RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 PPFIA4O75335 1185 aa8□□□□□ -1.13
SF3A3-205ENST00000470585 TOP1P11387 765 aaKnown RBP8□□□□□ -1.13
SF3A3-205ENST00000470585 HOXC8P31273 242 aa8□□□□□ -1.13
SF3A3-205ENST00000470585 RPS6P62753 249 aaKnown RBP8□□□□□ -1.13
SF3A3-205ENST00000470585 ARHGAP1Q07960 439 aa8□□□□□ -1.13
SF3A3-205ENST00000470585 SMAD4Q13485 552 aaKnown RBP8□□□□□ -1.13
SF3A3-205ENST00000470585 LAMC2Q13753 1193 aa8□□□□□ -1.13
SF3A3-205ENST00000470585 EPC2Q52LR7 807 aa8□□□□□ -1.13
SF3A3-205ENST00000470585 PLEKHG4Q58EX7 1191 aa8□□□□□ -1.13
SF3A3-205ENST00000470585 TMEM63BQ5T3F8 832 aa8□□□□□ -1.13
SF3A3-205ENST00000470585 TRAF7Q6Q0C0 670 aa8□□□□□ -1.13
SF3A3-205ENST00000470585 HFE2Q6ZVN8 426 aa8□□□□□ -1.13
SF3A3-205ENST00000470585 FBXO11Q86XK2 927 aa8□□□□□ -1.13
SF3A3-205ENST00000470585 MCF2L2Q86YR7 1114 aa8□□□□□ -1.13
SF3A3-205ENST00000470585 NSUN6Q8TEA1 469 aaKnown RBP8□□□□□ -1.13
SF3A3-205ENST00000470585 KAT2BQ92831 832 aa8□□□□□ -1.13
SF3A3-205ENST00000470585 EDAQ92838 391 aa8□□□□□ -1.13
SF3A3-205ENST00000470585 PPP2R3CQ969Q6 453 aa8□□□□□ -1.13
SF3A3-205ENST00000470585 C11orf84Q9BUA3 381 aaPredicted RBP8□□□□□ -1.13
SF3A3-205ENST00000470585 MAP3K20Q9NYL2 800 aaKnown RBP8□□□□□ -1.13
SF3A3-205ENST00000470585 ZMYM6O95789 1325 aa8□□□□□ -1.13
SF3A3-205ENST00000470585 TTC41PQ6P2S7 1318 aa8□□□□□ -1.13
SF3A3-205ENST00000470585 SNHG28P0DPA3 235 aa7.99□□□□□ -1.13
SF3A3-205ENST00000470585 TGFB3P10600 412 aa7.99□□□□□ -1.13
SF3A3-205ENST00000470585 PTGS1P23219 599 aa7.99□□□□□ -1.13
SF3A3-205ENST00000470585 GHRHRQ02643 423 aa7.99□□□□□ -1.13
SF3A3-205ENST00000470585 ALX1Q15699 326 aa7.99□□□□□ -1.13
SF3A3-205ENST00000470585 STXBP2Q15833 593 aa7.99□□□□□ -1.13
SF3A3-205ENST00000470585 CCDC96Q2M329 555 aa7.99□□□□□ -1.13
SF3A3-205ENST00000470585 NAALADL2Q58DX5 795 aa7.99□□□□□ -1.13
SF3A3-205ENST00000470585 SLC30A10Q6XR72 485 aa7.99□□□□□ -1.13
SF3A3-205ENST00000470585 SERINC5Q86VE9 423 aa7.99□□□□□ -1.13
SF3A3-205ENST00000470585 AFG1LQ8WV93 481 aa7.99□□□□□ -1.13
SF3A3-205ENST00000470585 SEPT8Q92599 483 aa7.99□□□□□ -1.13
SF3A3-205ENST00000470585 TOP1MTQ969P6 601 aa7.99□□□□□ -1.13
SF3A3-205ENST00000470585 PLVAPQ9BX97 442 aa7.99□□□□□ -1.13
SF3A3-205ENST00000470585 IL17RBQ9NRM6 502 aa7.99□□□□□ -1.13
SF3A3-205ENST00000470585 NLRC5Q86WI3 1866 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 RSPH10B2B2RC85 870 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 EIF3JO75822 258 aaKnown RBP7.98□□□□□ -1.13
SF3A3-205ENST00000470585 EYA4O95677 639 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 CHGBP05060 677 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 RPLP2P05387 115 aaKnown RBP7.98□□□□□ -1.13
SF3A3-205ENST00000470585 RSPH10BP0C881 870 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 PDHBP11177 359 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 CALML3P27482 149 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 IRS1P35568 1242 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 PSEN2P49810 448 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 ZNF543Q08ER8 600 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 GPM6BQ13491 265 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 MFSD10Q14728 455 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 CBX2Q14781 532 aaPredicted RBP7.98□□□□□ -1.13
SF3A3-205ENST00000470585 CCDC178Q5BJE1 867 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 TCEAL5Q5H9L2 206 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 ZMYM1Q5SVZ6 1142 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 ZNF618Q5T7W0 954 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 SPRED2Q7Z698 418 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 SUGP1Q8IWZ8 645 aaKnown RBP7.98□□□□□ -1.13
SF3A3-205ENST00000470585 TMEM192Q8IY95 271 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 CLP1Q92989 425 aaKnown RBP7.98□□□□□ -1.13
SF3A3-205ENST00000470585 YME1L1Q96TA2 773 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 C17orf80Q9BSJ5 609 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 HDAC6Q9UBN7 1215 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 MTUS1Q9ULD2 1270 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 ABCB11O95342 1321 aa7.98□□□□□ -1.13
SF3A3-205ENST00000470585 PROB1E7EW31 1015 aa7.97□□□□□ -1.13
SF3A3-205ENST00000470585 H3BQ06 376 aaPredicted RBP7.97□□□□□ -1.13
SF3A3-205ENST00000470585 M0R2C6 588 aa7.97□□□□□ -1.13
SF3A3-205ENST00000470585 MBTPS2O43462 519 aa7.97□□□□□ -1.13
SF3A3-205ENST00000470585 ARIH2O95376 493 aa7.97□□□□□ -1.13
SF3A3-205ENST00000470585 GNAT1P11488 350 aa7.97□□□□□ -1.13
SF3A3-205ENST00000470585 TRAF1Q13077 416 aa7.97□□□□□ -1.13
SF3A3-205ENST00000470585 MBTPS1Q14703 1052 aa7.97□□□□□ -1.13
SF3A3-205ENST00000470585 KIAA0753Q2KHM9 967 aa7.97□□□□□ -1.13
SF3A3-205ENST00000470585 TRIM67Q6ZTA4 783 aa7.97□□□□□ -1.13
SF3A3-205ENST00000470585 RPAINQ86UA6 219 aa7.97□□□□□ -1.13
SF3A3-205ENST00000470585 MYOCDQ8IZQ8 938 aa7.97□□□□□ -1.13
SF3A3-205ENST00000470585 DBF4BQ8NFT6 615 aa7.97□□□□□ -1.13
SF3A3-205ENST00000470585 PANK1Q8TE04 598 aa7.97□□□□□ -1.13
SF3A3-205ENST00000470585 COPS5Q92905 334 aa7.97□□□□□ -1.13
SF3A3-205ENST00000470585 P2RX5Q93086 422 aa7.97□□□□□ -1.13
SF3A3-205ENST00000470585 PURBQ96QR8 312 aaKnown RBP7.97□□□□□ -1.13
SF3A3-205ENST00000470585 DDX41Q9UJV9 622 aaKnown RBP7.97□□□□□ -1.13
SF3A3-205ENST00000470585 PCDHB13Q9Y5F0 798 aa7.97□□□□□ -1.13
SF3A3-205ENST00000470585 DDX49Q9Y6V7 483 aaKnown RBP7.97□□□□□ -1.13
SF3A3-205ENST00000470585 LOC730098B7Z3J9 87 aa7.96□□□□□ -1.14
SF3A3-205ENST00000470585 RANBP6O60518 1105 aaKnown RBP7.96□□□□□ -1.14
SF3A3-205ENST00000470585 MMP1P03956 469 aa7.96□□□□□ -1.14
SF3A3-205ENST00000470585 BMPR1AP36894 532 aa7.96□□□□□ -1.14
SF3A3-205ENST00000470585 LTBRP36941 435 aa7.96□□□□□ -1.14
SF3A3-205ENST00000470585 COASYQ13057 564 aa7.96□□□□□ -1.14
SF3A3-205ENST00000470585 LY6KQ17RY6 165 aa7.96□□□□□ -1.14
SF3A3-205ENST00000470585 FAM26DQ5JW98 314 aa7.96□□□□□ -1.14
SF3A3-205ENST00000470585 IER5LQ5T953 404 aa7.96□□□□□ -1.14
SF3A3-205ENST00000470585 ERMP1Q7Z2K6 904 aa7.96□□□□□ -1.14
SF3A3-205ENST00000470585 DGKHQ86XP1 1220 aa7.96□□□□□ -1.14
SF3A3-205ENST00000470585 RNF135Q8IUD6 432 aa7.96□□□□□ -1.14
SF3A3-205ENST00000470585 DHX37Q8IY37 1157 aaKnown RBP7.96□□□□□ -1.14
SF3A3-205ENST00000470585 STK11IPQ8N1F8 1099 aa7.96□□□□□ -1.14
SF3A3-205ENST00000470585 FBXL6Q8N531 539 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms