RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 FEZF2Q8TBJ5 459 aa5.6□□□□□ -1.51
TM9SF3-203ENST00000464654 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.6□□□□□ -1.51
TM9SF3-203ENST00000464654 ZBTB8AQ96BR9 441 aa5.6□□□□□ -1.51
TM9SF3-203ENST00000464654 NOX5Q96PH1 765 aa5.6□□□□□ -1.51
TM9SF3-203ENST00000464654 C11orf84Q9BUA3 381 aaPredicted RBP5.6□□□□□ -1.51
TM9SF3-203ENST00000464654 CCDC113Q9H0I3 377 aa5.6□□□□□ -1.51
TM9SF3-203ENST00000464654 SPATA6Q9NWH7 488 aaPredicted RBP5.6□□□□□ -1.51
TM9SF3-203ENST00000464654 CLDND1Q9NY35 253 aa5.6□□□□□ -1.51
TM9SF3-203ENST00000464654 HSPBP1Q9NZL4 362 aa5.6□□□□□ -1.51
TM9SF3-203ENST00000464654 TRAV20A0A0B4J274 112 aa5.59□□□□□ -1.51
TM9SF3-203ENST00000464654 B8ZZF3 427 aa5.59□□□□□ -1.51
TM9SF3-203ENST00000464654 U2SURPO15042 1029 aaKnown RBP5.59□□□□□ -1.51
TM9SF3-203ENST00000464654 PABPC1P11940 636 aaKnown RBP5.59□□□□□ -1.51
TM9SF3-203ENST00000464654 ATP2B1P20020 1258 aa5.59□□□□□ -1.51
TM9SF3-203ENST00000464654 RASGRF1Q13972 1273 aa5.59□□□□□ -1.51
TM9SF3-203ENST00000464654 STEAP3Q658P3 488 aa5.59□□□□□ -1.51
TM9SF3-203ENST00000464654 TTLL7Q6ZT98 887 aa5.59□□□□□ -1.51
TM9SF3-203ENST00000464654 OSBP2Q969R2 916 aa5.59□□□□□ -1.51
TM9SF3-203ENST00000464654 DDX11Q96FC9 970 aa5.59□□□□□ -1.51
TM9SF3-203ENST00000464654 CHAMP1Q96JM3 812 aa5.59□□□□□ -1.51
TM9SF3-203ENST00000464654 GORASP1Q9BQQ3 440 aa5.59□□□□□ -1.51
TM9SF3-203ENST00000464654 TCRBV5S2A0A599 114 aa5.58□□□□□ -1.52
TM9SF3-203ENST00000464654 PDPK1O15530 556 aa5.58□□□□□ -1.52
TM9SF3-203ENST00000464654 SMARCA5O60264 1052 aaPredicted RBP5.58□□□□□ -1.52
TM9SF3-203ENST00000464654 FOXD2O60548 495 aaPredicted RBP5.58□□□□□ -1.52
TM9SF3-203ENST00000464654 SYN1P17600 705 aa5.58□□□□□ -1.52
TM9SF3-203ENST00000464654 RPL13P26373 211 aaKnown RBP5.58□□□□□ -1.52
TM9SF3-203ENST00000464654 THBS2P35442 1172 aa5.58□□□□□ -1.52
TM9SF3-203ENST00000464654 SARSP49591 514 aaKnown RBP5.58□□□□□ -1.52
TM9SF3-203ENST00000464654 NKX3-2P78367 333 aa5.58□□□□□ -1.52
TM9SF3-203ENST00000464654 STYK1Q6J9G0 422 aa5.58□□□□□ -1.52
TM9SF3-203ENST00000464654 CD300LDQ6UXZ3 194 aa5.58□□□□□ -1.52
TM9SF3-203ENST00000464654 NSMFQ6X4W1 530 aa5.58□□□□□ -1.52
TM9SF3-203ENST00000464654 PHF20Q9BVI0 1012 aa5.58□□□□□ -1.52
TM9SF3-203ENST00000464654 HIRIP3Q9BW71 556 aaPredicted RBP5.58□□□□□ -1.52
TM9SF3-203ENST00000464654 TANGO6Q9C0B7 1094 aa5.58□□□□□ -1.52
TM9SF3-203ENST00000464654 PDGFDQ9GZP0 370 aaPredicted RBP5.58□□□□□ -1.52
TM9SF3-203ENST00000464654 SMOC1Q9H4F8 434 aa5.58□□□□□ -1.52
TM9SF3-203ENST00000464654 SIRPGQ9P1W8 387 aa5.58□□□□□ -1.52
TM9SF3-203ENST00000464654 PCDHB4Q9Y5E5 795 aa5.58□□□□□ -1.52
TM9SF3-203ENST00000464654 A0A1B0GTL3 188 aa5.57□□□□□ -1.52
TM9SF3-203ENST00000464654 KRIT1O00522 736 aa5.57□□□□□ -1.52
TM9SF3-203ENST00000464654 PRODHO43272 600 aa5.57□□□□□ -1.52
TM9SF3-203ENST00000464654 NOBOXO60393 691 aa5.57□□□□□ -1.52
TM9SF3-203ENST00000464654 ITGA1P56199 1179 aa5.57□□□□□ -1.52
TM9SF3-203ENST00000464654 KIZQ2M2Z5 673 aa5.57□□□□□ -1.52
TM9SF3-203ENST00000464654 CR1LQ2VPA4 569 aa5.57□□□□□ -1.52
TM9SF3-203ENST00000464654 LBX2Q6XYB7 198 aa5.57□□□□□ -1.52
TM9SF3-203ENST00000464654 USP53Q70EK8 1073 aa5.57□□□□□ -1.52
TM9SF3-203ENST00000464654 LRP10Q7Z4F1 713 aa5.57□□□□□ -1.52
TM9SF3-203ENST00000464654 TRIM48Q8IWZ4 208 aa5.57□□□□□ -1.52
TM9SF3-203ENST00000464654 ADGRG2Q8IZP9 1017 aa5.57□□□□□ -1.52
TM9SF3-203ENST00000464654 TTLL11Q8NHH1 800 aa5.57□□□□□ -1.52
TM9SF3-203ENST00000464654 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.57□□□□□ -1.525e-8■□□□□ 11.1
TM9SF3-203ENST00000464654 TOE1Q96GM8 510 aaKnown RBP5.57□□□□□ -1.52
TM9SF3-203ENST00000464654 SPATA25Q9BR10 227 aa5.57□□□□□ -1.52
TM9SF3-203ENST00000464654 YIPF4Q9BSR8 244 aa5.57□□□□□ -1.52
TM9SF3-203ENST00000464654 SPATA9Q9BWV2 254 aa5.57□□□□□ -1.52
TM9SF3-203ENST00000464654 SLC6A20Q9NP91 592 aa5.57□□□□□ -1.52
TM9SF3-203ENST00000464654 DTLQ9NZJ0 730 aa5.57□□□□□ -1.52
TM9SF3-203ENST00000464654 CNOT11Q9UKZ1 510 aaKnown RBP5.57□□□□□ -1.52
TM9SF3-203ENST00000464654 ADCY3O60266 1144 aa5.56□□□□□ -1.52
TM9SF3-203ENST00000464654 GJA9P57773 515 aa5.56□□□□□ -1.52
TM9SF3-203ENST00000464654 GPR85P60893 370 aa5.56□□□□□ -1.52
TM9SF3-203ENST00000464654 RBL2Q08999 1139 aa5.56□□□□□ -1.52
TM9SF3-203ENST00000464654 IFRD2Q12894 506 aaPredicted RBP5.56□□□□□ -1.52
TM9SF3-203ENST00000464654 NTRK3Q16288 839 aa5.56□□□□□ -1.52
TM9SF3-203ENST00000464654 LONRF2Q1L5Z9 754 aa5.56□□□□□ -1.52
TM9SF3-203ENST00000464654 FAM26FQ5R3K3 315 aa5.56□□□□□ -1.52
TM9SF3-203ENST00000464654 PRR31Q5SQ13 230 aa5.56□□□□□ -1.52
TM9SF3-203ENST00000464654 ZNF761Q86XN6 746 aaPredicted RBP5.56□□□□□ -1.52
TM9SF3-203ENST00000464654 SCUBE1Q8IWY4 988 aa5.56□□□□□ -1.52
TM9SF3-203ENST00000464654 IFNL3Q8IZI9 196 aa5.56□□□□□ -1.52
TM9SF3-203ENST00000464654 ZDHHC14Q8IZN3 488 aa5.56□□□□□ -1.52
TM9SF3-203ENST00000464654 FAM26EQ8N5C1 309 aa5.56□□□□□ -1.52
TM9SF3-203ENST00000464654 MYOTQ9UBF9 498 aa5.56□□□□□ -1.52
TM9SF3-203ENST00000464654 NUB1Q9Y5A7 615 aa5.56□□□□□ -1.52
TM9SF3-203ENST00000464654 MSCO60682 206 aa5.55□□□□□ -1.52
TM9SF3-203ENST00000464654 CYP7B1O75881 506 aa5.55□□□□□ -1.52
TM9SF3-203ENST00000464654 SMAD4Q13485 552 aaKnown RBP5.55□□□□□ -1.52
TM9SF3-203ENST00000464654 MTERF2Q49AM1 385 aa5.55□□□□□ -1.52
TM9SF3-203ENST00000464654 NT5DC1Q5TFE4 455 aa5.55□□□□□ -1.52
TM9SF3-203ENST00000464654 ARRDC4Q8NCT1 418 aa5.55□□□□□ -1.52
TM9SF3-203ENST00000464654 ADAMTS17Q8TE56 1095 aa5.55□□□□□ -1.52
TM9SF3-203ENST00000464654 WRNIP1Q96S55 665 aa5.55□□□□□ -1.52
TM9SF3-203ENST00000464654 LNPKQ9C0E8 428 aa5.55□□□□□ -1.52
TM9SF3-203ENST00000464654 USP40Q9NVE5 1235 aa5.55□□□□□ -1.52
TM9SF3-203ENST00000464654 ASH2LQ9UBL3 628 aa5.55□□□□□ -1.52
TM9SF3-203ENST00000464654 GRK2P25098 689 aa5.54□□□□□ -1.52
TM9SF3-203ENST00000464654 GRK3P35626 688 aa5.54□□□□□ -1.52
TM9SF3-203ENST00000464654 STAT5AP42229 794 aa5.54□□□□□ -1.52
TM9SF3-203ENST00000464654 SPIRE1Q08AE8 756 aa5.54□□□□□ -1.52
TM9SF3-203ENST00000464654 ADAM9Q13443 819 aa5.54□□□□□ -1.52
TM9SF3-203ENST00000464654 SERINC3Q13530 473 aa5.54□□□□□ -1.52
TM9SF3-203ENST00000464654 ZC3H12BQ5HYM0 836 aaKnown RBP5.54□□□□□ -1.52
TM9SF3-203ENST00000464654 HABP4Q5JVS0 413 aaKnown RBP5.54□□□□□ -1.52
TM9SF3-203ENST00000464654 SOGA3Q5TF21 947 aa5.54□□□□□ -1.52
TM9SF3-203ENST00000464654 TEPPQ6URK8 271 aa5.54□□□□□ -1.52
TM9SF3-203ENST00000464654 SPATC1Q76KD6 591 aa5.54□□□□□ -1.52
TM9SF3-203ENST00000464654 OTOP3Q7RTS5 596 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms