RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 SOWAHDA6NJG2 315 aa12.42□□□□□ -0.42
SMPD4-218ENST00000482171 PLA2G4BP0C869 781 aa12.42□□□□□ -0.42
SMPD4-218ENST00000482171 DESP17661 470 aa12.42□□□□□ -0.42
SMPD4-218ENST00000482171 ABCB6Q9NP58 842 aa12.42□□□□□ -0.42
SMPD4-218ENST00000482171 SH3GLB2Q9NR46 395 aa12.42□□□□□ -0.42
SMPD4-218ENST00000482171 E9PMD0 336 aa12.42□□□□□ -0.42
SMPD4-218ENST00000482171 TRIM66O15016 1216 aa12.42□□□□□ -0.42
SMPD4-218ENST00000482171 ABCB4P21439 1286 aa12.42□□□□□ -0.42
SMPD4-218ENST00000482171 STRN3Q13033 797 aa12.42□□□□□ -0.42
SMPD4-218ENST00000482171 PHF20Q9BVI0 1012 aa12.42□□□□□ -0.42
SMPD4-218ENST00000482171 AZI2Q9H6S1 392 aa12.42□□□□□ -0.42
SMPD4-218ENST00000482171 PCDHA6Q9UN73 950 aa12.42□□□□□ -0.42
SMPD4-218ENST00000482171 PCDHA8Q9Y5H6 950 aa12.42□□□□□ -0.42
SMPD4-218ENST00000482171 EPN1Q9Y6I3 576 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-218ENST00000482171 BUB1O43683 1085 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 SPP2Q13103 211 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 KRT31Q15323 416 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 DPY19L2Q6NUT2 758 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 MCF2L2Q86YR7 1114 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 VSTM4Q8IW00 320 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 UBLCP1Q8WVY7 318 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-218ENST00000482171 HPS3Q969F9 1004 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 CABS1Q96KC9 395 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 CUEDC2Q9H467 287 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 STAT3P40763 770 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 PRCPP42785 496 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 MKRN3Q13064 507 aaKnown RBP12.41□□□□□ -0.42
SMPD4-218ENST00000482171 PRAMEF18Q5VWM3 479 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 ZNF579Q8NAF0 562 aaKnown RBP12.41□□□□□ -0.42
SMPD4-218ENST00000482171 ACRBPQ8NEB7 543 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 CAPS2Q9BXY5 557 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 EFCC1Q9HA90 598 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 GPR75-ASB3A0A0A6YYF3 556 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 POTEB3A0JP26 581 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 POTECB2RU33 542 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 CYP2C19P33261 490 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 CASP8Q14790 479 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 IQCB1Q15051 598 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 GNPTABQ3T906 1256 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 POTEBQ6S5H4 581 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 RASGRP2Q7LDG7 609 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 DDX12PQ92771 950 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 FUCA2Q9BTY2 467 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 MLXIPQ9HAP2 919 aa12.41□□□□□ -0.42
SMPD4-218ENST00000482171 A0A1B0GUA9 196 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 hCG_1984214I3L0E3 225 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 CCNE1P24864 410 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 CLNS1AP54105 237 aaKnown RBP12.4□□□□□ -0.42
SMPD4-218ENST00000482171 ARHGAP4P98171 946 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 ATP2C1P98194 919 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-218ENST00000482171 ZRSR2Q15696 482 aaKnown RBP12.4□□□□□ -0.42
SMPD4-218ENST00000482171 STRIP1Q5VSL9 837 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 E4F1Q66K89 784 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-218ENST00000482171 KCTD16Q68DU8 428 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 ZNF713Q8N859 430 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-218ENST00000482171 ANKS4BQ8N8V4 417 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 BPIFA3Q9BQP9 254 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 RAVER2Q9HCJ3 691 aaKnown RBP12.4□□□□□ -0.42
SMPD4-218ENST00000482171 PPANQ9NQ55 473 aaKnown RBP12.4□□□□□ -0.42
SMPD4-218ENST00000482171 STK17AQ9UEE5 414 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 CNTNAP5Q8WYK1 1306 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 PRPF6O94906 941 aaKnown RBP12.4□□□□□ -0.42
SMPD4-218ENST00000482171 DLATP10515 647 aaKnown RBP12.4□□□□□ -0.42
SMPD4-218ENST00000482171 TNNI1P19237 187 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 RCSD1Q6JBY9 416 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 CCDC51Q96ER9 411 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 DHTKD1Q96HY7 919 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-218ENST00000482171 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.4□□□□□ -0.42
SMPD4-218ENST00000482171 E7EVH7 732 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 TEX33O43247 280 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 ARHGAP25P42331 645 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 CCZ1BP86790 482 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 CCZ1P86791 482 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-218ENST00000482171 MCTP2Q6DN12 878 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 ARMCX5Q6P1M9 558 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 CCDC50Q8IVM0 306 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 DHX40Q8IX18 779 aaKnown RBP12.4□□□□□ -0.42
SMPD4-218ENST00000482171 LMBR1Q8WVP7 490 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 DPF2Q92785 391 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 PCIF1Q9H4Z3 704 aa12.4□□□□□ -0.42
SMPD4-218ENST00000482171 FKBP3Q00688 224 aaKnown RBP12.4□□□□□ -0.43
SMPD4-218ENST00000482171 CYP27A1Q02318 531 aa12.4□□□□□ -0.43
SMPD4-218ENST00000482171 VWA3BQ502W6 1294 aa12.4□□□□□ -0.43
SMPD4-218ENST00000482171 WDR44Q5JSH3 913 aa12.4□□□□□ -0.43
SMPD4-218ENST00000482171 ICE2Q659A1 982 aa12.4□□□□□ -0.43
SMPD4-218ENST00000482171 PNMA8AQ86V59 439 aaPredicted RBP12.4□□□□□ -0.43
SMPD4-218ENST00000482171 NOX5Q96PH1 765 aa12.4□□□□□ -0.43
SMPD4-218ENST00000482171 WRNIP1Q96S55 665 aa12.4□□□□□ -0.43
SMPD4-218ENST00000482171 EMILIN3Q9NT22 766 aa12.4□□□□□ -0.43
SMPD4-218ENST00000482171 LRRC4BQ9NT99 713 aa12.4□□□□□ -0.43
SMPD4-218ENST00000482171 KNDC1Q76NI1 1749 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 HGSO14964 777 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-218ENST00000482171 PLCB3Q01970 1234 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 R3HDM1Q15032 1099 aaKnown RBP12.39□□□□□ -0.43
SMPD4-218ENST00000482171 SEPT14Q6ZU15 432 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 C16orf86Q6ZW13 317 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 METTL13Q8N6R0 699 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 U2AF1L4Q8WU68 220 aaKnown RBP12.39□□□□□ -0.43
SMPD4-218ENST00000482171 TMEM60Q9H2L4 133 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 RWDD2AQ9UIY3 292 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms