RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 DLX3O60479 287 aa7.65□□□□□ -1.18
HMGB3P5-201ENST00000428894 FOXD2O60548 495 aaPredicted RBP7.65□□□□□ -1.18
HMGB3P5-201ENST00000428894 STK10O94804 968 aaKnown RBP7.65□□□□□ -1.18
HMGB3P5-201ENST00000428894 SMAD4Q13485 552 aaKnown RBP7.65□□□□□ -1.18
HMGB3P5-201ENST00000428894 CARFQ8N187 725 aa7.65□□□□□ -1.18
HMGB3P5-201ENST00000428894 SYT3Q9BQG1 590 aa7.65□□□□□ -1.18
HMGB3P5-201ENST00000428894 GORASP1Q9BQQ3 440 aa7.65□□□□□ -1.18
HMGB3P5-201ENST00000428894 TRIM55Q9BYV6 548 aa7.65□□□□□ -1.18
HMGB3P5-201ENST00000428894 PCDH18Q9HCL0 1135 aa7.65□□□□□ -1.18
HMGB3P5-201ENST00000428894 SPATA6Q9NWH7 488 aaPredicted RBP7.65□□□□□ -1.18
HMGB3P5-201ENST00000428894 NPFFR2Q9Y5X5 522 aa7.65□□□□□ -1.18
HMGB3P5-201ENST00000428894 CFTRP13569 1480 aa7.64□□□□□ -1.19
HMGB3P5-201ENST00000428894 SMARCA5O60264 1052 aaPredicted RBP7.64□□□□□ -1.19
HMGB3P5-201ENST00000428894 TTLL7Q6ZT98 887 aa7.64□□□□□ -1.19
HMGB3P5-201ENST00000428894 USP53Q70EK8 1073 aa7.64□□□□□ -1.19
HMGB3P5-201ENST00000428894 ZC3H18Q86VM9 953 aaKnown RBP7.64□□□□□ -1.19
HMGB3P5-201ENST00000428894 LINC00482Q8N8I6 264 aa7.64□□□□□ -1.19
HMGB3P5-201ENST00000428894 AARSD1Q9BTE6 412 aaKnown RBP7.64□□□□□ -1.19
HMGB3P5-201ENST00000428894 ADAM7Q9H2U9 754 aa7.64□□□□□ -1.19
HMGB3P5-201ENST00000428894 HGSO14964 777 aaPredicted RBP7.63□□□□□ -1.19
HMGB3P5-201ENST00000428894 PRODHO43272 600 aa7.63□□□□□ -1.19
HMGB3P5-201ENST00000428894 SYN1P17600 705 aa7.63□□□□□ -1.19
HMGB3P5-201ENST00000428894 STAT5AP42229 794 aa7.63□□□□□ -1.19
HMGB3P5-201ENST00000428894 SARSP49591 514 aaKnown RBP7.63□□□□□ -1.19
HMGB3P5-201ENST00000428894 CHRNA2Q15822 529 aa7.63□□□□□ -1.19
HMGB3P5-201ENST00000428894 NT5DC1Q5TFE4 455 aa7.63□□□□□ -1.19
HMGB3P5-201ENST00000428894 FRMD5Q7Z6J6 570 aa7.63□□□□□ -1.19
HMGB3P5-201ENST00000428894 FAM126BQ8IXS8 530 aa7.63□□□□□ -1.19
HMGB3P5-201ENST00000428894 CKAP2LQ8IYA6 745 aa7.63□□□□□ -1.19
HMGB3P5-201ENST00000428894 ST13P5Q8NFI4 369 aaPredicted RBP7.63□□□□□ -1.19
HMGB3P5-201ENST00000428894 YIPF4Q9BSR8 244 aa7.63□□□□□ -1.19
HMGB3P5-201ENST00000428894 C11orf84Q9BUA3 381 aaPredicted RBP7.63□□□□□ -1.19
HMGB3P5-201ENST00000428894 GPR27Q9NS67 375 aa7.63□□□□□ -1.19
HMGB3P5-201ENST00000428894 USP40Q9NVE5 1235 aa7.63□□□□□ -1.19
HMGB3P5-201ENST00000428894 NTMQ9P121 344 aa7.63□□□□□ -1.19
HMGB3P5-201ENST00000428894 ZNF652Q9Y2D9 606 aa7.63□□□□□ -1.19
HMGB3P5-201ENST00000428894 STEAP3Q658P3 488 aa7.62□□□□□ -1.19
HMGB3P5-201ENST00000428894 STK32CQ86UX6 486 aa7.62□□□□□ -1.19
HMGB3P5-201ENST00000428894 CXorf38Q8TB03 319 aa7.62□□□□□ -1.19
HMGB3P5-201ENST00000428894 TEPSINQ96N21 525 aa7.62□□□□□ -1.19
HMGB3P5-201ENST00000428894 PHF20Q9BVI0 1012 aa7.62□□□□□ -1.19
HMGB3P5-201ENST00000428894 EPB41L1Q9H4G0 881 aa7.62□□□□□ -1.19
HMGB3P5-201ENST00000428894 ARHGEF4Q9NR80 690 aa7.62□□□□□ -1.19
HMGB3P5-201ENST00000428894 PPP1R1BQ9UD71 204 aaPredicted RBP7.62□□□□□ -1.19
HMGB3P5-201ENST00000428894 WIZO95785 1651 aa7.61□□□□□ -1.19
HMGB3P5-201ENST00000428894 U2SURPO15042 1029 aaKnown RBP7.61□□□□□ -1.19
HMGB3P5-201ENST00000428894 MSCO60682 206 aa7.61□□□□□ -1.19
HMGB3P5-201ENST00000428894 TADA3O75528 432 aa7.61□□□□□ -1.19
HMGB3P5-201ENST00000428894 DGKIO75912 1065 aa7.61□□□□□ -1.19
HMGB3P5-201ENST00000428894 FGFR1P11362 822 aa7.61□□□□□ -1.19
HMGB3P5-201ENST00000428894 BUD31P41223 144 aaPredicted RBP7.61□□□□□ -1.19
HMGB3P5-201ENST00000428894 NSMFQ6X4W1 530 aa7.61□□□□□ -1.19
HMGB3P5-201ENST00000428894 KYQ8NBH2 561 aa7.61□□□□□ -1.19
HMGB3P5-201ENST00000428894 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.61□□□□□ -1.19
HMGB3P5-201ENST00000428894 KRTAP4-9Q9BYQ8 210 aa7.61□□□□□ -1.19
HMGB3P5-201ENST00000428894 NGRNQ9NPE2 291 aaKnown RBP7.61□□□□□ -1.19
HMGB3P5-201ENST00000428894 PCDHB4Q9Y5E5 795 aa7.61□□□□□ -1.19
HMGB3P5-201ENST00000428894 URB2Q14146 1524 aaKnown RBP7.61□□□□□ -1.19
HMGB3P5-201ENST00000428894 PABPC1P11940 636 aaKnown RBP7.6□□□□□ -1.19
HMGB3P5-201ENST00000428894 ATP2B1P20020 1258 aa7.6□□□□□ -1.19
HMGB3P5-201ENST00000428894 NKX3-2P78367 333 aa7.6□□□□□ -1.19
HMGB3P5-201ENST00000428894 CR1LQ2VPA4 569 aa7.6□□□□□ -1.19
HMGB3P5-201ENST00000428894 EMC4Q5J8M3 183 aa7.6□□□□□ -1.19
HMGB3P5-201ENST00000428894 RSPO2Q6UXX9 243 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P5-201ENST00000428894 LRRC47Q8N1G4 583 aaKnown RBP7.6□□□□□ -1.19
HMGB3P5-201ENST00000428894 ARRDC4Q8NCT1 418 aa7.6□□□□□ -1.19
HMGB3P5-201ENST00000428894 DCAF4Q8WV16 495 aa7.6□□□□□ -1.19
HMGB3P5-201ENST00000428894 OSBP2Q969R2 916 aa7.6□□□□□ -1.19
HMGB3P5-201ENST00000428894 JAM3Q9BX67 310 aa7.6□□□□□ -1.19
HMGB3P5-201ENST00000428894 TANGO6Q9C0B7 1094 aa7.6□□□□□ -1.19
HMGB3P5-201ENST00000428894 CDIP1Q9H305 208 aa7.6□□□□□ -1.19
HMGB3P5-201ENST00000428894 PPARGC1AQ9UBK2 798 aaKnown RBP7.6□□□□□ -1.19
HMGB3P5-201ENST00000428894 IFT140Q96RY7 1462 aa7.6□□□□□ -1.19
HMGB3P5-201ENST00000428894 TRAV20A0A0B4J274 112 aa7.59□□□□□ -1.19
HMGB3P5-201ENST00000428894 TCRBV5S2A0A599 114 aa7.59□□□□□ -1.19
HMGB3P5-201ENST00000428894 THBS2P35442 1172 aa7.59□□□□□ -1.19
HMGB3P5-201ENST00000428894 ITGA1P56199 1179 aa7.59□□□□□ -1.19
HMGB3P5-201ENST00000428894 KCNT2Q6UVM3 1135 aa7.59□□□□□ -1.19
HMGB3P5-201ENST00000428894 TTLL6Q8N841 843 aa7.59□□□□□ -1.19
HMGB3P5-201ENST00000428894 NOBOXO60393 691 aa7.58□□□□□ -1.2
HMGB3P5-201ENST00000428894 GJA9P57773 515 aa7.58□□□□□ -1.2
HMGB3P5-201ENST00000428894 IFRD2Q12894 506 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P5-201ENST00000428894 NTRK3Q16288 839 aa7.58□□□□□ -1.2
HMGB3P5-201ENST00000428894 YOD1Q5VVQ6 348 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P5-201ENST00000428894 ERICH6BQ5W0A0 696 aa7.58□□□□□ -1.2
HMGB3P5-201ENST00000428894 ZNF761Q86XN6 746 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P5-201ENST00000428894 DDX1Q92499 740 aaKnown RBP7.58□□□□□ -1.2
HMGB3P5-201ENST00000428894 TOE1Q96GM8 510 aaKnown RBP7.58□□□□□ -1.2
HMGB3P5-201ENST00000428894 SMOC1Q9H4F8 434 aa7.58□□□□□ -1.2
HMGB3P5-201ENST00000428894 DTLQ9NZJ0 730 aa7.58□□□□□ -1.2
HMGB3P5-201ENST00000428894 BLACEA4D250 179 aa7.57□□□□□ -1.2
HMGB3P5-201ENST00000428894 KRIT1O00522 736 aa7.57□□□□□ -1.2
HMGB3P5-201ENST00000428894 PRICKLE3O43900 615 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P5-201ENST00000428894 RPL13P26373 211 aaKnown RBP7.57□□□□□ -1.2
HMGB3P5-201ENST00000428894 RTP5Q14D33 572 aa7.57□□□□□ -1.2
HMGB3P5-201ENST00000428894 UBXN11Q5T124 520 aa7.57□□□□□ -1.2
HMGB3P5-201ENST00000428894 SPATC1Q76KD6 591 aa7.57□□□□□ -1.2
HMGB3P5-201ENST00000428894 FERMT3Q86UX7 667 aa7.57□□□□□ -1.2
HMGB3P5-201ENST00000428894 ADAMTS17Q8TE56 1095 aa7.57□□□□□ -1.2
HMGB3P5-201ENST00000428894 ZNF669Q96BR6 464 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms