RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 EPB41L2O43491 1005 aaKnown RBP10.09□□□□□ -0.79
USP6NL-203ENST00000443016 CYP2C9P11712 490 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 CCND2P30279 289 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 LIFRP42702 1097 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 FGD1P98174 961 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 PGM5Q15124 567 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 DGKDQ16760 1214 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 NFRKBQ6P4R8 1299 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 MICU3Q86XE3 530 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 CMTR1Q8N1G2 835 aaKnown RBP10.09□□□□□ -0.79
USP6NL-203ENST00000443016 SMARCC2Q8TAQ2 1214 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 NEK1Q96PY6 1258 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 NOC4LQ9BVI4 516 aaKnown RBP10.09□□□□□ -0.79
USP6NL-203ENST00000443016 SPZ1Q9BXG8 430 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 DDX41Q9UJV9 622 aaKnown RBP10.09□□□□□ -0.79
USP6NL-203ENST00000443016 STXBP5LQ9Y2K9 1186 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 SORBS3O60504 671 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 FGBP02675 491 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 MMP3P08254 477 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 GHRHRQ02643 423 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 ARHGAP1Q07960 439 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 LAMC2Q13753 1193 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 GNPTABQ3T906 1256 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 TMEM240Q5SV17 173 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 KCNV1Q6PIU1 500 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 OTOP2Q7RTS6 562 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 VSIG10LQ86VR7 867 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 RPUSD2Q8IZ73 545 aaKnown RBP10.09□□□□□ -0.79
USP6NL-203ENST00000443016 IL23AQ9NPF7 189 aa10.09□□□□□ -0.79
USP6NL-203ENST00000443016 PLEKHA8P1O95397 391 aa10.08□□□□□ -0.8
USP6NL-203ENST00000443016 C16orf59Q7L2K0 433 aa10.08□□□□□ -0.8
USP6NL-203ENST00000443016 SCLYQ96I15 445 aa10.08□□□□□ -0.8
USP6NL-203ENST00000443016 MLXIPQ9HAP2 919 aa10.08□□□□□ -0.8
USP6NL-203ENST00000443016 PRDM16Q9HAZ2 1276 aa10.08□□□□□ -0.8
USP6NL-203ENST00000443016 RIOK3O14730 519 aaKnown RBP10.08□□□□□ -0.8
USP6NL-203ENST00000443016 DNAJB2P25686 324 aa10.08□□□□□ -0.8
USP6NL-203ENST00000443016 SMARCA1P28370 1054 aa10.08□□□□□ -0.8
USP6NL-203ENST00000443016 SRBD1Q8N5C6 995 aaKnown RBP10.08□□□□□ -0.8
USP6NL-203ENST00000443016 C7orf31Q8N865 590 aa10.08□□□□□ -0.8
USP6NL-203ENST00000443016 FANCBQ8NB91 859 aa10.08□□□□□ -0.8
USP6NL-203ENST00000443016 IL31RAQ8NI17 732 aa10.08□□□□□ -0.8
USP6NL-203ENST00000443016 SPATA33Q96N06 139 aa10.08□□□□□ -0.8
USP6NL-203ENST00000443016 SEMA6BQ9H3T3 888 aa10.08□□□□□ -0.8
USP6NL-203ENST00000443016 BCCIPQ9P287 314 aaKnown RBP eCLIP10.08□□□□□ -0.8
USP6NL-203ENST00000443016 NAP1L2Q9ULW6 460 aaPredicted RBP10.08□□□□□ -0.8
USP6NL-203ENST00000443016 ZBBXA8MT70 800 aa10.07□□□□□ -0.8
USP6NL-203ENST00000443016 GGPS1O95749 300 aa10.07□□□□□ -0.8
USP6NL-203ENST00000443016 TGFB3P10600 412 aa10.07□□□□□ -0.8
USP6NL-203ENST00000443016 COL9A3Q14050 684 aaPredicted RBP10.07□□□□□ -0.8
USP6NL-203ENST00000443016 KRT32Q14532 448 aa10.07□□□□□ -0.8
USP6NL-203ENST00000443016 PTGISQ16647 500 aa10.07□□□□□ -0.8
USP6NL-203ENST00000443016 USP17L6PQ6QN14 398 aa10.07□□□□□ -0.8
USP6NL-203ENST00000443016 DEFB128Q7Z7B8 93 aa10.07□□□□□ -0.8
USP6NL-203ENST00000443016 PPTC7Q8NI37 304 aa10.07□□□□□ -0.8
USP6NL-203ENST00000443016 TCEANC2Q96MN5 208 aa10.07□□□□□ -0.8
USP6NL-203ENST00000443016 ALG1Q9BT22 464 aa10.07□□□□□ -0.8
USP6NL-203ENST00000443016 KATNAL1Q9BW62 490 aa10.07□□□□□ -0.8
USP6NL-203ENST00000443016 WNT8AQ9H1J5 351 aa10.07□□□□□ -0.8
USP6NL-203ENST00000443016 MYO9BQ13459 2157 aa10.07□□□□□ -0.8
USP6NL-203ENST00000443016 hCG_1642624A0A1W2PR95 340 aa10.07□□□□□ -0.8
USP6NL-203ENST00000443016 NOP56O00567 594 aaKnown RBP10.07□□□□□ -0.8
USP6NL-203ENST00000443016 RGS20O76081 388 aa10.07□□□□□ -0.8
USP6NL-203ENST00000443016 PTPN11Q06124 597 aaPredicted RBP10.07□□□□□ -0.8
USP6NL-203ENST00000443016 BFSP2Q13515 415 aa10.07□□□□□ -0.8
USP6NL-203ENST00000443016 MCM6Q14566 821 aa10.07□□□□□ -0.8
USP6NL-203ENST00000443016 DHX32Q7L7V1 743 aaKnown RBP10.07□□□□□ -0.8
USP6NL-203ENST00000443016 EMID1Q96A84 441 aaPredicted RBP10.07□□□□□ -0.8
USP6NL-203ENST00000443016 CCDC97Q96F63 343 aaPredicted RBP10.07□□□□□ -0.8
USP6NL-203ENST00000443016 GUCD1Q96NT3 240 aa10.07□□□□□ -0.8
USP6NL-203ENST00000443016 PSTPIP2Q9H939 334 aa10.07□□□□□ -0.8
USP6NL-203ENST00000443016 RTEL1Q9NZ71 1219 aa10.07□□□□□ -0.8
USP6NL-203ENST00000443016 PPFIA4O75335 1185 aa10.06□□□□□ -0.8
USP6NL-203ENST00000443016 ZNF286BP0CG31 522 aa10.06□□□□□ -0.8
USP6NL-203ENST00000443016 UBA1P22314 1058 aaKnown RBP10.06□□□□□ -0.8
USP6NL-203ENST00000443016 KIAA0753Q2KHM9 967 aa10.06□□□□□ -0.8
USP6NL-203ENST00000443016 HSDL1Q3SXM5 330 aa10.06□□□□□ -0.8
USP6NL-203ENST00000443016 CELF3Q5SZQ8 465 aaKnown RBP10.06□□□□□ -0.8
USP6NL-203ENST00000443016 MYSM1Q5VVJ2 828 aa10.06□□□□□ -0.8
USP6NL-203ENST00000443016 HEATR3Q7Z4Q2 680 aa10.06□□□□□ -0.8
USP6NL-203ENST00000443016 SGMS1Q86VZ5 419 aa10.06□□□□□ -0.8
USP6NL-203ENST00000443016 CDX2Q99626 313 aaPredicted RBP10.06□□□□□ -0.8
USP6NL-203ENST00000443016 FTOQ9C0B1 505 aaKnown RBP eCLIP10.06□□□□□ -0.8
USP6NL-203ENST00000443016 CXXC1Q9P0U4 656 aaPredicted RBP10.06□□□□□ -0.8
USP6NL-203ENST00000443016 CHD9Q3L8U1 2897 aa10.06□□□□□ -0.8
USP6NL-203ENST00000443016 GRXCR1A8MXD5 290 aa10.06□□□□□ -0.8
USP6NL-203ENST00000443016 PITPNM1O00562 1244 aa10.06□□□□□ -0.8
USP6NL-203ENST00000443016 STAM2O75886 525 aa10.06□□□□□ -0.8
USP6NL-203ENST00000443016 TMTC3Q6ZXV5 915 aa10.06□□□□□ -0.8
USP6NL-203ENST00000443016 RASEFQ8IZ41 740 aa10.06□□□□□ -0.8
USP6NL-203ENST00000443016 CCDC155Q8N6L0 562 aa10.06□□□□□ -0.8
USP6NL-203ENST00000443016 HERVK_113Q902F9 699 aa10.06□□□□□ -0.8
USP6NL-203ENST00000443016 TIFAQ96CG3 184 aa10.06□□□□□ -0.8
USP6NL-203ENST00000443016 TTYH1Q9H313 450 aaPredicted RBP10.06□□□□□ -0.8
USP6NL-203ENST00000443016 TMEM265A0A087WTH1 108 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 SPDYE3A6NKU9 549 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 ZBTB43O43298 467 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 PFKMP08237 780 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 SP2Q02086 613 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 MFSD10Q14728 455 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 ADCK5Q3MIX3 580 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms