RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 CCDC194A0A1B0GVG4 234 aa15.35■□□□□ 0.05
VPS52-212ENST00000445902 PPP1R12AO14974 1030 aaPredicted RBP15.35■□□□□ 0.05
VPS52-212ENST00000445902 ELF3P78545 371 aaPredicted RBP15.35■□□□□ 0.05
VPS52-212ENST00000445902 CCDC50Q8IVM0 306 aa15.35■□□□□ 0.05
VPS52-212ENST00000445902 ATP6V0A4Q9HBG4 840 aa15.35■□□□□ 0.05
VPS52-212ENST00000445902 DOCK2Q92608 1830 aa15.35■□□□□ 0.05
VPS52-212ENST00000445902 PEX19P40855 299 aa15.35■□□□□ 0.05
VPS52-212ENST00000445902 TNNC1P63316 161 aa15.35■□□□□ 0.05
VPS52-212ENST00000445902 HGSNATQ68CP4 663 aa15.35■□□□□ 0.05
VPS52-212ENST00000445902 PDXDC1Q6P996 788 aa15.35■□□□□ 0.05
VPS52-212ENST00000445902 NLRP10Q86W26 655 aa15.35■□□□□ 0.05
VPS52-212ENST00000445902 USP38Q8NB14 1042 aa15.35■□□□□ 0.05
VPS52-212ENST00000445902 TATDN2Q93075 761 aa15.35■□□□□ 0.05
VPS52-212ENST00000445902 DDX47Q9H0S4 455 aaKnown RBP15.35■□□□□ 0.05
VPS52-212ENST00000445902 FAM170AA1A519 330 aa15.34■□□□□ 0.05
VPS52-212ENST00000445902 SLC8A1P32418 973 aa15.34■□□□□ 0.05
VPS52-212ENST00000445902 XRCC4Q13426 336 aa15.34■□□□□ 0.05
VPS52-212ENST00000445902 PFKFB3Q16875 520 aaPredicted RBP15.34■□□□□ 0.05
VPS52-212ENST00000445902 TXNRD1Q16881 649 aa15.34■□□□□ 0.05
VPS52-212ENST00000445902 ASTE1Q2TB18 679 aaPredicted RBP15.34■□□□□ 0.05
VPS52-212ENST00000445902 KRT71Q3SY84 523 aa15.34■□□□□ 0.05
VPS52-212ENST00000445902 DYMQ7RTS9 669 aa15.34■□□□□ 0.05
VPS52-212ENST00000445902 CABP7Q86V35 215 aa15.34■□□□□ 0.05
VPS52-212ENST00000445902 DNAJC10Q8IXB1 793 aa15.34■□□□□ 0.05
VPS52-212ENST00000445902 NSMCE1Q8WV22 266 aa15.34■□□□□ 0.05
VPS52-212ENST00000445902 CCT6BQ92526 530 aa15.34■□□□□ 0.05
VPS52-212ENST00000445902 TBC1D5Q92609 795 aa15.34■□□□□ 0.05
VPS52-212ENST00000445902 CCDC47Q96A33 483 aaKnown RBP15.34■□□□□ 0.05
VPS52-212ENST00000445902 MYH3P11055 1940 aa15.34■□□□□ 0.05
VPS52-212ENST00000445902 MAGEB6P1A0A0J9YX57 407 aa15.34■□□□□ 0.05
VPS52-212ENST00000445902 RTN2O75298 545 aa15.34■□□□□ 0.05
VPS52-212ENST00000445902 FGFR2P21802 821 aa15.34■□□□□ 0.05
VPS52-212ENST00000445902 KIAA0753Q2KHM9 967 aa15.34■□□□□ 0.05
VPS52-212ENST00000445902 TSKSQ9UJT2 592 aa15.34■□□□□ 0.05
VPS52-212ENST00000445902 TNS3Q68CZ2 1445 aa15.33■□□□□ 0.05
VPS52-212ENST00000445902 MGRN1O60291 552 aa15.33■□□□□ 0.05
VPS52-212ENST00000445902 CEP104O60308 925 aa15.33■□□□□ 0.05
VPS52-212ENST00000445902 TBC1D1Q86TI0 1168 aaPredicted RBP15.33■□□□□ 0.05
VPS52-212ENST00000445902 FMNL3Q8IVF7 1028 aa15.33■□□□□ 0.05
VPS52-212ENST00000445902 MTA3Q9BTC8 594 aa15.33■□□□□ 0.05
VPS52-212ENST00000445902 TRIM31Q9BZY9 425 aa15.33■□□□□ 0.05
VPS52-212ENST00000445902 ISCUQ9H1K1 167 aa15.33■□□□□ 0.05
VPS52-212ENST00000445902 F8W031 263 aaPredicted RBP15.33■□□□□ 0.04
VPS52-212ENST00000445902 DAPK3O43293 454 aa15.33■□□□□ 0.04
VPS52-212ENST00000445902 TLR2O60603 784 aa15.33■□□□□ 0.04
VPS52-212ENST00000445902 LRRC41Q15345 812 aa15.33■□□□□ 0.04
VPS52-212ENST00000445902 FAM133BQ5BKY9 247 aaKnown RBP15.33■□□□□ 0.04
VPS52-212ENST00000445902 MEI1Q5TIA1 1274 aa15.33■□□□□ 0.04
VPS52-212ENST00000445902 GGT7Q9UJ14 662 aa15.33■□□□□ 0.04
VPS52-212ENST00000445902 GCKP35557 465 aa15.33■□□□□ 0.04
VPS52-212ENST00000445902 MAN2A1Q16706 1144 aa15.33■□□□□ 0.04
VPS52-212ENST00000445902 STAG2Q8N3U4 1231 aa15.33■□□□□ 0.04
VPS52-212ENST00000445902 RNF10Q8N5U6 811 aaKnown RBP15.33■□□□□ 0.04
VPS52-212ENST00000445902 GLIS3Q8NEA6 775 aa15.33■□□□□ 0.04
VPS52-212ENST00000445902 TAF4BQ92750 862 aa15.33■□□□□ 0.04
VPS52-212ENST00000445902 RSRC1Q96IZ7 334 aaKnown RBP15.33■□□□□ 0.04
VPS52-212ENST00000445902 DPH5Q9H2P9 285 aa15.33■□□□□ 0.04
VPS52-212ENST00000445902 RNF14Q9UBS8 474 aa15.33■□□□□ 0.04
VPS52-212ENST00000445902 ADAMTS1Q9UHI8 967 aa15.33■□□□□ 0.04
VPS52-212ENST00000445902 KCPQ6ZWJ8 1503 aa15.33■□□□□ 0.04
VPS52-212ENST00000445902 GRID2IPA4D2P6 1211 aa15.32■□□□□ 0.04
VPS52-212ENST00000445902 SMIM23A6NLE4 172 aa15.32■□□□□ 0.04
VPS52-212ENST00000445902 CTNND1O60716 968 aaKnown RBP15.32■□□□□ 0.04
VPS52-212ENST00000445902 CALM1P0DP23 149 aa15.32■□□□□ 0.04
VPS52-212ENST00000445902 CALM2P0DP24 149 aa15.32■□□□□ 0.04
VPS52-212ENST00000445902 CALM3P0DP25 149 aa15.32■□□□□ 0.04
VPS52-212ENST00000445902 DRD4P21917 467 aa15.32■□□□□ 0.04
VPS52-212ENST00000445902 POLR2FP61218 127 aaKnown RBP15.32■□□□□ 0.04
VPS52-212ENST00000445902 TRIM28Q13263 835 aaKnown RBP15.32■□□□□ 0.04
VPS52-212ENST00000445902 LRIG3Q6UXM1 1119 aa15.32■□□□□ 0.04
VPS52-212ENST00000445902 CUL5Q93034 780 aa15.32■□□□□ 0.04
VPS52-212ENST00000445902 A0A087X0T9 212 aa15.32■□□□□ 0.04
VPS52-212ENST00000445902 EIF4E1BA6NMX2 242 aaKnown RBP15.32■□□□□ 0.04
VPS52-212ENST00000445902 FAM228BP0C875 321 aa15.32■□□□□ 0.04
VPS52-212ENST00000445902 RAPGEF1Q13905 1077 aa15.32■□□□□ 0.04
VPS52-212ENST00000445902 NAB2Q15742 525 aa15.32■□□□□ 0.04
VPS52-212ENST00000445902 SLC9C1Q4G0N8 1177 aa15.32■□□□□ 0.04
VPS52-212ENST00000445902 RUFY4Q6ZNE9 571 aa15.32■□□□□ 0.04
VPS52-212ENST00000445902 SPDL1Q96EA4 605 aa15.32■□□□□ 0.04
VPS52-212ENST00000445902 AMACRQ9UHK6 382 aa15.32■□□□□ 0.04
VPS52-212ENST00000445902 PNMA2Q9UL42 364 aa15.32■□□□□ 0.04
VPS52-212ENST00000445902 FLT1P17948 1338 aa15.32■□□□□ 0.04
VPS52-212ENST00000445902 ALS2Q96Q42 1657 aa15.32■□□□□ 0.04
VPS52-212ENST00000445902 DUOX1Q9NRD9 1551 aa15.31■□□□□ 0.04
VPS52-212ENST00000445902 TRIM37O94972 964 aa15.31■□□□□ 0.04
VPS52-212ENST00000445902 TECP42680 631 aa15.31■□□□□ 0.04
VPS52-212ENST00000445902 CCDC84Q86UT8 332 aaPredicted RBP15.31■□□□□ 0.04
VPS52-212ENST00000445902 C1orf131Q8NDD1 294 aaKnown RBP15.31■□□□□ 0.04
VPS52-212ENST00000445902 TBC1D22AQ8WUA7 517 aa15.31■□□□□ 0.04
VPS52-212ENST00000445902 LRRC45Q96CN5 670 aa15.31■□□□□ 0.04
VPS52-212ENST00000445902 CELF4Q9BZC1 486 aaKnown RBP15.31■□□□□ 0.04
VPS52-212ENST00000445902 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.31■□□□□ 0.04
VPS52-212ENST00000445902 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.31■□□□□ 0.04
VPS52-212ENST00000445902 SRRM3A6NNA2 597 aaPredicted RBP15.31■□□□□ 0.04
VPS52-212ENST00000445902 USP17L12C9JPN9 530 aa15.31■□□□□ 0.04
VPS52-212ENST00000445902 USP17L21D6R901 530 aa15.31■□□□□ 0.04
VPS52-212ENST00000445902 SART1O43290 800 aaKnown RBP15.31■□□□□ 0.04
VPS52-212ENST00000445902 DDAH1O94760 285 aa15.31■□□□□ 0.04
VPS52-212ENST00000445902 ITGA4P13612 1032 aa15.31■□□□□ 0.04
VPS52-212ENST00000445902 IFFO1Q0D2I5 559 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms