RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	MYSM1	Q5VVJ2	828 aa		11.26	□□□□□ -0.61
MCF2L-223	ENST00000473345	GJD3	Q8N144	294 aa		11.26	□□□□□ -0.61
MCF2L-223	ENST00000473345	ENAH	Q8N8S7	591 aa	Predicted RBP	11.26	□□□□□ -0.61
MCF2L-223	ENST00000473345	PNMA1	Q8ND90	353 aa		11.26	□□□□□ -0.61
MCF2L-223	ENST00000473345	PPTC7	Q8NI37	304 aa		11.26	□□□□□ -0.61
MCF2L-223	ENST00000473345	NEK9	Q8TD19	979 aa		11.26	□□□□□ -0.61
MCF2L-223	ENST00000473345	NSUN6	Q8TEA1	469 aa	Known RBP	11.26	□□□□□ -0.61
MCF2L-223	ENST00000473345	SENP2	Q9HC62	589 aa		11.26	□□□□□ -0.61
MCF2L-223	ENST00000473345	VAT1L	Q9HCJ6	419 aa		11.26	□□□□□ -0.61
MCF2L-223	ENST00000473345	UBA1	P22314	1058 aa	Known RBP	11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	LTBR	P36941	435 aa		11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	GHRHR	Q02643	423 aa		11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	DLX2	Q07687	328 aa	Predicted RBP	11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	SEMA3F	Q13275	785 aa		11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	STXBP2	Q15833	593 aa		11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	PLEKHG4	Q58EX7	1191 aa		11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	TCEAL5	Q5H9L2	206 aa		11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	CELF3	Q5SZQ8	465 aa	Known RBP	11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	GPATCH4	Q5T3I0	446 aa	Known RBP	11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	MFSD6	Q6ZSS7	791 aa		11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	SERINC5	Q86VE9	423 aa		11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	DGKH	Q86XP1	1220 aa		11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	MYOCD	Q8IZQ8	938 aa		11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	C7orf31	Q8N865	590 aa		11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	FBXO22	Q8NEZ5	403 aa		11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	MTMR8	Q96EF0	704 aa		11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	CRBN	Q96SW2	442 aa		11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	PDCD2L	Q9BRP1	358 aa		11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	ZSWIM5	Q9P217	1185 aa		11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	HCN4	Q9Y3Q4	1203 aa		11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	MRVI1	Q9Y6F6	885 aa		11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	ABCB11	O95342	1321 aa		11.25	□□□□□ -0.61
MCF2L-223	ENST00000473345	POTEB3	A0JP26	581 aa		11.24	□□□□□ -0.61
MCF2L-223	ENST00000473345	TREH	O43280	583 aa		11.24	□□□□□ -0.61
MCF2L-223	ENST00000473345	EIF3J	O75822	258 aa	Known RBP	11.24	□□□□□ -0.61
MCF2L-223	ENST00000473345	GGPS1	O95749	300 aa		11.24	□□□□□ -0.61
MCF2L-223	ENST00000473345	CFB	P00751	764 aa		11.24	□□□□□ -0.61
MCF2L-223	ENST00000473345	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.24	□□□□□ -0.61	7e-9	■■■■■ 32
MCF2L-223	ENST00000473345	THPO	P40225	353 aa		11.24	□□□□□ -0.61
MCF2L-223	ENST00000473345	IKBKE	Q14164	716 aa		11.24	□□□□□ -0.61
MCF2L-223	ENST00000473345	ARHGEF16	Q5VV41	709 aa		11.24	□□□□□ -0.61
MCF2L-223	ENST00000473345	POTEB	Q6S5H4	581 aa		11.24	□□□□□ -0.61
MCF2L-223	ENST00000473345	TRIM50	Q86XT4	487 aa		11.24	□□□□□ -0.61
MCF2L-223	ENST00000473345	CCDC155	Q8N6L0	562 aa		11.24	□□□□□ -0.61
MCF2L-223	ENST00000473345	MRPL38	Q96DV4	380 aa	Known RBP	11.24	□□□□□ -0.61
MCF2L-223	ENST00000473345	IWS1	Q96ST2	819 aa		11.24	□□□□□ -0.61
MCF2L-223	ENST00000473345	PHOX2B	Q99453	314 aa		11.24	□□□□□ -0.61
MCF2L-223	ENST00000473345	TAF6L	Q9Y6J9	622 aa		11.24	□□□□□ -0.61
MCF2L-223	ENST00000473345	MICAL3	Q7RTP6	2002 aa		11.24	□□□□□ -0.61
MCF2L-223	ENST00000473345	LAMA4	Q16363	1823 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	PRR33	A8MZF0	331 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	RSPH10B2	B2RC85	870 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	CYTH3	O43739	400 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	CTSH	P09668	335 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	RSPH10B	P0C881	870 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	SMIM10L2A	P0DMW4	78 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	SMIM10L2B	P0DMW5	78 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	MYCL	P12524	364 aa	Predicted RBP	11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	SDS	P20132	328 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	ADAM17	P78536	824 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	ZP2	Q05996	745 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	LAMC2	Q13753	1193 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	PGM5	Q15124	567 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	SEC23A	Q15436	765 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	STOX1	Q6ZVD7	989 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	CYB5R4	Q7L1T6	521 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	VSIG10L	Q86VR7	867 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	FBXO11	Q86XK2	927 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	DHX37	Q8IY37	1157 aa	Known RBP	11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	TOP1MT	Q969P6	601 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	SPATA33	Q96N06	139 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	LNPK	Q9C0E8	428 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	RNPEP	Q9H4A4	650 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	MAD2L2	Q9UI95	211 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	INSL6	Q9Y581	213 aa		11.23	□□□□□ -0.61
MCF2L-223	ENST00000473345	C19orf67	A6NJJ6	358 aa		11.22	□□□□□ -0.61
MCF2L-223	ENST00000473345		H3BNC9	293 aa		11.22	□□□□□ -0.61
MCF2L-223	ENST00000473345	LINC01565	O15544	149 aa		11.22	□□□□□ -0.61
MCF2L-223	ENST00000473345	UPP2	O95045	317 aa		11.22	□□□□□ -0.61
MCF2L-223	ENST00000473345	LGALS2	P05162	132 aa		11.22	□□□□□ -0.61
MCF2L-223	ENST00000473345	MRPS9	P82933	396 aa	Known RBP	11.22	□□□□□ -0.61
MCF2L-223	ENST00000473345	CAMK1	Q14012	370 aa		11.22	□□□□□ -0.61
MCF2L-223	ENST00000473345	COL9A3	Q14050	684 aa	Predicted RBP	11.22	□□□□□ -0.61
MCF2L-223	ENST00000473345	ASPRV1	Q53RT3	343 aa		11.22	□□□□□ -0.61
MCF2L-223	ENST00000473345	ESR2	Q92731	530 aa		11.22	□□□□□ -0.61
MCF2L-223	ENST00000473345	ZBTB10	Q96DT7	871 aa		11.22	□□□□□ -0.61
MCF2L-223	ENST00000473345	RC3H2	Q9HBD1	1191 aa	Known RBP	11.22	□□□□□ -0.61
MCF2L-223	ENST00000473345	SETD4	Q9NVD3	440 aa		11.22	□□□□□ -0.61
MCF2L-223	ENST00000473345	PNMA2	Q9UL42	364 aa		11.22	□□□□□ -0.61
MCF2L-223	ENST00000473345	MRPL11	Q9Y3B7	192 aa	Known RBP	11.22	□□□□□ -0.61
MCF2L-223	ENST00000473345	GRM6	O15303	877 aa		11.21	□□□□□ -0.61
MCF2L-223	ENST00000473345	PPFIA4	O75335	1185 aa		11.21	□□□□□ -0.61
MCF2L-223	ENST00000473345	CENPB	P07199	599 aa	Predicted RBP	11.21	□□□□□ -0.61
MCF2L-223	ENST00000473345	SSTR3	P32745	418 aa	Predicted RBP	11.21	□□□□□ -0.61
MCF2L-223	ENST00000473345	IRS1	P35568	1242 aa		11.21	□□□□□ -0.61
MCF2L-223	ENST00000473345	NHLH1	Q02575	133 aa		11.21	□□□□□ -0.61
MCF2L-223	ENST00000473345	HYAL1	Q12794	435 aa		11.21	□□□□□ -0.61
MCF2L-223	ENST00000473345	GPM6B	Q13491	265 aa		11.21	□□□□□ -0.61

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