RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 FPGSQ05932 587 aa24.53■■□□□ 1.52
CPNE1-211ENST00000420363 FAAP100Q0VG06 881 aa24.53■■□□□ 1.52
CPNE1-211ENST00000420363 LY6KQ17RY6 165 aa24.53■■□□□ 1.52
CPNE1-211ENST00000420363 SLC43A3Q8NBI5 491 aa24.53■■□□□ 1.52
CPNE1-211ENST00000420363 CCDC12Q8WUD4 166 aaPredicted RBP24.53■■□□□ 1.52
CPNE1-211ENST00000420363 COPS5Q92905 334 aa24.53■■□□□ 1.52
CPNE1-211ENST00000420363 CDX2Q99626 313 aaPredicted RBP24.53■■□□□ 1.52
CPNE1-211ENST00000420363 SPDYE3A6NKU9 549 aa24.52■■□□□ 1.52
CPNE1-211ENST00000420363 SEC24BO95487 1268 aa24.52■■□□□ 1.52
CPNE1-211ENST00000420363 ICAM3P32942 547 aa24.52■■□□□ 1.52
CPNE1-211ENST00000420363 ADCY7P51828 1080 aa24.52■■□□□ 1.52
CPNE1-211ENST00000420363 ANKRD1Q15327 319 aa24.52■■□□□ 1.52
CPNE1-211ENST00000420363 EHMT1Q9H9B1 1298 aa24.52■■□□□ 1.52
CPNE1-211ENST00000420363 EPHB4P54760 987 aa24.51■■□□□ 1.51
CPNE1-211ENST00000420363 AKAP17AQ02040 695 aaKnown RBP24.51■■□□□ 1.51
CPNE1-211ENST00000420363 AP3B2Q13367 1082 aa24.51■■□□□ 1.51
CPNE1-211ENST00000420363 PKN1Q16512 942 aa24.51■■□□□ 1.51
CPNE1-211ENST00000420363 UBE2SQ16763 222 aa24.51■■□□□ 1.51
CPNE1-211ENST00000420363 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.51■■□□□ 1.51
CPNE1-211ENST00000420363 NCOA5Q9HCD5 579 aaKnown RBP24.51■■□□□ 1.51
CPNE1-211ENST00000420363 FOSP01100 380 aaPredicted RBP24.5■■□□□ 1.51
CPNE1-211ENST00000420363 MMP3P08254 477 aa24.5■■□□□ 1.51
CPNE1-211ENST00000420363 CCT2P78371 535 aaKnown RBP24.5■■□□□ 1.51
CPNE1-211ENST00000420363 LAMC2Q13753 1193 aa24.5■■□□□ 1.51
CPNE1-211ENST00000420363 PHKBQ93100 1093 aa24.5■■□□□ 1.51
CPNE1-211ENST00000420363 MTG1Q9BT17 334 aaPredicted RBP24.5■■□□□ 1.51
CPNE1-211ENST00000420363 MYH7BA7E2Y1 1941 aa24.49■■□□□ 1.51
CPNE1-211ENST00000420363 SMCO2A6NFE2 343 aa24.49■■□□□ 1.51
CPNE1-211ENST00000420363 FIBPO43427 364 aa24.49■■□□□ 1.51
CPNE1-211ENST00000420363 TIMP1P01033 207 aa24.49■■□□□ 1.51
CPNE1-211ENST00000420363 HOXD8P13378 290 aaPredicted RBP24.49■■□□□ 1.51
CPNE1-211ENST00000420363 UBA1P22314 1058 aaKnown RBP24.49■■□□□ 1.51
CPNE1-211ENST00000420363 CLK2P49760 499 aaKnown RBP24.49■■□□□ 1.51
CPNE1-211ENST00000420363 ITGA7Q13683 1181 aa24.49■■□□□ 1.51
CPNE1-211ENST00000420363 CPLX2Q6PUV4 134 aaKnown RBP24.49■■□□□ 1.51
CPNE1-211ENST00000420363 FAM126BQ8IXS8 530 aa24.49■■□□□ 1.51
CPNE1-211ENST00000420363 TRIM22Q8IYM9 498 aa24.49■■□□□ 1.51
CPNE1-211ENST00000420363 PPTC7Q8NI37 304 aa24.49■■□□□ 1.51
CPNE1-211ENST00000420363 ZMYND12Q9H0C1 365 aa24.49■■□□□ 1.51
CPNE1-211ENST00000420363 PCDHA6Q9UN73 950 aa24.49■■□□□ 1.51
CPNE1-211ENST00000420363 PCDHA8Q9Y5H6 950 aa24.49■■□□□ 1.51
CPNE1-211ENST00000420363 CPLX1O14810 134 aa24.48■■□□□ 1.51
CPNE1-211ENST00000420363 MYL3P08590 195 aa24.48■■□□□ 1.51
CPNE1-211ENST00000420363 CELF3Q5SZQ8 465 aaKnown RBP24.48■■□□□ 1.51
CPNE1-211ENST00000420363 CCDC148Q8NFR7 591 aa24.48■■□□□ 1.51
CPNE1-211ENST00000420363 AFG1LQ8WV93 481 aa24.48■■□□□ 1.51
CPNE1-211ENST00000420363 GPRASP2Q96D09 838 aa24.48■■□□□ 1.51
CPNE1-211ENST00000420363 SLC26A6Q9BXS9 759 aa24.48■■□□□ 1.51
CPNE1-211ENST00000420363 CUL9Q8IWT3 2517 aa24.48■■□□□ 1.51
CPNE1-211ENST00000420363 GRIN2DO15399 1336 aa24.47■■□□□ 1.51
CPNE1-211ENST00000420363 SPATA31C2B4DYI2 1134 aa24.47■■□□□ 1.51
CPNE1-211ENST00000420363 TLR3O15455 904 aaKnown RBP24.47■■□□□ 1.51
CPNE1-211ENST00000420363 MYSM1Q5VVJ2 828 aa24.47■■□□□ 1.51
CPNE1-211ENST00000420363 MCTP2Q6DN12 878 aa24.47■■□□□ 1.51
CPNE1-211ENST00000420363 DHX37Q8IY37 1157 aaKnown RBP24.47■■□□□ 1.51
CPNE1-211ENST00000420363 FAM177A1Q8N128 213 aaPredicted RBP24.47■■□□□ 1.51
CPNE1-211ENST00000420363 CDHR1Q96JP9 859 aa24.47■■□□□ 1.51
CPNE1-211ENST00000420363 TTYH1Q9H313 450 aaPredicted RBP24.47■■□□□ 1.51
CPNE1-211ENST00000420363 SH3GLB2Q9NR46 395 aa24.47■■□□□ 1.51
CPNE1-211ENST00000420363 TBX21Q9UL17 535 aa24.47■■□□□ 1.51
CPNE1-211ENST00000420363 PFKFB2O60825 505 aa24.46■■□□□ 1.51
CPNE1-211ENST00000420363 CDKL5O76039 1030 aa24.46■■□□□ 1.51
CPNE1-211ENST00000420363 GGPS1O95749 300 aa24.46■■□□□ 1.51
CPNE1-211ENST00000420363 GNA11P29992 359 aa24.46■■□□□ 1.51
CPNE1-211ENST00000420363 AK2P54819 239 aa24.46■■□□□ 1.51
CPNE1-211ENST00000420363 NEDD9Q14511 834 aa24.46■■□□□ 1.51
CPNE1-211ENST00000420363 DGKDQ16760 1214 aa24.46■■□□□ 1.51
CPNE1-211ENST00000420363 NLRX1Q86UT6 975 aa24.46■■□□□ 1.51
CPNE1-211ENST00000420363 SENP7Q9BQF6 1050 aa24.46■■□□□ 1.51
CPNE1-211ENST00000420363 ANO3Q9BYT9 981 aa24.46■■□□□ 1.51
CPNE1-211ENST00000420363 C6orf50Q9HD87 102 aa24.46■■□□□ 1.51
CPNE1-211ENST00000420363 TPCN1Q9ULQ1 816 aa24.46■■□□□ 1.51
CPNE1-211ENST00000420363 UNC80Q8N2C7 3258 aa24.46■■□□□ 1.51
CPNE1-211ENST00000420363 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-211ENST00000420363 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-211ENST00000420363 DEXIO95424 95 aa24.45■■□□□ 1.5
CPNE1-211ENST00000420363 CD4P01730 458 aa24.45■■□□□ 1.5
CPNE1-211ENST00000420363 SP2Q02086 613 aa24.45■■□□□ 1.5
CPNE1-211ENST00000420363 SSRP1Q08945 709 aaKnown RBP24.45■■□□□ 1.5
CPNE1-211ENST00000420363 SEMA3FQ13275 785 aa24.45■■□□□ 1.5
CPNE1-211ENST00000420363 MFSD5Q6N075 450 aa24.45■■□□□ 1.5
CPNE1-211ENST00000420363 MAFAQ8NHW3 353 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-211ENST00000420363 MYLIPQ8WY64 445 aa24.45■■□□□ 1.5
CPNE1-211ENST00000420363 LARP6Q9BRS8 491 aaKnown RBP24.45■■□□□ 1.5
CPNE1-211ENST00000420363 SLKQ9H2G2 1235 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-211ENST00000420363 UBIAD1Q9Y5Z9 338 aa24.45■■□□□ 1.5
CPNE1-211ENST00000420363 STK36Q9NRP7 1315 aa24.44■■□□□ 1.5
CPNE1-211ENST00000420363 MAFGO15525 162 aa24.44■■□□□ 1.5
CPNE1-211ENST00000420363 SREBF1P36956 1147 aa24.44■■□□□ 1.5
CPNE1-211ENST00000420363 PSMC6P62333 389 aa24.44■■□□□ 1.5
CPNE1-211ENST00000420363 PTPN11Q06124 597 aaPredicted RBP24.44■■□□□ 1.5
CPNE1-211ENST00000420363 SCRN1Q12765 414 aa24.44■■□□□ 1.5
CPNE1-211ENST00000420363 STK3Q13188 491 aa24.44■■□□□ 1.5
CPNE1-211ENST00000420363 NFRKBQ6P4R8 1299 aa24.44■■□□□ 1.5
CPNE1-211ENST00000420363 METTL7BQ6UX53 244 aa24.44■■□□□ 1.5
CPNE1-211ENST00000420363 REXO1Q8N1G1 1221 aaKnown RBP24.44■■□□□ 1.5
CPNE1-211ENST00000420363 BICD2Q8TD16 824 aa24.44■■□□□ 1.5
CPNE1-211ENST00000420363 SPATA33Q96N06 139 aa24.44■■□□□ 1.5
CPNE1-211ENST00000420363 RTEL1Q9NZ71 1219 aa24.44■■□□□ 1.5
CPNE1-211ENST00000420363 TMEM265A0A087WTH1 108 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms