RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 VMP1Q96GC9 406 aa20■□□□□ 0.79
SHANK3-202ENST00000414786 CCND2P30279 289 aa20■□□□□ 0.79
SHANK3-202ENST00000414786 SLC7A3Q8WY07 619 aa20■□□□□ 0.79
SHANK3-202ENST00000414786 TMEM247A6NEH6 219 aa20■□□□□ 0.79
SHANK3-202ENST00000414786 E7EWF7 191 aa20■□□□□ 0.79
SHANK3-202ENST00000414786 DDHD2O94830 711 aa20■□□□□ 0.79
SHANK3-202ENST00000414786 ASMTLO95671 621 aa20■□□□□ 0.79
SHANK3-202ENST00000414786 FAM133BQ5BKY9 247 aaKnown RBP20■□□□□ 0.79
SHANK3-202ENST00000414786 SLFN12Q8IYM2 578 aa20■□□□□ 0.79
SHANK3-202ENST00000414786 CTSWP56202 376 aa20■□□□□ 0.79
SHANK3-202ENST00000414786 MAGEB10Q96LZ2 347 aaPredicted RBP20■□□□□ 0.79
SHANK3-202ENST00000414786 SFI1A8K8P3 1242 aa19.99■□□□□ 0.79
SHANK3-202ENST00000414786 FLOT2Q14254 428 aa19.99■□□□□ 0.79
SHANK3-202ENST00000414786 IFT43Q96FT9 208 aa19.99■□□□□ 0.79
SHANK3-202ENST00000414786 Q9H521 79 aa19.99■□□□□ 0.79
SHANK3-202ENST00000414786 DACH2Q96NX9 599 aa19.99■□□□□ 0.79
SHANK3-202ENST00000414786 CASS4Q9NQ75 786 aa19.99■□□□□ 0.79
SHANK3-202ENST00000414786 EPS15L1Q9UBC2 864 aa19.99■□□□□ 0.79
SHANK3-202ENST00000414786 SUPT6HQ7KZ85 1726 aaKnown RBP19.99■□□□□ 0.79
SHANK3-202ENST00000414786 PMS1P54277 932 aaKnown RBP19.99■□□□□ 0.79
SHANK3-202ENST00000414786 MAP7D3Q8IWC1 876 aa19.99■□□□□ 0.79
SHANK3-202ENST00000414786 SMYD4Q8IYR2 804 aaPredicted RBP19.99■□□□□ 0.79
SHANK3-202ENST00000414786 PPP1R36Q96LQ0 422 aa19.99■□□□□ 0.79
SHANK3-202ENST00000414786 CDV3Q9UKY7 258 aaKnown RBP19.99■□□□□ 0.79
SHANK3-202ENST00000414786 SAR1BQ9Y6B6 198 aa19.99■□□□□ 0.79
SHANK3-202ENST00000414786 TMTC1Q8IUR5 882 aa19.99■□□□□ 0.79
SHANK3-202ENST00000414786 MOCS2O96007 188 aaPredicted RBP19.99■□□□□ 0.79
SHANK3-202ENST00000414786 ARL4DP49703 201 aa19.99■□□□□ 0.79
SHANK3-202ENST00000414786 MCF2LO15068 1137 aa19.99■□□□□ 0.79
SHANK3-202ENST00000414786 C10orf76Q5T2E6 689 aa19.99■□□□□ 0.79
SHANK3-202ENST00000414786 KRT80Q6KB66 452 aa19.99■□□□□ 0.79
SHANK3-202ENST00000414786 IWS1Q96ST2 819 aa19.99■□□□□ 0.79
SHANK3-202ENST00000414786 PRR23AA6NEV1 266 aa19.98■□□□□ 0.79
SHANK3-202ENST00000414786 GCKRQ14397 625 aa19.98■□□□□ 0.79
SHANK3-202ENST00000414786 PPP6R3Q5H9R7 873 aaPredicted RBP19.98■□□□□ 0.79
SHANK3-202ENST00000414786 MAGOHBQ96A72 148 aaKnown RBP19.98■□□□□ 0.79
SHANK3-202ENST00000414786 SOS1Q07889 1333 aaPredicted RBP19.98■□□□□ 0.79
SHANK3-202ENST00000414786 SETSIPP0DME0 302 aa19.98■□□□□ 0.79
SHANK3-202ENST00000414786 NUMBP49757 651 aa19.98■□□□□ 0.79
SHANK3-202ENST00000414786 GUCY2DQ02846 1103 aa19.98■□□□□ 0.79
SHANK3-202ENST00000414786 KCNA6P17658 529 aa19.98■□□□□ 0.79
SHANK3-202ENST00000414786 PASD1Q8IV76 773 aa19.98■□□□□ 0.79
SHANK3-202ENST00000414786 TBC1D22AQ8WUA7 517 aa19.98■□□□□ 0.79
SHANK3-202ENST00000414786 LZTS2Q9BRK4 669 aa19.98■□□□□ 0.79
SHANK3-202ENST00000414786 UBE2TQ9NPD8 197 aaPredicted RBP19.98■□□□□ 0.79
SHANK3-202ENST00000414786 ATP8B3O60423 1300 aa19.98■□□□□ 0.79
SHANK3-202ENST00000414786 MROH5Q6ZUA9 1318 aa19.98■□□□□ 0.79
SHANK3-202ENST00000414786 PFDN1O60925 122 aa19.98■□□□□ 0.79
SHANK3-202ENST00000414786 ATP6V0A1Q93050 837 aa19.98■□□□□ 0.79
SHANK3-202ENST00000414786 E2F6O75461 281 aa19.98■□□□□ 0.79
SHANK3-202ENST00000414786 CLCN1P35523 988 aa19.98■□□□□ 0.79
SHANK3-202ENST00000414786 SMC5Q8IY18 1101 aa19.98■□□□□ 0.79
SHANK3-202ENST00000414786 NACC1Q96RE7 527 aa19.98■□□□□ 0.79
SHANK3-202ENST00000414786 IBTKQ9P2D0 1353 aaPredicted RBP19.98■□□□□ 0.79
SHANK3-202ENST00000414786 MYO1FO00160 1098 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 OGFRQ9NZT2 677 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 CCDC195A0A1B0GUA6 201 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 GOLGA8MH3BSY2 632 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 GNA14O95837 355 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 COA7Q96BR5 231 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 ARPP21Q9UBL0 812 aaPredicted RBP19.97■□□□□ 0.79
SHANK3-202ENST00000414786 PIK3R2O00459 728 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 PSMC1P62191 440 aaKnown RBP19.97■□□□□ 0.79
SHANK3-202ENST00000414786 RBBP7Q16576 425 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 ERFEQ4G0M1 354 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 ANKRD20A4Q4UJ75 823 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 ANKRD20A8PQ5CZ79 823 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 ANKRD20A2Q5SQ80 823 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 ANKRD20A1Q5TYW2 823 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 MLKLQ8NB16 471 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 NDFIP2Q9NV92 336 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 SNX2O60749 519 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 HIP1RO75146 1068 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 SOX11P35716 441 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 MSH2P43246 934 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 HECW1Q76N89 1606 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 YTHDC2Q9H6S0 1430 aaKnown RBP19.97■□□□□ 0.79
SHANK3-202ENST00000414786 DNAJC6O75061 913 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 BRD2P25440 801 aaKnown RBP19.97■□□□□ 0.79
SHANK3-202ENST00000414786 UBE2SQ16763 222 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 EXOC3L4Q17RC7 722 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 EFCAB13Q8IY85 973 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 CNKSR1Q969H4 720 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 ELMSAN1Q6PJG2 1045 aa19.97■□□□□ 0.79
SHANK3-202ENST00000414786 MFAP3P55082 362 aa19.96■□□□□ 0.79
SHANK3-202ENST00000414786 GFPT2O94808 682 aa19.96■□□□□ 0.79
SHANK3-202ENST00000414786 CCDC124Q96CT7 223 aaKnown RBP19.96■□□□□ 0.79
SHANK3-202ENST00000414786 NT5C1BQ96P26 610 aa19.96■□□□□ 0.79
SHANK3-202ENST00000414786 XPO4Q9C0E2 1151 aaKnown RBP19.96■□□□□ 0.79
SHANK3-202ENST00000414786 EHBP1L1Q8N3D4 1523 aa19.96■□□□□ 0.79
SHANK3-202ENST00000414786 ZNF75DP51815 510 aa19.96■□□□□ 0.79
SHANK3-202ENST00000414786 SF3B3Q15393 1217 aaKnown RBP19.96■□□□□ 0.79
SHANK3-202ENST00000414786 ADCK2Q7Z695 626 aa19.96■□□□□ 0.79
SHANK3-202ENST00000414786 NEK8Q86SG6 692 aa19.96■□□□□ 0.79
SHANK3-202ENST00000414786 POLD4Q9HCU8 107 aa19.96■□□□□ 0.79
SHANK3-202ENST00000414786 EIF2AK2P19525 551 aaKnown RBP19.96■□□□□ 0.79
SHANK3-202ENST00000414786 PSMC5P62195 406 aa19.96■□□□□ 0.79
SHANK3-202ENST00000414786 TSC1Q92574 1164 aa19.96■□□□□ 0.79
SHANK3-202ENST00000414786 CCDC90BQ9GZT6 254 aa19.96■□□□□ 0.79
SHANK3-202ENST00000414786 PRPSAP2O60256 369 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms