RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 KINO60870 393 aaKnown RBP7.53□□□□□ -1.2
SDCBP-203ENST00000424270 ASGR2P07307 311 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 MMP3P08254 477 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 GNAI3P08754 354 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 FDX1P10109 184 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 BMP3P12645 472 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 PSEN2P49810 448 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 ALDH5A1P51649 535 aaPredicted RBP7.53□□□□□ -1.2
SDCBP-203ENST00000424270 STAT2P52630 851 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 MRPL12P52815 198 aaKnown RBP7.53□□□□□ -1.2
SDCBP-203ENST00000424270 SNAP25P60880 206 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 ARHGAP8P85298 464 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 LMNB2Q03252 620 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 RBL2Q08999 1139 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 MBTPS1Q14703 1052 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 MFSD10Q14728 455 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 PPM1JQ5JR12 505 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 SPECC1Q5M775 1068 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 CES5AQ6NT32 575 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 SESTD1Q86VW0 696 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 LCORLQ8N3X6 602 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 GPR161Q8N6U8 529 aaKnown RBP7.53□□□□□ -1.2
SDCBP-203ENST00000424270 TDRD5Q8NAT2 981 aaKnown RBP7.53□□□□□ -1.2
SDCBP-203ENST00000424270 TET1Q8NFU7 2136 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 CHURC1Q8WUH1 139 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 POF1BQ8WVV4 589 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 MEIS3Q99687 375 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 RTKNQ9BST9 563 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 BCL11AQ9H165 835 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 ARMT1Q9H993 441 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 GPR108Q9NPR9 543 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 TPRP12270 2363 aaKnown RBP7.52□□□□□ -1.21
SDCBP-203ENST00000424270 GLP2RO95838 553 aa7.52□□□□□ -1.21
SDCBP-203ENST00000424270 GH1P01241 217 aa7.52□□□□□ -1.21
SDCBP-203ENST00000424270 CA8P35219 290 aa7.52□□□□□ -1.21
SDCBP-203ENST00000424270 VASPP50552 380 aaPredicted RBP7.52□□□□□ -1.21
SDCBP-203ENST00000424270 RBM10P98175 930 aaKnown RBP7.52□□□□□ -1.21
SDCBP-203ENST00000424270 ZNF200P98182 395 aaPredicted RBP7.52□□□□□ -1.21
SDCBP-203ENST00000424270 BAATQ14032 418 aaPredicted RBP7.52□□□□□ -1.21
SDCBP-203ENST00000424270 DGKDQ16760 1214 aa7.52□□□□□ -1.21
SDCBP-203ENST00000424270 KIAA0753Q2KHM9 967 aa7.52□□□□□ -1.21
SDCBP-203ENST00000424270 PLEKHG4Q58EX7 1191 aa7.52□□□□□ -1.21
SDCBP-203ENST00000424270 MUM1L1Q5H9M0 696 aa7.52□□□□□ -1.21
SDCBP-203ENST00000424270 SLFN13Q68D06 897 aa7.52□□□□□ -1.21
SDCBP-203ENST00000424270 CWF19L1Q69YN2 538 aaKnown RBP7.52□□□□□ -1.21
SDCBP-203ENST00000424270 TMED8Q6PL24 325 aaPredicted RBP7.52□□□□□ -1.21
SDCBP-203ENST00000424270 C16orf86Q6ZW13 317 aa7.52□□□□□ -1.21
SDCBP-203ENST00000424270 SIX5Q8N196 739 aa7.52□□□□□ -1.21
SDCBP-203ENST00000424270 SSH1Q8WYL5 1049 aa7.52□□□□□ -1.21
SDCBP-203ENST00000424270 APBB2Q92870 758 aa7.52□□□□□ -1.21
SDCBP-203ENST00000424270 CCDC8Q9H0W5 538 aaPredicted RBP7.52□□□□□ -1.21
SDCBP-203ENST00000424270 ANTXR1Q9H6X2 564 aa7.52□□□□□ -1.21
SDCBP-203ENST00000424270 LIMD1Q9UGP4 676 aa7.52□□□□□ -1.21
SDCBP-203ENST00000424270 ANGPTL2Q9UKU9 493 aa7.52□□□□□ -1.21
SDCBP-203ENST00000424270 ZNF532Q9HCE3 1301 aa7.52□□□□□ -1.21
SDCBP-203ENST00000424270 NLRC5Q86WI3 1866 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 MYH8P13535 1937 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 SOBPA7XYQ1 873 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 C2CD4DB7Z1M9 353 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 PRKAB2O43741 272 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 MBD4O95243 580 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 ITGB1P05556 798 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 ZNF286BP0CG31 522 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 PDE6AP16499 860 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 SLC1A4P43007 532 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 TTF1Q15361 905 aaPredicted RBP7.51□□□□□ -1.21
SDCBP-203ENST00000424270 PAN2Q504Q3 1202 aaKnown RBP7.51□□□□□ -1.21
SDCBP-203ENST00000424270 VARS2Q5ST30 1063 aaKnown RBP7.51□□□□□ -1.21
SDCBP-203ENST00000424270 C12orf60Q5U649 245 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 SEPT14Q6ZU15 432 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 FAM160B2Q86V87 743 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 KLHL23Q8NBE8 558 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 SUSD6Q92537 303 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 ATP6V0A1Q93050 837 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 P2RX5Q93086 422 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 WNT8BQ93098 351 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 ZNF512BQ96KM6 892 aaPredicted RBP7.51□□□□□ -1.21
SDCBP-203ENST00000424270 CTAGE1Q96RT6 745 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 PRKRIP1Q9H875 184 aaPredicted RBP7.51□□□□□ -1.21
SDCBP-203ENST00000424270 ATP8A2Q9NTI2 1148 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 NYAP2Q9P242 653 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 DBR1Q9UK59 544 aaKnown RBP7.51□□□□□ -1.21
SDCBP-203ENST00000424270 MTMR7Q9Y216 660 aa7.51□□□□□ -1.21
SDCBP-203ENST00000424270 CHD6Q8TD26 2715 aa7.5□□□□□ -1.21
SDCBP-203ENST00000424270 RALGAPA2Q2PPJ7 1873 aa7.5□□□□□ -1.21
SDCBP-203ENST00000424270 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.5□□□□□ -1.21
SDCBP-203ENST00000424270 RBM47A0AV96 593 aaKnown RBP7.5□□□□□ -1.21
SDCBP-203ENST00000424270 C17orf102A2RUQ5 167 aa7.5□□□□□ -1.21
SDCBP-203ENST00000424270 DNAJB1P25685 340 aa7.5□□□□□ -1.21
SDCBP-203ENST00000424270 LY6KQ17RY6 165 aa7.5□□□□□ -1.21
SDCBP-203ENST00000424270 TPRNQ4KMQ1 711 aa7.5□□□□□ -1.21
SDCBP-203ENST00000424270 NAALADL2Q58DX5 795 aa7.5□□□□□ -1.21
SDCBP-203ENST00000424270 ANKRD54Q6NXT1 300 aa7.5□□□□□ -1.21
SDCBP-203ENST00000424270 RUFY4Q6ZNE9 571 aa7.5□□□□□ -1.21
SDCBP-203ENST00000424270 RPAP2Q8IXW5 612 aaPredicted RBP7.5□□□□□ -1.21
SDCBP-203ENST00000424270 ZNF444Q8N0Y2 327 aaPredicted RBP7.5□□□□□ -1.21
SDCBP-203ENST00000424270 SPPL3Q8TCT6 385 aa7.5□□□□□ -1.21
SDCBP-203ENST00000424270 NECTIN4Q96NY8 510 aa7.5□□□□□ -1.21
SDCBP-203ENST00000424270 DNAJC2Q99543 621 aaKnown RBP7.5□□□□□ -1.21
SDCBP-203ENST00000424270 CDCA3Q99618 268 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms