RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 HSCBQ8IWL3 235 aa28.66■■■□□ 2.18
CPNE1-212ENST00000430570 DIS3L2Q8IYB7 885 aaKnown RBP28.66■■■□□ 2.18
CPNE1-212ENST00000430570 ANKLE1Q8NAG6 615 aa28.66■■■□□ 2.18
CPNE1-212ENST00000430570 OR6J1Q8NGC5 347 aa28.66■■■□□ 2.18
CPNE1-212ENST00000430570 AP5M1Q9H0R1 490 aa28.66■■■□□ 2.18
CPNE1-212ENST00000430570 FAM86B1E9PN63 330 aa28.65■■■□□ 2.18
CPNE1-212ENST00000430570 FIBPO43427 364 aa28.65■■■□□ 2.18
CPNE1-212ENST00000430570 SORBS3O60504 671 aa28.65■■■□□ 2.18
CPNE1-212ENST00000430570 FARP2O94887 1054 aaPredicted RBP28.65■■■□□ 2.18
CPNE1-212ENST00000430570 FAM86B2P0C5J1 330 aa28.65■■■□□ 2.18
CPNE1-212ENST00000430570 NKX3-2P78367 333 aa28.65■■■□□ 2.18
CPNE1-212ENST00000430570 CCSAPQ6IQ19 270 aaPredicted RBP28.65■■■□□ 2.18
CPNE1-212ENST00000430570 KCNV1Q6PIU1 500 aa28.65■■■□□ 2.18
CPNE1-212ENST00000430570 KRT25Q7Z3Z0 450 aa28.65■■■□□ 2.18
CPNE1-212ENST00000430570 GPRASP2Q96D09 838 aa28.65■■■□□ 2.18
CPNE1-212ENST00000430570 PAWRQ96IZ0 340 aaKnown RBP28.65■■■□□ 2.18
CPNE1-212ENST00000430570 FOXD4L1Q9NU39 408 aa28.65■■■□□ 2.18
CPNE1-212ENST00000430570 FAM205CA6NFA0 338 aa28.64■■■□□ 2.17
CPNE1-212ENST00000430570 DNM1LO00429 736 aa28.64■■■□□ 2.17
CPNE1-212ENST00000430570 ARP10275 920 aa28.64■■■□□ 2.17
CPNE1-212ENST00000430570 TGFB3P10600 412 aa28.64■■■□□ 2.17
CPNE1-212ENST00000430570 UBA1P22314 1058 aaKnown RBP28.64■■■□□ 2.17
CPNE1-212ENST00000430570 ZNF76P36508 570 aa28.64■■■□□ 2.17
CPNE1-212ENST00000430570 ARHGAP1Q07960 439 aa28.64■■■□□ 2.17
CPNE1-212ENST00000430570 NONOQ15233 471 aaKnown RBP eCLIP28.64■■■□□ 2.17
CPNE1-212ENST00000430570 INF2Q27J81 1249 aa28.64■■■□□ 2.17
CPNE1-212ENST00000430570 CEP55Q53EZ4 464 aa28.64■■■□□ 2.17
CPNE1-212ENST00000430570 PIK3AP1Q6ZUJ8 805 aa28.64■■■□□ 2.17
CPNE1-212ENST00000430570 RNF180Q86T96 592 aa28.64■■■□□ 2.17
CPNE1-212ENST00000430570 SPC25Q9HBM1 224 aa28.64■■■□□ 2.17
CPNE1-212ENST00000430570 BRMS1Q9HCU9 246 aa28.64■■■□□ 2.17
CPNE1-212ENST00000430570 CCDC194A0A1B0GVG4 234 aa28.63■■■□□ 2.17
CPNE1-212ENST00000430570 MEIS1O00470 390 aa28.63■■■□□ 2.17
CPNE1-212ENST00000430570 ATP9AO75110 1047 aa28.63■■■□□ 2.17
CPNE1-212ENST00000430570 GH1P01241 217 aa28.63■■■□□ 2.17
CPNE1-212ENST00000430570 IGLV3-22A0A075B6J6 115 aa28.62■■■□□ 2.17
CPNE1-212ENST00000430570 CST5P28325 142 aaPredicted RBP28.62■■■□□ 2.17
CPNE1-212ENST00000430570 CIITAP33076 1130 aa28.62■■■□□ 2.17
CPNE1-212ENST00000430570 USP11P51784 963 aa28.62■■■□□ 2.17
CPNE1-212ENST00000430570 MTMR1Q13613 665 aa28.62■■■□□ 2.17
CPNE1-212ENST00000430570 KCNA10Q16322 511 aa28.62■■■□□ 2.17
CPNE1-212ENST00000430570 GNASQ5JWF2 1037 aa28.62■■■□□ 2.17
CPNE1-212ENST00000430570 KCNH7Q9NS40 1196 aa28.62■■■□□ 2.17
CPNE1-212ENST00000430570 PKD2L1Q9P0L9 805 aa28.62■■■□□ 2.17
CPNE1-212ENST00000430570 GGPS1O95749 300 aa28.61■■■□□ 2.17
CPNE1-212ENST00000430570 FSCN1Q16658 493 aaKnown RBP28.61■■■□□ 2.17
CPNE1-212ENST00000430570 CELF3Q5SZQ8 465 aaKnown RBP28.61■■■□□ 2.17
CPNE1-212ENST00000430570 MYSM1Q5VVJ2 828 aa28.61■■■□□ 2.17
CPNE1-212ENST00000430570 PLA2G4DQ86XP0 818 aa28.61■■■□□ 2.17
CPNE1-212ENST00000430570 DHX37Q8IY37 1157 aaKnown RBP28.61■■■□□ 2.17
CPNE1-212ENST00000430570 INTS4Q96HW7 963 aaKnown RBP28.61■■■□□ 2.17
CPNE1-212ENST00000430570 KIF3AQ9Y496 699 aa28.61■■■□□ 2.17
CPNE1-212ENST00000430570 KBTBD13C9JR72 458 aa28.6■■■□□ 2.17
CPNE1-212ENST00000430570 COL6A1P12109 1028 aa28.6■■■□□ 2.17
CPNE1-212ENST00000430570 KCNA2P16389 499 aa28.6■■■□□ 2.17
CPNE1-212ENST00000430570 SAFBQ15424 915 aaKnown RBP eCLIP28.6■■■□□ 2.171e-17■■■■□ 20.2
CPNE1-212ENST00000430570 AFG1LQ8WV93 481 aa28.6■■■□□ 2.17
CPNE1-212ENST00000430570 TELO2Q9Y4R8 837 aa28.6■■■□□ 2.17
CPNE1-212ENST00000430570 MAFGO15525 162 aa28.59■■■□□ 2.17
CPNE1-212ENST00000430570 RGS19P49795 217 aa28.59■■■□□ 2.17
CPNE1-212ENST00000430570 NIPA1Q7RTP0 329 aa28.59■■■□□ 2.17
CPNE1-212ENST00000430570 NECAB2Q7Z6G3 386 aa28.59■■■□□ 2.17
CPNE1-212ENST00000430570 FERMT2Q96AC1 680 aa28.59■■■□□ 2.17
CPNE1-212ENST00000430570 CDHR1Q96JP9 859 aa28.59■■■□□ 2.17
CPNE1-212ENST00000430570 UIMC1Q96RL1 719 aa28.59■■■□□ 2.17
CPNE1-212ENST00000430570 SENP7Q9BQF6 1050 aa28.59■■■□□ 2.17
CPNE1-212ENST00000430570 TSEN34Q9BSV6 310 aaKnown RBP28.59■■■□□ 2.17
CPNE1-212ENST00000430570 C11orf49Q9H6J7 331 aa28.59■■■□□ 2.17
CPNE1-212ENST00000430570 AGO4Q9HCK5 861 aaKnown RBP28.59■■■□□ 2.17
CPNE1-212ENST00000430570 PHF24Q9UPV7 400 aa28.59■■■□□ 2.17
CPNE1-212ENST00000430570 DOCK5Q9H7D0 1870 aa28.59■■■□□ 2.17
CPNE1-212ENST00000430570 KIF28PB7ZC32 967 aa28.58■■■□□ 2.17
CPNE1-212ENST00000430570 TDP2O95551 362 aa28.58■■■□□ 2.17
CPNE1-212ENST00000430570 ASGR1P07306 291 aa28.58■■■□□ 2.17
CPNE1-212ENST00000430570 LAMC2Q13753 1193 aa28.58■■■□□ 2.17
CPNE1-212ENST00000430570 NEDD9Q14511 834 aa28.58■■■□□ 2.17
CPNE1-212ENST00000430570 PRR16Q569H4 304 aa28.58■■■□□ 2.17
CPNE1-212ENST00000430570 CYFIP1Q7L576 1253 aa28.58■■■□□ 2.17
CPNE1-212ENST00000430570 EMID1Q96A84 441 aaPredicted RBP28.58■■■□□ 2.17
CPNE1-212ENST00000430570 LENG9Q96B70 501 aa28.58■■■□□ 2.17
CPNE1-212ENST00000430570 SENP6Q9GZR1 1112 aaPredicted RBP28.58■■■□□ 2.17
CPNE1-212ENST00000430570 MLXIPQ9HAP2 919 aa28.58■■■□□ 2.17
CPNE1-212ENST00000430570 A6NJR5 290 aa28.57■■■□□ 2.16
CPNE1-212ENST00000430570 ACLYP53396 1101 aa28.57■■■□□ 2.16
CPNE1-212ENST00000430570 LETM2Q2VYF4 491 aa28.57■■■□□ 2.16
CPNE1-212ENST00000430570 LARP1BQ659C4 914 aaKnown RBP28.57■■■□□ 2.16
CPNE1-212ENST00000430570 NEK8Q86SG6 692 aa28.57■■■□□ 2.16
CPNE1-212ENST00000430570 PCSK9Q8NBP7 692 aaKnown RBP28.57■■■□□ 2.16
CPNE1-212ENST00000430570 FOXP1Q9H334 677 aaPredicted RBP28.57■■■□□ 2.16
CPNE1-212ENST00000430570 CYP3A7-CYP3A51PA0A087WV96 503 aa28.56■■■□□ 2.16
CPNE1-212ENST00000430570 CYP3A7P24462 503 aa28.56■■■□□ 2.16
CPNE1-212ENST00000430570 HSDL1Q3SXM5 330 aa28.56■■■□□ 2.16
CPNE1-212ENST00000430570 MOXD2PA6NHM9 499 aa28.55■■■□□ 2.16
CPNE1-212ENST00000430570 MMP3P08254 477 aa28.55■■■□□ 2.16
CPNE1-212ENST00000430570 CPT1AP50416 773 aa28.55■■■□□ 2.16
CPNE1-212ENST00000430570 ITGB3BPQ13352 177 aaPredicted RBP28.55■■■□□ 2.16
CPNE1-212ENST00000430570 IFFO2Q5TF58 517 aa28.55■■■□□ 2.16
CPNE1-212ENST00000430570 METTL7BQ6UX53 244 aa28.55■■■□□ 2.16
CPNE1-212ENST00000430570 CXCL17Q6UXB2 119 aa28.55■■■□□ 2.16
CPNE1-212ENST00000430570 SPATA33Q96N06 139 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms