RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 EMC3Q9P0I2 261 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 KIF17Q9P2E2 1029 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 HOOK1Q9UJC3 728 aaKnown RBP4.22□□□□□ -1.73
LSM2-211ENST00000475835 ADAM21Q9UKJ8 722 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 RIMKLBQ9ULI2 386 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 STRIP2Q9ULQ0 834 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 ADAMTS8Q9UP79 889 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 LIMCH1Q9UPQ0 1083 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 R3HDM2Q9Y2K5 976 aaKnown RBP4.22□□□□□ -1.73
LSM2-211ENST00000475835 SNX8Q9Y5X2 465 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 SLC4A7Q9Y6M7 1214 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 KIF24Q5T7B8 1368 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 WDR7Q9Y4E6 1490 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 SHPRHQ149N8 1683 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 QRICH2Q9H0J4 1663 aa4.22□□□□□ -1.73
LSM2-211ENST00000475835 CPSF1Q10570 1443 aaKnown RBP4.21□□□□□ -1.73
LSM2-211ENST00000475835 ABCC1P33527 1531 aa4.21□□□□□ -1.73
LSM2-211ENST00000475835 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.21□□□□□ -1.734e-6■□□□□ 8.1
LSM2-211ENST00000475835 ZCCHC11Q5TAX3 1644 aaKnown RBP4.21□□□□□ -1.73
LSM2-211ENST00000475835 MAP3K4Q9Y6R4 1608 aa4.21□□□□□ -1.73
LSM2-211ENST00000475835 C17orf113A0A1B0GUU1 675 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 LRRD1A4D1F6 860 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 CARNS1A5YM72 827 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 A6NHS1 94 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 OR6C65A6NJZ3 312 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 GOLGA8CPA6NN73 597 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 CCDC169A6NNP5 214 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 UBAP1LF5GYI3 381 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 SPECC1L-ADORA2AF8WAN1 911 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 TNFRSF10AO00220 468 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 EBAG9O00559 213 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 STRNO43815 780 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 MGRN1O60291 552 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 SMIM24O75264 130 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 TOMM70O94826 608 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 ECDO95905 644 aaPredicted RBP4.21□□□□□ -1.74
LSM2-211ENST00000475835 SERPINC1P01008 464 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 DLATP10515 647 aaKnown RBP4.21□□□□□ -1.74
LSM2-211ENST00000475835 PRLRP16471 622 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 ZNF3P17036 446 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 IL32P24001 234 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 PPP2R1AP30153 589 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 RPL9P32969 192 aaKnown RBP4.21□□□□□ -1.74
LSM2-211ENST00000475835 KRT9P35527 623 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 CETN2P41208 172 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 POLD2P49005 469 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 PPM1FP49593 454 aaPredicted RBP4.21□□□□□ -1.74
LSM2-211ENST00000475835 GPC3P51654 580 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 HNRNPMP52272 730 aaKnown RBP eCLIP4.21□□□□□ -1.74
LSM2-211ENST00000475835 MTTPP55157 894 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 MDM2Q00987 491 aaPredicted RBP4.21□□□□□ -1.74
LSM2-211ENST00000475835 NIPAL4Q0D2K0 466 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 AP1B1Q10567 949 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 MTMR3Q13615 1198 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 BLMHQ13867 455 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 IDI1Q13907 227 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 STK11Q15831 433 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 CRY1Q16526 586 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 CFAP100Q494V2 611 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 ANKDD1AQ495B1 522 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 CCDC40Q4G0X9 1142 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 FBXO43Q4G163 708 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 PLEKHO1Q53GL0 409 aaPredicted RBP4.21□□□□□ -1.74
LSM2-211ENST00000475835 CMPK2Q5EBM0 449 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 TRAPPC3LQ5T215 181 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 RNASEH2BQ5TBB1 312 aaKnown RBP4.21□□□□□ -1.74
LSM2-211ENST00000475835 GKAP1Q5VSY0 366 aaPredicted RBP4.21□□□□□ -1.74
LSM2-211ENST00000475835 NEK5Q6P3R8 708 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 DRICH1Q6PGQ1 229 aaPredicted RBP4.21□□□□□ -1.74
LSM2-211ENST00000475835 CRELD2Q6UXH1 353 aaPredicted RBP4.21□□□□□ -1.74
LSM2-211ENST00000475835 KSR2Q6VAB6 950 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 C3orf62Q6ZUJ4 267 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 RTL10Q7L3V2 364 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 ATG9AQ7Z3C6 839 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 FERMT3Q86UX7 667 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 NLRP14Q86W24 1093 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 MCF2L2Q86YR7 1114 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 SLC44A2Q8IWA5 706 aaPredicted RBP4.21□□□□□ -1.74
LSM2-211ENST00000475835 CKAP2LQ8IYA6 745 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 TMCO5AQ8N6Q1 288 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 TMEM87AQ8NBN3 555 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 BBOF1Q8ND07 529 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 NSUN7Q8NE18 718 aaKnown RBP4.21□□□□□ -1.74
LSM2-211ENST00000475835 KIFAP3Q92845 792 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 CASP10Q92851 521 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 E2F7Q96AV8 911 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 FAM149B1Q96BN6 582 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 MED30Q96HR3 178 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 ART5Q96L15 291 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 CCDC42Q96M95 316 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 CATSPER2Q96P56 530 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.21□□□□□ -1.74
LSM2-211ENST00000475835 AIFM2Q9BRQ8 373 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 ISCA1Q9BUE6 129 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 NUF2Q9BZD4 464 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 BICC1Q9H694 974 aaKnown RBP4.21□□□□□ -1.74
LSM2-211ENST00000475835 EHMT1Q9H9B1 1298 aa4.21□□□□□ -1.74
LSM2-211ENST00000475835 ACTR5Q9H9F9 607 aaPredicted RBP4.21□□□□□ -1.74
LSM2-211ENST00000475835 NGRNQ9NPE2 291 aaKnown RBP4.21□□□□□ -1.74
LSM2-211ENST00000475835 ST7Q9NRC1 585 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms