATP9AO75110 1047 aa21.88■■□□□ 1.09
USP39-218ENST00000493829 PRPHP41219 470 aa21.88■■□□□ 1.09
USP39-218ENST00000493829 ITGB3BPQ13352 177 aaPredicted RBP21.88■■□□□ 1.09
USP39-218ENST00000493829 PWP2Q15269 919 aaKnown RBP21.88■■□□□ 1.09
USP39-218ENST00000493829 ARL6IP4Q66PJ3 421 aaKnown RBP21.88■■□□□ 1.09
USP39-218ENST00000493829 SLFN12Q8IYM2 578 aa21.88■■□□□ 1.09
USP39-218ENST00000493829 TRIB2Q92519 343 aa21.88■■□□□ 1.09
USP39-218ENST00000493829 SLC5A5Q92911 643 aa21.88■■□□□ 1.09
USP39-218ENST00000493829 SRPRBQ9Y5M8 271 aaKnown RBP21.88■■□□□ 1.09
USP39-218ENST00000493829 PP2D1A8MPX8 630 aa21.88■■□□□ 1.09
USP39-218ENST00000493829 GAS7O60861 476 aa21.88■■□□□ 1.09
USP39-218ENST00000493829 ELNP15502 786 aa21.88■■□□□ 1.09
USP39-218ENST00000493829 HOXD10P28358 340 aa21.88■■□□□ 1.09
USP39-218ENST00000493829 TMEM266Q2M3C6 531 aa21.88■■□□□ 1.09
USP39-218ENST00000493829 PRAMEF19Q5SWL8 479 aa21.88■■□□□ 1.09
USP39-218ENST00000493829 FERMT2Q96AC1 680 aa21.88■■□□□ 1.09
USP39-218ENST00000493829 TRIM17Q9Y577 477 aa21.88■■□□□ 1.09
USP39-218ENST00000493829 SPATA31C2B4DYI2 1134 aa21.87■■□□□ 1.09
USP39-218ENST00000493829 TBX3O15119 743 aa21.87■■□□□ 1.09
USP39-218ENST00000493829 CUTAO60888 179 aa21.87■■□□□ 1.09
USP39-218ENST00000493829 ARIH2O95376 493 aa21.87■■□□□ 1.09
USP39-218ENST00000493829 PTGS1P23219 599 aa21.87■■□□□ 1.09
USP39-218ENST00000493829 SP4Q02446 784 aa21.87■■□□□ 1.09
USP39-218ENST00000493829 AXDND1Q5T1B0 1012 aaPredicted RBP21.87■■□□□ 1.09
USP39-218ENST00000493829 OLFML2BQ68BL8 750 aa21.87■■□□□ 1.09
USP39-218ENST00000493829 FAM20AQ96MK3 541 aa21.87■■□□□ 1.09
USP39-218ENST00000493829 BCAS3Q9H6U6 928 aa21.87■■□□□ 1.09
USP39-218ENST00000493829 LMBRD1Q9NUN5 540 aa21.87■■□□□ 1.09
USP39-218ENST00000493829 PCDHA12Q9UN75 941 aa21.87■■□□□ 1.09
USP39-218ENST00000493829 FOXN1O15353 648 aa21.86■■□□□ 1.09
USP39-218ENST00000493829 UBA1P22314 1058 aaKnown RBP21.86■■□□□ 1.09
USP39-218ENST00000493829 CDC25AP30304 524 aa21.86■■□□□ 1.09
USP39-218ENST00000493829 SP2Q02086 613 aa21.86■■□□□ 1.09
USP39-218ENST00000493829 NFKBIBQ15653 356 aa21.86■■□□□ 1.09
USP39-218ENST00000493829 LY6KQ17RY6 165 aa21.86■■□□□ 1.09
USP39-218ENST00000493829 TMEM63BQ5T3F8 832 aa21.86■■□□□ 1.09
USP39-218ENST00000493829 NCAPH2Q6IBW4 605 aa21.86■■□□□ 1.09
USP39-218ENST00000493829 RAET1EQ8TD07 263 aa21.86■■□□□ 1.09
USP39-218ENST00000493829 CDHR1Q96JP9 859 aa21.86■■□□□ 1.09
USP39-218ENST00000493829 TEKT3Q9BXF9 490 aa21.86■■□□□ 1.09
USP39-218ENST00000493829 KATNBL1Q9H079 304 aa21.86■■□□□ 1.09
USP39-218ENST00000493829 VTA1Q9NP79 307 aa21.86■■□□□ 1.09
USP39-218ENST00000493829 VAV3Q9UKW4 847 aa21.86■■□□□ 1.09
USP39-218ENST00000493829 DDX11L8A8MPP1 907 aa21.85■■□□□ 1.09
USP39-218ENST00000493829 XRCC5P13010 732 aaKnown RBP21.85■■□□□ 1.09
USP39-218ENST00000493829 KCNA2P16389 499 aa21.85■■□□□ 1.09
USP39-218ENST00000493829 ADCYAP1R1P41586 468 aa21.85■■□□□ 1.09
USP39-218ENST00000493829 ACVR2BQ13705 512 aa21.85■■□□□ 1.09
USP39-218ENST00000493829 ARHGEF6Q15052 776 aa21.85■■□□□ 1.09
USP39-218ENST00000493829 SHC4Q6S5L8 630 aa21.85■■□□□ 1.09
USP39-218ENST00000493829 MSL3Q8N5Y2 521 aaKnown RBP21.85■■□□□ 1.09
USP39-218ENST00000493829 MORC2Q9Y6X9 1032 aaPredicted RBP21.85■■□□□ 1.09
USP39-218ENST00000493829 PSMD10O75832 226 aa21.85■■□□□ 1.09
USP39-218ENST00000493829 HSPA1AP0DMV8 641 aaKnown RBP21.85■■□□□ 1.09
USP39-218ENST00000493829 HSPA1BP0DMV9 641 aaKnown RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms