RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 LRRC26Q2I0M4 334 aa18.18■□□□□ 0.5
UPF3A-208ENST00000484246 WASF1Q92558 559 aa18.18■□□□□ 0.5
UPF3A-208ENST00000484246 CDHR1Q96JP9 859 aa18.18■□□□□ 0.5
UPF3A-208ENST00000484246 GLT1D1Q96MS3 346 aa18.18■□□□□ 0.5
UPF3A-208ENST00000484246 LLPHQ9BRT6 129 aaKnown RBP18.18■□□□□ 0.5
UPF3A-208ENST00000484246 SEZ6LQ9BYH1 1024 aa18.18■□□□□ 0.5
UPF3A-208ENST00000484246 KPNA6O60684 536 aa18.17■□□□□ 0.5
UPF3A-208ENST00000484246 UBA1P22314 1058 aaKnown RBP18.17■□□□□ 0.5
UPF3A-208ENST00000484246 LAMC2Q13753 1193 aa18.17■□□□□ 0.5
UPF3A-208ENST00000484246 LY6KQ17RY6 165 aa18.17■□□□□ 0.5
UPF3A-208ENST00000484246 BRDTQ58F21 947 aaPredicted RBP18.17■□□□□ 0.5
UPF3A-208ENST00000484246 SLC39A5Q6ZMH5 540 aa18.17■□□□□ 0.5
UPF3A-208ENST00000484246 NLRX1Q86UT6 975 aa18.17■□□□□ 0.5
UPF3A-208ENST00000484246 COPS5Q92905 334 aa18.17■□□□□ 0.5
UPF3A-208ENST00000484246 SENP7Q9BQF6 1050 aa18.17■□□□□ 0.5
UPF3A-208ENST00000484246 POLR3EQ9NVU0 708 aa18.17■□□□□ 0.5
UPF3A-208ENST00000484246 ORC3Q9UBD5 711 aaPredicted RBP18.17■□□□□ 0.5
UPF3A-208ENST00000484246 PCDHA4Q9UN74 947 aa18.17■□□□□ 0.5
UPF3A-208ENST00000484246 M0R2N6 131 aa18.16■□□□□ 0.5
UPF3A-208ENST00000484246 MAFGO15525 162 aa18.16■□□□□ 0.5
UPF3A-208ENST00000484246 CYP3A4P08684 503 aa18.16■□□□□ 0.5
UPF3A-208ENST00000484246 FDPSP14324 419 aaKnown RBP18.16■□□□□ 0.5
UPF3A-208ENST00000484246 ITGB5P18084 799 aa18.16■□□□□ 0.5
UPF3A-208ENST00000484246 MCM2P49736 904 aa18.16■□□□□ 0.5
UPF3A-208ENST00000484246 NLRP5P59047 1200 aa18.16■□□□□ 0.5
UPF3A-208ENST00000484246 BEX3Q00994 111 aa18.16■□□□□ 0.5
UPF3A-208ENST00000484246 CELF3Q5SZQ8 465 aaKnown RBP18.16■□□□□ 0.5
UPF3A-208ENST00000484246 PRPF38BQ5VTL8 546 aaKnown RBP18.16■□□□□ 0.5
UPF3A-208ENST00000484246 NIPA1Q7RTP0 329 aa18.16■□□□□ 0.5
UPF3A-208ENST00000484246 SLC43A3Q8NBI5 491 aa18.16■□□□□ 0.5
UPF3A-208ENST00000484246 PPTC7Q8NI37 304 aa18.16■□□□□ 0.5
UPF3A-208ENST00000484246 AIFM3Q96NN9 605 aa18.16■□□□□ 0.5
UPF3A-208ENST00000484246 JADE2Q9NQC1 790 aa18.16■□□□□ 0.5
UPF3A-208ENST00000484246 STARD7Q9NQZ5 370 aa18.16■□□□□ 0.5
UPF3A-208ENST00000484246 TMEM260Q9NX78 707 aa18.16■□□□□ 0.5
UPF3A-208ENST00000484246 NR2E3Q9Y5X4 410 aa18.16■□□□□ 0.5
UPF3A-208ENST00000484246 ADAMTS3O15072 1205 aa18.15■□□□□ 0.5
UPF3A-208ENST00000484246 EVI5O60447 810 aa18.15■□□□□ 0.5
UPF3A-208ENST00000484246 MMP3P08254 477 aa18.15■□□□□ 0.5
UPF3A-208ENST00000484246 XBP1P17861 261 aa18.15■□□□□ 0.5
UPF3A-208ENST00000484246 RTP1P59025 263 aa18.15■□□□□ 0.5
UPF3A-208ENST00000484246 ARHGAP4P98171 946 aa18.15■□□□□ 0.5
UPF3A-208ENST00000484246 PURAQ00577 322 aaKnown RBP18.15■□□□□ 0.5
UPF3A-208ENST00000484246 NEDD9Q14511 834 aa18.15■□□□□ 0.5
UPF3A-208ENST00000484246 MYSM1Q5VVJ2 828 aa18.15■□□□□ 0.5
UPF3A-208ENST00000484246 METTL7BQ6UX53 244 aa18.15■□□□□ 0.5
UPF3A-208ENST00000484246 ANKRD33Q7Z3H0 272 aa18.15■□□□□ 0.5
UPF3A-208ENST00000484246 DPF3Q92784 378 aa18.15■□□□□ 0.5
UPF3A-208ENST00000484246 FERMT2Q96AC1 680 aa18.15■□□□□ 0.5
UPF3A-208ENST00000484246 PHF20Q9BVI0 1012 aa18.15■□□□□ 0.5
UPF3A-208ENST00000484246 A0A0U1RQG5 324 aaPredicted RBP18.14■□□□□ 0.49
UPF3A-208ENST00000484246 GGPS1O95749 300 aa18.14■□□□□ 0.49
UPF3A-208ENST00000484246 CIITAP33076 1130 aa18.14■□□□□ 0.49
UPF3A-208ENST00000484246 SP2Q02086 613 aa18.14■□□□□ 0.49
UPF3A-208ENST00000484246 CEP55Q53EZ4 464 aa18.14■□□□□ 0.49
UPF3A-208ENST00000484246 JAKMIP3Q5VZ66 844 aa18.14■□□□□ 0.49
UPF3A-208ENST00000484246 CXCL17Q6UXB2 119 aa18.14■□□□□ 0.49
UPF3A-208ENST00000484246 GIMAP8Q8ND71 665 aaPredicted RBP18.14■□□□□ 0.49
UPF3A-208ENST00000484246 AFG1LQ8WV93 481 aa18.14■□□□□ 0.49
UPF3A-208ENST00000484246 PGBD1Q96JS3 809 aa18.14■□□□□ 0.49
UPF3A-208ENST00000484246 TOX2Q96NM4 488 aa18.14■□□□□ 0.49
UPF3A-208ENST00000484246 MXRA8Q9BRK3 442 aa18.14■□□□□ 0.49
UPF3A-208ENST00000484246 MTG1Q9BT17 334 aaPredicted RBP18.14■□□□□ 0.49
UPF3A-208ENST00000484246 RTEL1Q9NZ71 1219 aa18.14■□□□□ 0.49
UPF3A-208ENST00000484246 JAK2O60674 1132 aa18.13■□□□□ 0.49
UPF3A-208ENST00000484246 KCNA2P16389 499 aa18.13■□□□□ 0.49
UPF3A-208ENST00000484246 CDK7P50613 346 aa18.13■□□□□ 0.49
UPF3A-208ENST00000484246 ATN1P54259 1190 aaPredicted RBP18.13■□□□□ 0.49
UPF3A-208ENST00000484246 HMGN5P82970 282 aaKnown RBP18.13■□□□□ 0.49
UPF3A-208ENST00000484246 MKRN4PQ13434 485 aaPredicted RBP18.13■□□□□ 0.49
UPF3A-208ENST00000484246 MTMR1Q13613 665 aa18.13■□□□□ 0.49
UPF3A-208ENST00000484246 DHX37Q8IY37 1157 aaKnown RBP18.13■□□□□ 0.49
UPF3A-208ENST00000484246 BLIDQ8IZY5 108 aa18.13■□□□□ 0.49
UPF3A-208ENST00000484246 ZFP91Q96JP5 570 aaPredicted RBP18.13■□□□□ 0.49
UPF3A-208ENST00000484246 ALG1Q9BT22 464 aa18.13■□□□□ 0.49
UPF3A-208ENST00000484246 MROH7Q68CQ1 1323 aa18.13■□□□□ 0.49
UPF3A-208ENST00000484246 IGLV3-22A0A075B6J6 115 aa18.12■□□□□ 0.49
UPF3A-208ENST00000484246 ARVCFO00192 962 aa18.12■□□□□ 0.49
UPF3A-208ENST00000484246 MEIS1O00470 390 aa18.12■□□□□ 0.49
UPF3A-208ENST00000484246 DGKDQ16760 1214 aa18.12■□□□□ 0.49
UPF3A-208ENST00000484246 TRIM60Q495X7 471 aa18.12■□□□□ 0.49
UPF3A-208ENST00000484246 CCDC83Q8IWF9 413 aa18.12■□□□□ 0.49
UPF3A-208ENST00000484246 C7orf61Q8IZ16 206 aa18.12■□□□□ 0.49
UPF3A-208ENST00000484246 RASGRP4Q8TDF6 673 aa18.12■□□□□ 0.49
UPF3A-208ENST00000484246 GRIN2DO15399 1336 aa18.12■□□□□ 0.49
UPF3A-208ENST00000484246 PPFIA4O75335 1185 aa18.11■□□□□ 0.49
UPF3A-208ENST00000484246 CD2BP2O95400 341 aaKnown RBP18.11■□□□□ 0.49
UPF3A-208ENST00000484246 F2P00734 622 aa18.11■□□□□ 0.49
UPF3A-208ENST00000484246 USP11P51784 963 aa18.11■□□□□ 0.49
UPF3A-208ENST00000484246 SETQ01105 290 aaPredicted RBP18.11■□□□□ 0.49
UPF3A-208ENST00000484246 HSDL1Q3SXM5 330 aa18.11■□□□□ 0.49
UPF3A-208ENST00000484246 KRT25Q7Z3Z0 450 aa18.11■□□□□ 0.49
UPF3A-208ENST00000484246 KCNH7Q9NS40 1196 aa18.11■□□□□ 0.49
UPF3A-208ENST00000484246 NFASCO94856 1347 aa18.11■□□□□ 0.49
UPF3A-208ENST00000484246 KIAA1217Q5T5P2 1943 aa18.11■□□□□ 0.49
UPF3A-208ENST00000484246 FAM86B1E9PN63 330 aa18.1■□□□□ 0.49
UPF3A-208ENST00000484246 H0YGN5 161 aa18.1■□□□□ 0.49
UPF3A-208ENST00000484246 EDIL3O43854 480 aa18.1■□□□□ 0.49
UPF3A-208ENST00000484246 FAM86B2P0C5J1 330 aa18.1■□□□□ 0.49
UPF3A-208ENST00000484246 TLE2Q04725 743 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms