RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SP2Q02086 613 aa16.57■□□□□ 0.24
SQSTM1-205ENST00000464493 BRDTQ58F21 947 aaPredicted RBP16.57■□□□□ 0.24
SQSTM1-205ENST00000464493 DAGLBQ8NCG7 672 aa16.57■□□□□ 0.24
SQSTM1-205ENST00000464493 GJB4Q9NTQ9 266 aa16.57■□□□□ 0.24
SQSTM1-205ENST00000464493 UBIAD1Q9Y5Z9 338 aa16.57■□□□□ 0.24
SQSTM1-205ENST00000464493 MYH7BA7E2Y1 1941 aa16.57■□□□□ 0.24
SQSTM1-205ENST00000464493 A0A1W2PQ45 241 aaPredicted RBP16.56■□□□□ 0.24
SQSTM1-205ENST00000464493 A0A1W2PQY0 241 aa16.56■□□□□ 0.24
SQSTM1-205ENST00000464493 M0R2N6 131 aa16.56■□□□□ 0.24
SQSTM1-205ENST00000464493 ITGB5P18084 799 aa16.56■□□□□ 0.24
SQSTM1-205ENST00000464493 ZNF76P36508 570 aa16.56■□□□□ 0.24
SQSTM1-205ENST00000464493 HMGN5P82970 282 aaKnown RBP16.56■□□□□ 0.24
SQSTM1-205ENST00000464493 ARHGAP4P98171 946 aa16.56■□□□□ 0.24
SQSTM1-205ENST00000464493 ARHGAP1Q07960 439 aa16.56■□□□□ 0.24
SQSTM1-205ENST00000464493 LAMC2Q13753 1193 aa16.56■□□□□ 0.24
SQSTM1-205ENST00000464493 NPY5RQ15761 445 aa16.56■□□□□ 0.24
SQSTM1-205ENST00000464493 DHX37Q8IY37 1157 aaKnown RBP16.56■□□□□ 0.24
SQSTM1-205ENST00000464493 DPF3Q92784 378 aa16.56■□□□□ 0.24
SQSTM1-205ENST00000464493 EMID1Q96A84 441 aaPredicted RBP16.56■□□□□ 0.24
SQSTM1-205ENST00000464493 GPRASP2Q96D09 838 aa16.56■□□□□ 0.24
SQSTM1-205ENST00000464493 CDHR1Q96JP9 859 aa16.56■□□□□ 0.24
SQSTM1-205ENST00000464493 MXRA8Q9BRK3 442 aa16.56■□□□□ 0.24
SQSTM1-205ENST00000464493 JADE2Q9NQC1 790 aa16.56■□□□□ 0.24
SQSTM1-205ENST00000464493 A6NJR5 290 aa16.55■□□□□ 0.24
SQSTM1-205ENST00000464493 MAFGO15525 162 aa16.55■□□□□ 0.24
SQSTM1-205ENST00000464493 GGPS1O95749 300 aa16.55■□□□□ 0.24
SQSTM1-205ENST00000464493 CYP3A4P08684 503 aa16.55■□□□□ 0.24
SQSTM1-205ENST00000464493 UBA1P22314 1058 aaKnown RBP16.55■□□□□ 0.24
SQSTM1-205ENST00000464493 ATN1P54259 1190 aaPredicted RBP16.55■□□□□ 0.24
SQSTM1-205ENST00000464493 SEMA3FQ13275 785 aa16.55■□□□□ 0.24
SQSTM1-205ENST00000464493 MTMR1Q13613 665 aa16.55■□□□□ 0.24
SQSTM1-205ENST00000464493 TRIM29Q14134 588 aa16.55■□□□□ 0.24
SQSTM1-205ENST00000464493 NEDD9Q14511 834 aa16.55■□□□□ 0.24
SQSTM1-205ENST00000464493 CEP55Q53EZ4 464 aa16.55■□□□□ 0.24
SQSTM1-205ENST00000464493 CELF3Q5SZQ8 465 aaKnown RBP16.55■□□□□ 0.24
SQSTM1-205ENST00000464493 MYSM1Q5VVJ2 828 aa16.55■□□□□ 0.24
SQSTM1-205ENST00000464493 SLC39A5Q6ZMH5 540 aa16.55■□□□□ 0.24
SQSTM1-205ENST00000464493 CYP2W1Q8TAV3 490 aa16.55■□□□□ 0.24
SQSTM1-205ENST00000464493 AFG1LQ8WV93 481 aa16.55■□□□□ 0.24
SQSTM1-205ENST00000464493 CRYGNQ8WXF5 182 aa16.55■□□□□ 0.24
SQSTM1-205ENST00000464493 VTI1AQ96AJ9 217 aa16.55■□□□□ 0.24
SQSTM1-205ENST00000464493 GLT1D1Q96MS3 346 aa16.55■□□□□ 0.24
SQSTM1-205ENST00000464493 SENP7Q9BQF6 1050 aa16.55■□□□□ 0.24
SQSTM1-205ENST00000464493 CABYRO75952 493 aa16.54■□□□□ 0.24
SQSTM1-205ENST00000464493 LRRC26Q2I0M4 334 aa16.54■□□□□ 0.24
SQSTM1-205ENST00000464493 CXCL17Q6UXB2 119 aa16.54■□□□□ 0.24
SQSTM1-205ENST00000464493 FAM184AQ8NB25 1140 aa16.54■□□□□ 0.24
SQSTM1-205ENST00000464493 MLXIPQ9HAP2 919 aa16.54■□□□□ 0.24
SQSTM1-205ENST00000464493 STARD7Q9NQZ5 370 aa16.54■□□□□ 0.24
SQSTM1-205ENST00000464493 POLR3EQ9NVU0 708 aa16.54■□□□□ 0.24
SQSTM1-205ENST00000464493 ELP1O95163 1332 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 MEIS1O00470 390 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 EVI5O60447 810 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 SORBS3O60504 671 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 KPNA6O60684 536 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 ATP9AO75110 1047 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 MMP3P08254 477 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 MYL3P08590 195 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 KRT2P35908 639 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 USP11P51784 963 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 FOSBP53539 338 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 KRT40Q6A162 431 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 CYFIP1Q7L576 1253 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 NIPA1Q7RTP0 329 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 KRT25Q7Z3Z0 450 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 GIMAP8Q8ND71 665 aaPredicted RBP16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 PPTC7Q8NI37 304 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 TBCKQ8TEA7 893 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 SPATA33Q96N06 139 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 BCAS3Q9H6U6 928 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 BRMS1Q9HCU9 246 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 KCNH7Q9NS40 1196 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 PDE4DIPQ5VU43 2346 aa16.53■□□□□ 0.24
SQSTM1-205ENST00000464493 CCDC194A0A1B0GVG4 234 aa16.52■□□□□ 0.24
SQSTM1-205ENST00000464493 FAM86B1E9PN63 330 aa16.52■□□□□ 0.24
SQSTM1-205ENST00000464493 MMP1P03956 469 aa16.52■□□□□ 0.24
SQSTM1-205ENST00000464493 FAM86B2P0C5J1 330 aa16.52■□□□□ 0.24
SQSTM1-205ENST00000464493 ARP10275 920 aa16.52■□□□□ 0.24
SQSTM1-205ENST00000464493 KCNA2P16389 499 aa16.52■□□□□ 0.24
SQSTM1-205ENST00000464493 CIITAP33076 1130 aa16.52■□□□□ 0.24
SQSTM1-205ENST00000464493 PURAQ00577 322 aaKnown RBP16.52■□□□□ 0.24
SQSTM1-205ENST00000464493 NONOQ15233 471 aaKnown RBP eCLIP16.52■□□□□ 0.242e-8■■■■□ 21.7
SQSTM1-205ENST00000464493 DGKDQ16760 1214 aa16.52■□□□□ 0.24
SQSTM1-205ENST00000464493 HSDL1Q3SXM5 330 aa16.52■□□□□ 0.24
SQSTM1-205ENST00000464493 C1orf53Q5VUE5 145 aa16.52■□□□□ 0.24
SQSTM1-205ENST00000464493 METTL7BQ6UX53 244 aa16.52■□□□□ 0.24
SQSTM1-205ENST00000464493 OXER1Q8TDS5 423 aa16.52■□□□□ 0.24
SQSTM1-205ENST00000464493 C8orf76Q96K31 380 aa16.52■□□□□ 0.24
SQSTM1-205ENST00000464493 ALPK3Q96L96 1907 aa16.51■□□□□ 0.23
SQSTM1-205ENST00000464493 EDIL3O43854 480 aa16.51■□□□□ 0.23
SQSTM1-205ENST00000464493 PPFIA4O75335 1185 aa16.51■□□□□ 0.23
SQSTM1-205ENST00000464493 SNX17Q15036 470 aa16.51■□□□□ 0.23
SQSTM1-205ENST00000464493 PLA2G4DQ86XP0 818 aa16.51■□□□□ 0.23
SQSTM1-205ENST00000464493 MTG1Q9BT17 334 aaPredicted RBP16.51■□□□□ 0.23
SQSTM1-205ENST00000464493 AGO4Q9HCK5 861 aaKnown RBP16.51■□□□□ 0.23
SQSTM1-205ENST00000464493 PKD2L1Q9P0L9 805 aa16.51■□□□□ 0.23
SQSTM1-205ENST00000464493 DOCK5Q9H7D0 1870 aa16.5■□□□□ 0.23
SQSTM1-205ENST00000464493 IGLV3-22A0A075B6J6 115 aa16.5■□□□□ 0.23
SQSTM1-205ENST00000464493 A0A0U1RQG5 324 aaPredicted RBP16.5■□□□□ 0.23
SQSTM1-205ENST00000464493 BTBD18B2RXH4 712 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms