RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 MYADML2A6NDP7 307 aa19.34■□□□□ 0.69
SCAF11-206ENST00000474828 MOXD2PA6NHM9 499 aa19.34■□□□□ 0.69
SCAF11-206ENST00000474828 MMP1P03956 469 aa19.34■□□□□ 0.69
SCAF11-206ENST00000474828 USP11P51784 963 aa19.34■□□□□ 0.69
SCAF11-206ENST00000474828 SP2Q02086 613 aa19.34■□□□□ 0.69
SCAF11-206ENST00000474828 CEP55Q53EZ4 464 aa19.34■□□□□ 0.69
SCAF11-206ENST00000474828 GJC2Q5T442 439 aaPredicted RBP19.34■□□□□ 0.69
SCAF11-206ENST00000474828 C1orf53Q5VUE5 145 aa19.34■□□□□ 0.69
SCAF11-206ENST00000474828 NECAB2Q7Z6G3 386 aa19.34■□□□□ 0.69
SCAF11-206ENST00000474828 FBXO18Q8NFZ0 1043 aa19.34■□□□□ 0.69
SCAF11-206ENST00000474828 RASGRP4Q8TDF6 673 aa19.34■□□□□ 0.69
SCAF11-206ENST00000474828 DIS3LQ8TF46 1054 aaKnown RBP19.34■□□□□ 0.69
SCAF11-206ENST00000474828 PAWRQ96IZ0 340 aaKnown RBP19.34■□□□□ 0.69
SCAF11-206ENST00000474828 CDHR1Q96JP9 859 aa19.34■□□□□ 0.69
SCAF11-206ENST00000474828 MXRA8Q9BRK3 442 aa19.34■□□□□ 0.69
SCAF11-206ENST00000474828 CYP3A7-CYP3A51PA0A087WV96 503 aa19.33■□□□□ 0.68
SCAF11-206ENST00000474828 CYP3A7P24462 503 aa19.33■□□□□ 0.68
SCAF11-206ENST00000474828 SNX17Q15036 470 aa19.33■□□□□ 0.68
SCAF11-206ENST00000474828 FSCN1Q16658 493 aaKnown RBP19.33■□□□□ 0.68
SCAF11-206ENST00000474828 LY6KQ17RY6 165 aa19.33■□□□□ 0.68
SCAF11-206ENST00000474828 MYSM1Q5VVJ2 828 aa19.33■□□□□ 0.68
SCAF11-206ENST00000474828 PCSK9Q8NBP7 692 aaKnown RBP19.33■□□□□ 0.68
SCAF11-206ENST00000474828 PGBD1Q96JS3 809 aa19.33■□□□□ 0.68
SCAF11-206ENST00000474828 MBOAT7Q96N66 472 aa19.33■□□□□ 0.68
SCAF11-206ENST00000474828 SPC25Q9HBM1 224 aa19.33■□□□□ 0.68
SCAF11-206ENST00000474828 MRVI1Q9Y6F6 885 aa19.33■□□□□ 0.68
SCAF11-206ENST00000474828 DYNC1LI2O43237 492 aaPredicted RBP19.32■□□□□ 0.68
SCAF11-206ENST00000474828 GH1P01241 217 aa19.32■□□□□ 0.68
SCAF11-206ENST00000474828 KCNA2P16389 499 aa19.32■□□□□ 0.68
SCAF11-206ENST00000474828 UBA1P22314 1058 aaKnown RBP19.32■□□□□ 0.68
SCAF11-206ENST00000474828 PTGS1P23219 599 aa19.32■□□□□ 0.68
SCAF11-206ENST00000474828 IRX5P78411 483 aaPredicted RBP19.32■□□□□ 0.68
SCAF11-206ENST00000474828 LAMC2Q13753 1193 aa19.32■□□□□ 0.68
SCAF11-206ENST00000474828 CELF3Q5SZQ8 465 aaKnown RBP19.32■□□□□ 0.68
SCAF11-206ENST00000474828 KRT40Q6A162 431 aa19.32■□□□□ 0.68
SCAF11-206ENST00000474828 MOXD1Q6UVY6 613 aa19.32■□□□□ 0.68
SCAF11-206ENST00000474828 KRT25Q7Z3Z0 450 aa19.32■□□□□ 0.68
SCAF11-206ENST00000474828 NLRX1Q86UT6 975 aa19.32■□□□□ 0.68
SCAF11-206ENST00000474828 COPS5Q92905 334 aa19.32■□□□□ 0.68
SCAF11-206ENST00000474828 LENG9Q96B70 501 aa19.32■□□□□ 0.68
SCAF11-206ENST00000474828 INTS4Q96HW7 963 aaKnown RBP19.32■□□□□ 0.68
SCAF11-206ENST00000474828 AP5M1Q9H0R1 490 aa19.32■□□□□ 0.68
SCAF11-206ENST00000474828 C11orf49Q9H6J7 331 aa19.32■□□□□ 0.68
SCAF11-206ENST00000474828 RTEL1Q9NZ71 1219 aa19.32■□□□□ 0.68
SCAF11-206ENST00000474828 KBTBD13C9JR72 458 aa19.31■□□□□ 0.68
SCAF11-206ENST00000474828 FAM86B1E9PN63 330 aa19.31■□□□□ 0.68
SCAF11-206ENST00000474828 FAM86B2P0C5J1 330 aa19.31■□□□□ 0.68
SCAF11-206ENST00000474828 C6orf222P0C671 652 aaPredicted RBP19.31■□□□□ 0.68
SCAF11-206ENST00000474828 CPT1AP50416 773 aa19.31■□□□□ 0.68
SCAF11-206ENST00000474828 ACLYP53396 1101 aa19.31■□□□□ 0.68
SCAF11-206ENST00000474828 NEDD9Q14511 834 aa19.31■□□□□ 0.68
SCAF11-206ENST00000474828 KCNA10Q16322 511 aa19.31■□□□□ 0.68
SCAF11-206ENST00000474828 GNASQ5JWF2 1037 aa19.31■□□□□ 0.68
SCAF11-206ENST00000474828 GIMAP8Q8ND71 665 aaPredicted RBP19.31■□□□□ 0.68
SCAF11-206ENST00000474828 CYP2W1Q8TAV3 490 aa19.31■□□□□ 0.68
SCAF11-206ENST00000474828 OXER1Q8TDS5 423 aa19.31■□□□□ 0.68
SCAF11-206ENST00000474828 ZFP91Q96JP5 570 aaPredicted RBP19.31■□□□□ 0.68
SCAF11-206ENST00000474828 KCNH7Q9NS40 1196 aa19.31■□□□□ 0.68
SCAF11-206ENST00000474828 ELP1O95163 1332 aa19.3■□□□□ 0.68
SCAF11-206ENST00000474828 KPNA6O60684 536 aa19.3■□□□□ 0.68
SCAF11-206ENST00000474828 ASGR1P07306 291 aa19.3■□□□□ 0.68
SCAF11-206ENST00000474828 MTMR1Q13613 665 aa19.3■□□□□ 0.68
SCAF11-206ENST00000474828 METTL7BQ6UX53 244 aa19.3■□□□□ 0.68
SCAF11-206ENST00000474828 OR6J1Q8NGC5 347 aa19.3■□□□□ 0.68
SCAF11-206ENST00000474828 PPTC7Q8NI37 304 aa19.3■□□□□ 0.68
SCAF11-206ENST00000474828 TBCKQ8TEA7 893 aa19.3■□□□□ 0.68
SCAF11-206ENST00000474828 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.3■□□□□ 0.68
SCAF11-206ENST00000474828 A0A1W2PQ45 241 aaPredicted RBP19.29■□□□□ 0.68
SCAF11-206ENST00000474828 A0A1W2PQY0 241 aa19.29■□□□□ 0.68
SCAF11-206ENST00000474828 K7ELQ4 463 aaPredicted RBP19.29■□□□□ 0.68
SCAF11-206ENST00000474828 ATP9AO75110 1047 aa19.29■□□□□ 0.68
SCAF11-206ENST00000474828 CABYRO75952 493 aa19.29■□□□□ 0.68
SCAF11-206ENST00000474828 KRT2P35908 639 aa19.29■□□□□ 0.68
SCAF11-206ENST00000474828 NONOQ15233 471 aaKnown RBP eCLIP19.29■□□□□ 0.68
SCAF11-206ENST00000474828 SLC43A3Q8NBI5 491 aa19.29■□□□□ 0.68
SCAF11-206ENST00000474828 C8orf76Q96K31 380 aa19.29■□□□□ 0.68
SCAF11-206ENST00000474828 KIF3AQ9Y496 699 aa19.29■□□□□ 0.68
SCAF11-206ENST00000474828 MYH7BA7E2Y1 1941 aa19.29■□□□□ 0.68
SCAF11-206ENST00000474828 NFASCO94856 1347 aa19.28■□□□□ 0.68
SCAF11-206ENST00000474828 BTBD18B2RXH4 712 aa19.28■□□□□ 0.68
SCAF11-206ENST00000474828 PPFIA4O75335 1185 aa19.28■□□□□ 0.68
SCAF11-206ENST00000474828 GGPS1O95749 300 aa19.28■□□□□ 0.68
SCAF11-206ENST00000474828 PURAQ00577 322 aaKnown RBP19.28■□□□□ 0.68
SCAF11-206ENST00000474828 BEX3Q00994 111 aa19.28■□□□□ 0.68
SCAF11-206ENST00000474828 SETQ01105 290 aaPredicted RBP19.28■□□□□ 0.68
SCAF11-206ENST00000474828 NR5A1Q13285 461 aa19.28■□□□□ 0.68
SCAF11-206ENST00000474828 TRIM29Q14134 588 aa19.28■□□□□ 0.68
SCAF11-206ENST00000474828 Q4G0T1 1027 aa19.28■□□□□ 0.68
SCAF11-206ENST00000474828 EARS2Q5JPH6 523 aaKnown RBP19.28■□□□□ 0.68
SCAF11-206ENST00000474828 PPP4R3AQ6IN85 833 aa19.28■□□□□ 0.68
SCAF11-206ENST00000474828 DHX37Q8IY37 1157 aaKnown RBP19.28■□□□□ 0.68
SCAF11-206ENST00000474828 DIS3L2Q8IYB7 885 aaKnown RBP19.28■□□□□ 0.68
SCAF11-206ENST00000474828 SEZ6LQ9BYH1 1024 aa19.28■□□□□ 0.68
SCAF11-206ENST00000474828 FOXP1Q9H334 677 aaPredicted RBP19.28■□□□□ 0.68
SCAF11-206ENST00000474828 BCAS3Q9H6U6 928 aa19.28■□□□□ 0.68
SCAF11-206ENST00000474828 AGO4Q9HCK5 861 aaKnown RBP19.28■□□□□ 0.68
SCAF11-206ENST00000474828 POLR3EQ9NVU0 708 aa19.28■□□□□ 0.68
SCAF11-206ENST00000474828 DHX15O43143 795 aaKnown RBP19.27■□□□□ 0.68
SCAF11-206ENST00000474828 ZEB2O60315 1214 aa19.27■□□□□ 0.68
SCAF11-206ENST00000474828 MMP3P08254 477 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms