RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 GOLGA6L22H0YM25 854 aa13.41□□□□□ -0.26
RNF13-208ENST00000467996 TBX3O15119 743 aa13.41□□□□□ -0.26
RNF13-208ENST00000467996 MSH4O15457 936 aa13.41□□□□□ -0.26
RNF13-208ENST00000467996 EIF3JO75822 258 aaKnown RBP13.41□□□□□ -0.26
RNF13-208ENST00000467996 ARP10275 920 aa13.41□□□□□ -0.26
RNF13-208ENST00000467996 CYP2B6P20813 491 aa13.41□□□□□ -0.26
RNF13-208ENST00000467996 MCM4P33991 863 aa13.41□□□□□ -0.26
RNF13-208ENST00000467996 PRPHP41219 470 aa13.41□□□□□ -0.26
RNF13-208ENST00000467996 ME1P48163 572 aa13.41□□□□□ -0.26
RNF13-208ENST00000467996 PRKCZQ05513 592 aa13.41□□□□□ -0.26
RNF13-208ENST00000467996 MTMR1Q13613 665 aa13.41□□□□□ -0.26
RNF13-208ENST00000467996 ARL6IP4Q66PJ3 421 aaKnown RBP13.41□□□□□ -0.26
RNF13-208ENST00000467996 MAMDC4Q6UXC1 1216 aa13.41□□□□□ -0.26
RNF13-208ENST00000467996 NLRX1Q86UT6 975 aa13.41□□□□□ -0.26
RNF13-208ENST00000467996 JMYQ8N9B5 988 aa13.41□□□□□ -0.26
RNF13-208ENST00000467996 HAS1Q92839 578 aa13.41□□□□□ -0.26
RNF13-208ENST00000467996 GPRASP2Q96D09 838 aa13.41□□□□□ -0.26
RNF13-208ENST00000467996 SYNGAP1Q96PV0 1343 aa13.4□□□□□ -0.26
RNF13-208ENST00000467996 PRPF40AO75400 957 aaKnown RBP13.4□□□□□ -0.26
RNF13-208ENST00000467996 GRIN1Q05586 938 aa13.4□□□□□ -0.26
RNF13-208ENST00000467996 SEMA3FQ13275 785 aa13.4□□□□□ -0.26
RNF13-208ENST00000467996 IL17AQ16552 155 aa13.4□□□□□ -0.26
RNF13-208ENST00000467996 CCL14Q16627 93 aa13.4□□□□□ -0.26
RNF13-208ENST00000467996 GNPTABQ3T906 1256 aa13.4□□□□□ -0.26
RNF13-208ENST00000467996 EEPD1Q7L9B9 569 aa13.4□□□□□ -0.26
RNF13-208ENST00000467996 FBXO16Q8IX29 292 aaPredicted RBP13.4□□□□□ -0.26
RNF13-208ENST00000467996 SLFN12Q8IYM2 578 aa13.4□□□□□ -0.26
RNF13-208ENST00000467996 MSL3Q8N5Y2 521 aaKnown RBP13.4□□□□□ -0.26
RNF13-208ENST00000467996 KRI1Q8N9T8 703 aaKnown RBP13.4□□□□□ -0.26
RNF13-208ENST00000467996 GJA10Q969M2 543 aa13.4□□□□□ -0.26
RNF13-208ENST00000467996 FERMT2Q96AC1 680 aa13.4□□□□□ -0.26
RNF13-208ENST00000467996 UIMC1Q96RL1 719 aa13.4□□□□□ -0.26
RNF13-208ENST00000467996 ZNF577Q9BSK1 485 aa13.4□□□□□ -0.26
RNF13-208ENST00000467996 AGO4Q9HCK5 861 aaKnown RBP13.4□□□□□ -0.26
RNF13-208ENST00000467996 KCNH7Q9NS40 1196 aa13.4□□□□□ -0.26
RNF13-208ENST00000467996 FLRT1Q9NZU1 646 aa13.4□□□□□ -0.26
RNF13-208ENST00000467996 PCDHA7Q9UN72 937 aa13.4□□□□□ -0.26
RNF13-208ENST00000467996 SRPRBQ9Y5M8 271 aaKnown RBP13.4□□□□□ -0.26
RNF13-208ENST00000467996 VWA3AA6NCI4 1184 aa13.39□□□□□ -0.27
RNF13-208ENST00000467996 DDX11L8A8MPP1 907 aa13.39□□□□□ -0.27
RNF13-208ENST00000467996 MARCH6O60337 910 aa13.39□□□□□ -0.27
RNF13-208ENST00000467996 CUTAO60888 179 aa13.39□□□□□ -0.27
RNF13-208ENST00000467996 ICAM3P32942 547 aa13.39□□□□□ -0.27
RNF13-208ENST00000467996 TXKP42681 527 aa13.39□□□□□ -0.27
RNF13-208ENST00000467996 FLT3LGP49771 235 aa13.39□□□□□ -0.27
RNF13-208ENST00000467996 AXDND1Q5T1B0 1012 aaPredicted RBP13.39□□□□□ -0.27
RNF13-208ENST00000467996 OLFML2BQ68BL8 750 aa13.39□□□□□ -0.27
RNF13-208ENST00000467996 DTHD1Q6ZMT9 781 aa13.39□□□□□ -0.27
RNF13-208ENST00000467996 SLC5A5Q92911 643 aa13.39□□□□□ -0.27
RNF13-208ENST00000467996 FAM20AQ96MK3 541 aa13.39□□□□□ -0.27
RNF13-208ENST00000467996 CLIC6Q96NY7 704 aa13.39□□□□□ -0.27
RNF13-208ENST00000467996 TINF2Q9BSI4 451 aa13.39□□□□□ -0.27
RNF13-208ENST00000467996 LMBRD1Q9NUN5 540 aa13.39□□□□□ -0.27
RNF13-208ENST00000467996 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.39□□□□□ -0.27
RNF13-208ENST00000467996 SPATA31C2B4DYI2 1134 aa13.38□□□□□ -0.27
RNF13-208ENST00000467996 IPO5O00410 1097 aaKnown RBP13.38□□□□□ -0.27
RNF13-208ENST00000467996 GADD45BO75293 160 aaPredicted RBP13.38□□□□□ -0.27
RNF13-208ENST00000467996 SNAI1O95863 264 aaPredicted RBP13.38□□□□□ -0.27
RNF13-208ENST00000467996 GNRH1P01148 92 aa13.38□□□□□ -0.27
RNF13-208ENST00000467996 IGHA2P01877 340 aa13.38□□□□□ -0.27
RNF13-208ENST00000467996 XRCC5P13010 732 aaKnown RBP13.38□□□□□ -0.27
RNF13-208ENST00000467996 TECP42680 631 aa13.38□□□□□ -0.27
RNF13-208ENST00000467996 FXR2P51116 673 aaKnown RBP eCLIP13.38□□□□□ -0.27
RNF13-208ENST00000467996 ITGB3BPQ13352 177 aaPredicted RBP13.38□□□□□ -0.27
RNF13-208ENST00000467996 TMEM266Q2M3C6 531 aa13.38□□□□□ -0.27
RNF13-208ENST00000467996 TPRNQ4KMQ1 711 aa13.38□□□□□ -0.27
RNF13-208ENST00000467996 LRCH2Q5VUJ6 765 aa13.38□□□□□ -0.27
RNF13-208ENST00000467996 SEPT14Q6ZU15 432 aa13.38□□□□□ -0.27
RNF13-208ENST00000467996 CDHR1Q96JP9 859 aa13.38□□□□□ -0.27
RNF13-208ENST00000467996 KATNBL1Q9H079 304 aa13.38□□□□□ -0.27
RNF13-208ENST00000467996 CSRNP2Q9H175 543 aa13.38□□□□□ -0.27
RNF13-208ENST00000467996 TTC12Q9H892 705 aaPredicted RBP13.38□□□□□ -0.27
RNF13-208ENST00000467996 VTA1Q9NP79 307 aa13.38□□□□□ -0.27
RNF13-208ENST00000467996 PKD2L1Q9P0L9 805 aa13.38□□□□□ -0.27
RNF13-208ENST00000467996 SRRDQ9UH36 339 aa13.38□□□□□ -0.27
RNF13-208ENST00000467996 FRMPD3Q5JV73 1810 aa13.37□□□□□ -0.27
RNF13-208ENST00000467996 POTEMA6NI47 508 aa13.37□□□□□ -0.27
RNF13-208ENST00000467996 MAFGO15525 162 aa13.37□□□□□ -0.27
RNF13-208ENST00000467996 GAS7O60861 476 aa13.37□□□□□ -0.27
RNF13-208ENST00000467996 ATP9AO75110 1047 aa13.37□□□□□ -0.27
RNF13-208ENST00000467996 PSMD10O75832 226 aa13.37□□□□□ -0.27
RNF13-208ENST00000467996 KCNA2P16389 499 aa13.37□□□□□ -0.27
RNF13-208ENST00000467996 HOXD10P28358 340 aa13.37□□□□□ -0.27
RNF13-208ENST00000467996 LONP1P36776 959 aaKnown RBP13.37□□□□□ -0.27
RNF13-208ENST00000467996 UBE2HP62256 183 aa13.37□□□□□ -0.27
RNF13-208ENST00000467996 MKRN4PQ13434 485 aaPredicted RBP13.37□□□□□ -0.27
RNF13-208ENST00000467996 IRF5Q13568 498 aa13.37□□□□□ -0.27
RNF13-208ENST00000467996 NFKBIBQ15653 356 aa13.37□□□□□ -0.27
RNF13-208ENST00000467996 ADALQ6DHV7 355 aa13.37□□□□□ -0.27
RNF13-208ENST00000467996 SHC4Q6S5L8 630 aa13.37□□□□□ -0.27
RNF13-208ENST00000467996 IGSF22Q8N9C0 903 aa13.37□□□□□ -0.27
RNF13-208ENST00000467996 ZNF579Q8NAF0 562 aaKnown RBP13.37□□□□□ -0.27
RNF13-208ENST00000467996 TRIB2Q92519 343 aa13.37□□□□□ -0.27
RNF13-208ENST00000467996 RIT2Q99578 217 aa13.37□□□□□ -0.27
RNF13-208ENST00000467996 TEKT3Q9BXF9 490 aa13.37□□□□□ -0.27
RNF13-208ENST00000467996 VAV3Q9UKW4 847 aa13.37□□□□□ -0.27
RNF13-208ENST00000467996 PCDHA12Q9UN75 941 aa13.37□□□□□ -0.27
RNF13-208ENST00000467996 A0A1W2PQ27 194 aa13.36□□□□□ -0.27
RNF13-208ENST00000467996 A0A1W2PQ64 194 aa13.36□□□□□ -0.27
RNF13-208ENST00000467996 A0A1W2PQD8 194 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms