RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 GTF3C6Q969F1 213 aa14.01□□□□□ -0.17
PTPRF-213ENST00000481019 SNX21Q969T3 373 aa14.01□□□□□ -0.17
PTPRF-213ENST00000481019 ANO3Q9BYT9 981 aa14.01□□□□□ -0.17
PTPRF-213ENST00000481019 STARD7Q9NQZ5 370 aa14.01□□□□□ -0.17
PTPRF-213ENST00000481019 UBIAD1Q9Y5Z9 338 aa14.01□□□□□ -0.17
PTPRF-213ENST00000481019 TRIM43BA6NCK2 446 aa14□□□□□ -0.17
PTPRF-213ENST00000481019 SPDYE3A6NKU9 549 aa14□□□□□ -0.17
PTPRF-213ENST00000481019 PQBP1O60828 265 aaKnown RBP14□□□□□ -0.17
PTPRF-213ENST00000481019 ATP9AO75110 1047 aa14□□□□□ -0.17
PTPRF-213ENST00000481019 CD2BP2O95400 341 aaKnown RBP14□□□□□ -0.17
PTPRF-213ENST00000481019 GGPS1O95749 300 aa14□□□□□ -0.17
PTPRF-213ENST00000481019 MMP3P08254 477 aa14□□□□□ -0.17
PTPRF-213ENST00000481019 ITGB8P26012 769 aa14□□□□□ -0.17
PTPRF-213ENST00000481019 ICAM3P32942 547 aa14□□□□□ -0.17
PTPRF-213ENST00000481019 AKAP17AQ02040 695 aaKnown RBP14□□□□□ -0.17
PTPRF-213ENST00000481019 CELF3Q5SZQ8 465 aaKnown RBP14□□□□□ -0.17
PTPRF-213ENST00000481019 C1orf53Q5VUE5 145 aa14□□□□□ -0.17
PTPRF-213ENST00000481019 MYSM1Q5VVJ2 828 aa14□□□□□ -0.17
PTPRF-213ENST00000481019 HSCBQ8IWL3 235 aa14□□□□□ -0.17
PTPRF-213ENST00000481019 SLC43A3Q8NBI5 491 aa14□□□□□ -0.17
PTPRF-213ENST00000481019 TRIM43Q96BQ3 446 aaPredicted RBP14□□□□□ -0.17
PTPRF-213ENST00000481019 PDLIM7Q9NR12 457 aa14□□□□□ -0.17
PTPRF-213ENST00000481019 KCNJ14Q9UNX9 436 aa14□□□□□ -0.17
PTPRF-213ENST00000481019 ELP1O95163 1332 aa13.99□□□□□ -0.17
PTPRF-213ENST00000481019 ARVCFO00192 962 aa13.99□□□□□ -0.17
PTPRF-213ENST00000481019 DEXIO95424 95 aa13.99□□□□□ -0.17
PTPRF-213ENST00000481019 SREBF1P36956 1147 aa13.99□□□□□ -0.17
PTPRF-213ENST00000481019 HSDL1Q3SXM5 330 aa13.99□□□□□ -0.17
PTPRF-213ENST00000481019 DHX37Q8IY37 1157 aaKnown RBP13.99□□□□□ -0.17
PTPRF-213ENST00000481019 NSUN7Q8NE18 718 aaKnown RBP13.99□□□□□ -0.17
PTPRF-213ENST00000481019 CRYGNQ8WXF5 182 aa13.99□□□□□ -0.17
PTPRF-213ENST00000481019 KAT2BQ92831 832 aa13.99□□□□□ -0.17
PTPRF-213ENST00000481019 EMID1Q96A84 441 aaPredicted RBP13.99□□□□□ -0.17
PTPRF-213ENST00000481019 VTI1AQ96AJ9 217 aa13.99□□□□□ -0.17
PTPRF-213ENST00000481019 GLT1D1Q96MS3 346 aa13.99□□□□□ -0.17
PTPRF-213ENST00000481019 UIMC1Q96RL1 719 aa13.99□□□□□ -0.17
PTPRF-213ENST00000481019 PKD2L1Q9P0L9 805 aa13.99□□□□□ -0.17
PTPRF-213ENST00000481019 RBM27Q9P2N5 1060 aaKnown RBP13.99□□□□□ -0.17
PTPRF-213ENST00000481019 NR2E3Q9Y5X4 410 aa13.99□□□□□ -0.17
PTPRF-213ENST00000481019 LTBP2Q14767 1821 aa13.99□□□□□ -0.17
PTPRF-213ENST00000481019 SCN10AQ9Y5Y9 1956 aa13.98□□□□□ -0.17
PTPRF-213ENST00000481019 STK36Q9NRP7 1315 aa13.98□□□□□ -0.17
PTPRF-213ENST00000481019 A0A0U1RQG5 324 aaPredicted RBP13.98□□□□□ -0.17
PTPRF-213ENST00000481019 M0R2N6 131 aa13.98□□□□□ -0.17
PTPRF-213ENST00000481019 ARP10275 920 aa13.98□□□□□ -0.17
PTPRF-213ENST00000481019 KCNA2P16389 499 aa13.98□□□□□ -0.17
PTPRF-213ENST00000481019 CPT1AP50416 773 aa13.98□□□□□ -0.17
PTPRF-213ENST00000481019 FAAP100Q0VG06 881 aa13.98□□□□□ -0.17
PTPRF-213ENST00000481019 XRRA1Q6P2D8 792 aa13.98□□□□□ -0.17
PTPRF-213ENST00000481019 CHRDL2Q6WN34 429 aa13.98□□□□□ -0.17
PTPRF-213ENST00000481019 CYFIP1Q7L576 1253 aa13.98□□□□□ -0.17
PTPRF-213ENST00000481019 ANKRD33Q7Z3H0 272 aa13.98□□□□□ -0.17
PTPRF-213ENST00000481019 CCDC83Q8IWF9 413 aa13.98□□□□□ -0.17
PTPRF-213ENST00000481019 TRIM22Q8IYM9 498 aa13.98□□□□□ -0.17
PTPRF-213ENST00000481019 PRO3102Q9H379 93 aa13.98□□□□□ -0.17
PTPRF-213ENST00000481019 C6orf50Q9HD87 102 aa13.98□□□□□ -0.17
PTPRF-213ENST00000481019 SH3GLB2Q9NR46 395 aa13.98□□□□□ -0.17
PTPRF-213ENST00000481019 LIMCH1Q9UPQ0 1083 aa13.98□□□□□ -0.17
PTPRF-213ENST00000481019 COLQQ9Y215 455 aaPredicted RBP13.98□□□□□ -0.17
PTPRF-213ENST00000481019 LAMA3Q16787 3333 aa13.98□□□□□ -0.17
PTPRF-213ENST00000481019 FAM86B1E9PN63 330 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 FIBPO43427 364 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 ZEB2O60315 1214 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 STAM2O75886 525 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 FAM86B2P0C5J1 330 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 ZNF286BP0CG31 522 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 HOXD8P13378 290 aaPredicted RBP13.97□□□□□ -0.17
PTPRF-213ENST00000481019 MAGEA10P43363 369 aaPredicted RBP13.97□□□□□ -0.17
PTPRF-213ENST00000481019 FOSBP53539 338 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 NLRP5P59047 1200 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 ARHGAP4P98171 946 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 AP3B2Q13367 1082 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 ITGA7Q13683 1181 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 LAMC2Q13753 1193 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 NBPF20Q3BBV1 942 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 FAM126BQ8IXS8 530 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 REXO1Q8N1G1 1221 aaKnown RBP13.97□□□□□ -0.17
PTPRF-213ENST00000481019 PPTC7Q8NI37 304 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 OXER1Q8TDS5 423 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 GPRASP2Q96D09 838 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 SPATA33Q96N06 139 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 MXRA8Q9BRK3 442 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 MTG1Q9BT17 334 aaPredicted RBP13.97□□□□□ -0.17
PTPRF-213ENST00000481019 TRPV6Q9H1D0 765 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 JADE2Q9NQC1 790 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 PRDM5Q9NQX1 630 aaPredicted RBP13.97□□□□□ -0.17
PTPRF-213ENST00000481019 POLR3EQ9NVU0 708 aa13.97□□□□□ -0.17
PTPRF-213ENST00000481019 ORC3Q9UBD5 711 aaPredicted RBP13.97□□□□□ -0.17
PTPRF-213ENST00000481019 LAMA2P24043 3122 aaKnown RBP13.96□□□□□ -0.17
PTPRF-213ENST00000481019 IGLV3-22A0A075B6J6 115 aa13.96□□□□□ -0.17
PTPRF-213ENST00000481019 CABYRO75952 493 aa13.96□□□□□ -0.17
PTPRF-213ENST00000481019 FOSP01100 380 aaPredicted RBP13.96□□□□□ -0.17
PTPRF-213ENST00000481019 CD4P01730 458 aa13.96□□□□□ -0.17
PTPRF-213ENST00000481019 TGFB3P10600 412 aa13.96□□□□□ -0.17
PTPRF-213ENST00000481019 MDM2Q00987 491 aaPredicted RBP13.96□□□□□ -0.17
PTPRF-213ENST00000481019 SP4Q02446 784 aa13.96□□□□□ -0.17
PTPRF-213ENST00000481019 ITGB3BPQ13352 177 aaPredicted RBP13.96□□□□□ -0.17
PTPRF-213ENST00000481019 GNPTABQ3T906 1256 aa13.96□□□□□ -0.17
PTPRF-213ENST00000481019 KCNV1Q6PIU1 500 aa13.96□□□□□ -0.17
PTPRF-213ENST00000481019 CPLX2Q6PUV4 134 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms