RNA–Protein interactions for RNA: ENST00000461405.1

PHF20-208, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-208ENST00000461405 MXRA8Q9BRK3 442 aa13.83□□□□□ -0.2
PHF20-208ENST00000461405 TMEM106CQ9BVX2 250 aa13.83□□□□□ -0.2
PHF20-208ENST00000461405 BCAS3Q9H6U6 928 aa13.83□□□□□ -0.2
PHF20-208ENST00000461405 FOXD4L1Q9NU39 408 aa13.83□□□□□ -0.2
PHF20-208ENST00000461405 DDX41Q9UJV9 622 aaKnown RBP13.83□□□□□ -0.2
PHF20-208ENST00000461405 MRVI1Q9Y6F6 885 aa13.83□□□□□ -0.2
PHF20-208ENST00000461405 SPATA31C2B4DYI2 1134 aa13.82□□□□□ -0.2
PHF20-208ENST00000461405 FIBPO43427 364 aa13.82□□□□□ -0.2
PHF20-208ENST00000461405 TDP2O95551 362 aa13.82□□□□□ -0.2
PHF20-208ENST00000461405 TXNP10599 105 aaKnown RBP13.82□□□□□ -0.2
PHF20-208ENST00000461405 CST5P28325 142 aaPredicted RBP13.82□□□□□ -0.2
PHF20-208ENST00000461405 CIITAP33076 1130 aa13.82□□□□□ -0.2
PHF20-208ENST00000461405 GJA9P57773 515 aa13.82□□□□□ -0.2
PHF20-208ENST00000461405 TRIM29Q14134 588 aa13.82□□□□□ -0.2
PHF20-208ENST00000461405 TTLL4Q14679 1199 aa13.82□□□□□ -0.2
PHF20-208ENST00000461405 NONOQ15233 471 aaKnown RBP eCLIP13.82□□□□□ -0.2
PHF20-208ENST00000461405 LRRC41Q15345 812 aa13.82□□□□□ -0.2
PHF20-208ENST00000461405 INF2Q27J81 1249 aa13.82□□□□□ -0.2
PHF20-208ENST00000461405 CEP55Q53EZ4 464 aa13.82□□□□□ -0.2
PHF20-208ENST00000461405 CCSAPQ6IQ19 270 aaPredicted RBP13.82□□□□□ -0.2
PHF20-208ENST00000461405 PIK3AP1Q6ZUJ8 805 aa13.82□□□□□ -0.2
PHF20-208ENST00000461405 KLHDC9Q8NEP7 349 aa13.82□□□□□ -0.2
PHF20-208ENST00000461405 JADE2Q9NQC1 790 aa13.82□□□□□ -0.2
PHF20-208ENST00000461405 TELO2Q9Y4R8 837 aa13.82□□□□□ -0.2
PHF20-208ENST00000461405 ALPK3Q96L96 1907 aa13.82□□□□□ -0.2
PHF20-208ENST00000461405 KIAA0100Q14667 2235 aaKnown RBP13.82□□□□□ -0.2
PHF20-208ENST00000461405 MEIS1O00470 390 aa13.81□□□□□ -0.2
PHF20-208ENST00000461405 NKRFO15226 690 aaKnown RBP eCLIP13.81□□□□□ -0.22e-8■■□□□ 13.1
PHF20-208ENST00000461405 ATP9AO75110 1047 aa13.81□□□□□ -0.2
PHF20-208ENST00000461405 ARP10275 920 aa13.81□□□□□ -0.2
PHF20-208ENST00000461405 KCNA2P16389 499 aa13.81□□□□□ -0.2
PHF20-208ENST00000461405 MTMR1Q13613 665 aa13.81□□□□□ -0.2
PHF20-208ENST00000461405 GNPTABQ3T906 1256 aa13.81□□□□□ -0.2
PHF20-208ENST00000461405 MBOAT7Q96N66 472 aa13.81□□□□□ -0.2
PHF20-208ENST00000461405 BRMS1Q9HCU9 246 aa13.81□□□□□ -0.2
PHF20-208ENST00000461405 KIF3AQ9Y496 699 aa13.81□□□□□ -0.2
PHF20-208ENST00000461405 CCDC194A0A1B0GVG4 234 aa13.8□□□□□ -0.2
PHF20-208ENST00000461405 SLC37A4O43826 429 aa13.8□□□□□ -0.2
PHF20-208ENST00000461405 GGPS1O95749 300 aa13.8□□□□□ -0.2
PHF20-208ENST00000461405 COL6A1P12109 1028 aa13.8□□□□□ -0.2
PHF20-208ENST00000461405 BEX3Q00994 111 aa13.8□□□□□ -0.2
PHF20-208ENST00000461405 ITGB3BPQ13352 177 aaPredicted RBP13.8□□□□□ -0.2
PHF20-208ENST00000461405 NIPA1Q7RTP0 329 aa13.8□□□□□ -0.2
PHF20-208ENST00000461405 NLRX1Q86UT6 975 aa13.8□□□□□ -0.2
PHF20-208ENST00000461405 ANKLE1Q8NAG6 615 aa13.8□□□□□ -0.2
PHF20-208ENST00000461405 OR6J1Q8NGC5 347 aa13.8□□□□□ -0.2
PHF20-208ENST00000461405 FOXP1Q9H334 677 aaPredicted RBP13.8□□□□□ -0.2
PHF20-208ENST00000461405 KCNH7Q9NS40 1196 aa13.8□□□□□ -0.2
PHF20-208ENST00000461405 PKD2L1Q9P0L9 805 aa13.8□□□□□ -0.2
PHF20-208ENST00000461405 Q9Y3F1 56 aa13.8□□□□□ -0.2
PHF20-208ENST00000461405 CYP3A7-CYP3A51PA0A087WV96 503 aa13.79□□□□□ -0.2
PHF20-208ENST00000461405 DNM1LO00429 736 aa13.79□□□□□ -0.2
PHF20-208ENST00000461405 DYNC1LI2O43237 492 aaPredicted RBP13.79□□□□□ -0.2
PHF20-208ENST00000461405 SORBS3O60504 671 aa13.79□□□□□ -0.2
PHF20-208ENST00000461405 FARP2O94887 1054 aaPredicted RBP13.79□□□□□ -0.2
PHF20-208ENST00000461405 GH1P01241 217 aa13.79□□□□□ -0.2
PHF20-208ENST00000461405 TFRCP02786 760 aaKnown RBP13.79□□□□□ -0.2
PHF20-208ENST00000461405 MMP3P08254 477 aa13.79□□□□□ -0.2
PHF20-208ENST00000461405 C6orf222P0C671 652 aaPredicted RBP13.79□□□□□ -0.2
PHF20-208ENST00000461405 TGFB3P10600 412 aa13.79□□□□□ -0.2
PHF20-208ENST00000461405 CYP3A7P24462 503 aa13.79□□□□□ -0.2
PHF20-208ENST00000461405 U2AF2P26368 475 aaKnown RBP eCLIP13.79□□□□□ -0.2
PHF20-208ENST00000461405 USP11P51784 963 aa13.79□□□□□ -0.2
PHF20-208ENST00000461405 CELF3Q5SZQ8 465 aaKnown RBP13.79□□□□□ -0.2
PHF20-208ENST00000461405 MYSM1Q5VVJ2 828 aa13.79□□□□□ -0.2
PHF20-208ENST00000461405 KCNV1Q6PIU1 500 aa13.79□□□□□ -0.2
PHF20-208ENST00000461405 MOXD1Q6UVY6 613 aa13.79□□□□□ -0.2
PHF20-208ENST00000461405 NEK8Q86SG6 692 aa13.79□□□□□ -0.2
PHF20-208ENST00000461405 PLA2G4DQ86XP0 818 aa13.79□□□□□ -0.2
PHF20-208ENST00000461405 EMID1Q96A84 441 aaPredicted RBP13.79□□□□□ -0.2
PHF20-208ENST00000461405 AGO4Q9HCK5 861 aaKnown RBP13.79□□□□□ -0.2
PHF20-208ENST00000461405 HOXD8P13378 290 aaPredicted RBP13.78□□□□□ -0.2
PHF20-208ENST00000461405 SETQ01105 290 aaPredicted RBP13.78□□□□□ -0.2
PHF20-208ENST00000461405 SAFBQ15424 915 aaKnown RBP eCLIP13.78□□□□□ -0.2
PHF20-208ENST00000461405 FSCN1Q16658 493 aaKnown RBP13.78□□□□□ -0.2
PHF20-208ENST00000461405 LETM2Q2VYF4 491 aa13.78□□□□□ -0.2
PHF20-208ENST00000461405 HSDL1Q3SXM5 330 aa13.78□□□□□ -0.2
PHF20-208ENST00000461405 Q4G0T1 1027 aa13.78□□□□□ -0.2
PHF20-208ENST00000461405 PRR16Q569H4 304 aa13.78□□□□□ -0.2
PHF20-208ENST00000461405 LARP1BQ659C4 914 aaKnown RBP13.78□□□□□ -0.2
PHF20-208ENST00000461405 NOSTRINQ8IVI9 506 aa13.78□□□□□ -0.2
PHF20-208ENST00000461405 AFG1LQ8WV93 481 aa13.78□□□□□ -0.2
PHF20-208ENST00000461405 SENP7Q9BQF6 1050 aa13.78□□□□□ -0.2
PHF20-208ENST00000461405 PHF24Q9UPV7 400 aa13.78□□□□□ -0.2
PHF20-208ENST00000461405 MYH15Q9Y2K3 1946 aa13.78□□□□□ -0.2
PHF20-208ENST00000461405 A6NJR5 290 aa13.77□□□□□ -0.21
PHF20-208ENST00000461405 MSH4O15457 936 aa13.77□□□□□ -0.21
PHF20-208ENST00000461405 DHX15O43143 795 aaKnown RBP13.77□□□□□ -0.21
PHF20-208ENST00000461405 CAPN15O75808 1086 aa13.77□□□□□ -0.21
PHF20-208ENST00000461405 CAPN2P17655 700 aa13.77□□□□□ -0.21
PHF20-208ENST00000461405 SYT1P21579 422 aa13.77□□□□□ -0.21
PHF20-208ENST00000461405 ZNF76P36508 570 aa13.77□□□□□ -0.21
PHF20-208ENST00000461405 PPP4R3AQ6IN85 833 aa13.77□□□□□ -0.21
PHF20-208ENST00000461405 METTL7BQ6UX53 244 aa13.77□□□□□ -0.21
PHF20-208ENST00000461405 CYFIP1Q7L576 1253 aa13.77□□□□□ -0.21
PHF20-208ENST00000461405 RNF180Q86T96 592 aa13.77□□□□□ -0.21
PHF20-208ENST00000461405 DHX37Q8IY37 1157 aaKnown RBP13.77□□□□□ -0.21
PHF20-208ENST00000461405 PPTC7Q8NI37 304 aa13.77□□□□□ -0.21
PHF20-208ENST00000461405 ETNPPLQ8TBG4 499 aa13.77□□□□□ -0.21
PHF20-208ENST00000461405 GJA10Q969M2 543 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms