RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 SEMA3FQ13275 785 aa16.14■□□□□ 0.17
VTI1A-206ENST00000489142 LAMC2Q13753 1193 aa16.14■□□□□ 0.17
VTI1A-206ENST00000489142 KRT32Q14532 448 aa16.14■□□□□ 0.17
VTI1A-206ENST00000489142 MFSD10Q14728 455 aa16.14■□□□□ 0.17
VTI1A-206ENST00000489142 WWC2Q6AWC2 1192 aa16.14■□□□□ 0.17
VTI1A-206ENST00000489142 GDF6Q6KF10 455 aaPredicted RBP16.14■□□□□ 0.17
VTI1A-206ENST00000489142 PSRC1Q6PGN9 363 aaPredicted RBP16.14■□□□□ 0.17
VTI1A-206ENST00000489142 Q6ZUG5 572 aa16.14■□□□□ 0.17
VTI1A-206ENST00000489142 OTOP2Q7RTS6 562 aa16.14■□□□□ 0.17
VTI1A-206ENST00000489142 DEFB128Q7Z7B8 93 aa16.14■□□□□ 0.17
VTI1A-206ENST00000489142 VWCEQ96DN2 955 aa16.14■□□□□ 0.17
VTI1A-206ENST00000489142 TTYH1Q9H313 450 aaPredicted RBP16.14■□□□□ 0.17
VTI1A-206ENST00000489142 PSTPIP2Q9H939 334 aa16.14■□□□□ 0.17
VTI1A-206ENST00000489142 CXXC1Q9P0U4 656 aaPredicted RBP16.14■□□□□ 0.17
VTI1A-206ENST00000489142 NOD1Q9Y239 953 aa16.14■□□□□ 0.17
VTI1A-206ENST00000489142 TELO2Q9Y4R8 837 aa16.14■□□□□ 0.17
VTI1A-206ENST00000489142 CDH23Q9H251 3354 aa16.13■□□□□ 0.17
VTI1A-206ENST00000489142 PIK3CDO00329 1044 aa16.13■□□□□ 0.17
VTI1A-206ENST00000489142 CDC27P30260 824 aa16.13■□□□□ 0.17
VTI1A-206ENST00000489142 PBX2P40425 430 aa16.13■□□□□ 0.17
VTI1A-206ENST00000489142 PSEN2P49810 448 aa16.13■□□□□ 0.17
VTI1A-206ENST00000489142 PTGISQ16647 500 aa16.13■□□□□ 0.17
VTI1A-206ENST00000489142 KIAA0753Q2KHM9 967 aa16.13■□□□□ 0.17
VTI1A-206ENST00000489142 KCNB2Q92953 911 aa16.13■□□□□ 0.17
VTI1A-206ENST00000489142 CTAGE1Q96RT6 745 aa16.13■□□□□ 0.17
VTI1A-206ENST00000489142 MLXIPQ9HAP2 919 aa16.13■□□□□ 0.17
VTI1A-206ENST00000489142 HDAC6Q9UBN7 1215 aa16.13■□□□□ 0.17
VTI1A-206ENST00000489142 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.12■□□□□ 0.17
VTI1A-206ENST00000489142 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.12■□□□□ 0.17
VTI1A-206ENST00000489142 FGBP02675 491 aa16.12■□□□□ 0.17
VTI1A-206ENST00000489142 SP4Q02446 784 aa16.12■□□□□ 0.17
VTI1A-206ENST00000489142 FUT2Q10981 343 aa16.12■□□□□ 0.17
VTI1A-206ENST00000489142 GNPTABQ3T906 1256 aa16.12■□□□□ 0.17
VTI1A-206ENST00000489142 TYW1BQ6NUM6 668 aa16.12■□□□□ 0.17
VTI1A-206ENST00000489142 KCNV1Q6PIU1 500 aa16.12■□□□□ 0.17
VTI1A-206ENST00000489142 CYFIP1Q7L576 1253 aa16.12■□□□□ 0.17
VTI1A-206ENST00000489142 BRF1Q92994 677 aa16.12■□□□□ 0.17
VTI1A-206ENST00000489142 PGBD1Q96JS3 809 aa16.12■□□□□ 0.17
VTI1A-206ENST00000489142 INPP4AQ96PE3 977 aaPredicted RBP16.12■□□□□ 0.17
VTI1A-206ENST00000489142 SEMA6BQ9H3T3 888 aa16.12■□□□□ 0.17
VTI1A-206ENST00000489142 FAM217BQ9NTX9 383 aaPredicted RBP16.12■□□□□ 0.17
VTI1A-206ENST00000489142 RBM28Q9NW13 759 aaKnown RBP16.12■□□□□ 0.17
VTI1A-206ENST00000489142 V9GY48 417 aaPredicted RBP16.12■□□□□ 0.17
VTI1A-206ENST00000489142 TET1Q8NFU7 2136 aa16.12■□□□□ 0.17
VTI1A-206ENST00000489142 SPATA31C2B4DYI2 1134 aa16.11■□□□□ 0.17
VTI1A-206ENST00000489142 F2P00734 622 aa16.11■□□□□ 0.17
VTI1A-206ENST00000489142 HMGB1P09429 215 aaKnown RBP16.11■□□□□ 0.17
VTI1A-206ENST00000489142 DNAJB2P25686 324 aa16.11■□□□□ 0.17
VTI1A-206ENST00000489142 ZNF200P98182 395 aaPredicted RBP16.11■□□□□ 0.17
VTI1A-206ENST00000489142 PTPN11Q06124 597 aaPredicted RBP16.11■□□□□ 0.17
VTI1A-206ENST00000489142 RASIP1Q5U651 963 aa16.11■□□□□ 0.17
VTI1A-206ENST00000489142 PCNX4Q63HM2 1172 aa16.11■□□□□ 0.17
VTI1A-206ENST00000489142 BLOC1S2Q6QNY1 142 aa16.11■□□□□ 0.17
VTI1A-206ENST00000489142 C7orf31Q8N865 590 aa16.11■□□□□ 0.17
VTI1A-206ENST00000489142 HERVK_113Q902F9 699 aa16.11■□□□□ 0.17
VTI1A-206ENST00000489142 DHX38Q92620 1227 aaKnown RBP16.11■□□□□ 0.17
VTI1A-206ENST00000489142 PKD2L1Q9P0L9 805 aa16.11■□□□□ 0.17
VTI1A-206ENST00000489142 GTF2IRD1Q9UHL9 959 aa16.11■□□□□ 0.17
VTI1A-206ENST00000489142 STXBP5LQ9Y2K9 1186 aa16.11■□□□□ 0.17
VTI1A-206ENST00000489142 EYSQ5T1H1 3165 aa16.1■□□□□ 0.17
VTI1A-206ENST00000489142 ZBBXA8MT70 800 aa16.1■□□□□ 0.17
VTI1A-206ENST00000489142 PPFIA3O75145 1194 aa16.1■□□□□ 0.17
VTI1A-206ENST00000489142 REC8O95072 547 aa16.1■□□□□ 0.17
VTI1A-206ENST00000489142 TGFB3P10600 412 aa16.1■□□□□ 0.17
VTI1A-206ENST00000489142 HOXD8P13378 290 aaPredicted RBP16.1■□□□□ 0.17
VTI1A-206ENST00000489142 ICAM3P32942 547 aa16.1■□□□□ 0.17
VTI1A-206ENST00000489142 ADD1P35611 737 aaKnown RBP16.1■□□□□ 0.17
VTI1A-206ENST00000489142 METAP2P50579 478 aaKnown RBP eCLIP16.1■□□□□ 0.17
VTI1A-206ENST00000489142 NAPAP54920 295 aa16.1■□□□□ 0.17
VTI1A-206ENST00000489142 HIC1Q14526 733 aa16.1■□□□□ 0.17
VTI1A-206ENST00000489142 CDX2Q99626 313 aaPredicted RBP16.1■□□□□ 0.17
VTI1A-206ENST00000489142 KATNAL1Q9BW62 490 aa16.1■□□□□ 0.17
VTI1A-206ENST00000489142 PBX4Q9BYU1 374 aa16.1■□□□□ 0.17
VTI1A-206ENST00000489142 PCDHA6Q9UN73 950 aa16.1■□□□□ 0.17
VTI1A-206ENST00000489142 PCDHA8Q9Y5H6 950 aa16.1■□□□□ 0.17
VTI1A-206ENST00000489142 SPDYE3A6NKU9 549 aa16.09■□□□□ 0.17
VTI1A-206ENST00000489142 STXBP3O00186 592 aa16.09■□□□□ 0.17
VTI1A-206ENST00000489142 HAS3O00219 553 aa16.09■□□□□ 0.17
VTI1A-206ENST00000489142 NOP56O00567 594 aaKnown RBP16.09■□□□□ 0.17
VTI1A-206ENST00000489142 FIBPO43427 364 aa16.09■□□□□ 0.17
VTI1A-206ENST00000489142 PPFIA4O75335 1185 aa16.09■□□□□ 0.17
VTI1A-206ENST00000489142 STAM2O75886 525 aa16.09■□□□□ 0.17
VTI1A-206ENST00000489142 LGALS2P05162 132 aa16.09■□□□□ 0.17
VTI1A-206ENST00000489142 IQCF3P0C7M6 154 aa16.09■□□□□ 0.17
VTI1A-206ENST00000489142 RPS6KB1P23443 525 aa16.09■□□□□ 0.17
VTI1A-206ENST00000489142 BFSP2Q13515 415 aa16.09■□□□□ 0.17
VTI1A-206ENST00000489142 SESTD1Q86VW0 696 aa16.09■□□□□ 0.17
VTI1A-206ENST00000489142 TRIM50Q86XT4 487 aa16.09■□□□□ 0.17
VTI1A-206ENST00000489142 RPUSD2Q8IZ73 545 aaKnown RBP16.09■□□□□ 0.17
VTI1A-206ENST00000489142 RETREG2Q8NC44 543 aa16.09■□□□□ 0.17
VTI1A-206ENST00000489142 MYLIPQ8WY64 445 aa16.09■□□□□ 0.17
VTI1A-206ENST00000489142 WNT8BQ93098 351 aa16.09■□□□□ 0.17
VTI1A-206ENST00000489142 C16orf70Q9BSU1 422 aa16.09■□□□□ 0.17
VTI1A-206ENST00000489142 TMEM260Q9NX78 707 aa16.09■□□□□ 0.17
VTI1A-206ENST00000489142 PPP4R2Q9NY27 417 aa16.09■□□□□ 0.17
VTI1A-206ENST00000489142 PTPRSQ13332 1948 aa16.08■□□□□ 0.16
VTI1A-206ENST00000489142 PITPNM1O00562 1244 aa16.08■□□□□ 0.16
VTI1A-206ENST00000489142 ATP9AO75110 1047 aa16.08■□□□□ 0.16
VTI1A-206ENST00000489142 ITGB5P18084 799 aa16.08■□□□□ 0.16
VTI1A-206ENST00000489142 ADCY7P51828 1080 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms