RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 EYA3Q99504 573 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 LSM14BQ9BX40 385 aaKnown RBP15.19■□□□□ 0.02
COL6A2-203ENST00000397763 ANKRD36CQ5JPF3 1778 aa15.18■□□□□ 0.02
COL6A2-203ENST00000397763 DCCP43146 1447 aa15.18■□□□□ 0.02
COL6A2-203ENST00000397763 ACTN1P12814 892 aa15.18■□□□□ 0.02
COL6A2-203ENST00000397763 HLTFQ14527 1009 aaKnown RBP eCLIP15.18■□□□□ 0.02
COL6A2-203ENST00000397763 FAM182BQ5T319 152 aa15.18■□□□□ 0.02
COL6A2-203ENST00000397763 CENPPQ6IPU0 288 aa15.18■□□□□ 0.02
COL6A2-203ENST00000397763 TSGA10Q9BZW7 698 aa15.18■□□□□ 0.02
COL6A2-203ENST00000397763 BCCIPQ9P287 314 aaKnown RBP eCLIP15.18■□□□□ 0.02
COL6A2-203ENST00000397763 ZNF233A6NK53 670 aa15.18■□□□□ 0.02
COL6A2-203ENST00000397763 NFIXQ14938 502 aa15.18■□□□□ 0.02
COL6A2-203ENST00000397763 MAN2A1Q16706 1144 aa15.18■□□□□ 0.02
COL6A2-203ENST00000397763 CFAP58Q5T655 872 aa15.18■□□□□ 0.02
COL6A2-203ENST00000397763 KCNV1Q6PIU1 500 aa15.18■□□□□ 0.02
COL6A2-203ENST00000397763 REXO1Q8N1G1 1221 aaKnown RBP15.18■□□□□ 0.02
COL6A2-203ENST00000397763 OTUD6BQ8N6M0 293 aa15.18■□□□□ 0.02
COL6A2-203ENST00000397763 CEP95Q96GE4 821 aa15.18■□□□□ 0.02
COL6A2-203ENST00000397763 NOX5Q96PH1 765 aa15.18■□□□□ 0.02
COL6A2-203ENST00000397763 SEC63Q9UGP8 760 aaKnown RBP15.18■□□□□ 0.02
COL6A2-203ENST00000397763 MYH14Q7Z406 1995 aaKnown RBP15.18■□□□□ 0.02
COL6A2-203ENST00000397763 PALM3A6NDB9 673 aaPredicted RBP15.17■□□□□ 0.02
COL6A2-203ENST00000397763 PCP11498 1178 aaKnown RBP15.17■□□□□ 0.02
COL6A2-203ENST00000397763 EPHB4P54760 987 aa15.17■□□□□ 0.02
COL6A2-203ENST00000397763 EP400NLQ6ZTU2 488 aa15.17■□□□□ 0.02
COL6A2-203ENST00000397763 LINC00116Q8NCU8 138 aa15.17■□□□□ 0.02
COL6A2-203ENST00000397763 AP1M1Q9BXS5 423 aa15.17■□□□□ 0.02
COL6A2-203ENST00000397763 C6orf50Q9HD87 102 aa15.17■□□□□ 0.02
COL6A2-203ENST00000397763 ZNF652Q9Y2D9 606 aa15.17■□□□□ 0.02
COL6A2-203ENST00000397763 A0A087X0T9 212 aa15.17■□□□□ 0.02
COL6A2-203ENST00000397763 FAM228BP0C875 321 aa15.17■□□□□ 0.02
COL6A2-203ENST00000397763 SLC16A2P36021 539 aa15.17■□□□□ 0.02
COL6A2-203ENST00000397763 AMPD3Q01432 767 aa15.17■□□□□ 0.02
COL6A2-203ENST00000397763 KIAA0753Q2KHM9 967 aa15.17■□□□□ 0.02
COL6A2-203ENST00000397763 NLRP3Q96P20 1036 aa15.17■□□□□ 0.02
COL6A2-203ENST00000397763 SH3GLB2Q9NR46 395 aa15.17■□□□□ 0.02
COL6A2-203ENST00000397763 SHOX2O60902 331 aaPredicted RBP15.17■□□□□ 0.02
COL6A2-203ENST00000397763 TCP1P17987 556 aaKnown RBP15.17■□□□□ 0.02
COL6A2-203ENST00000397763 PICALMQ13492 652 aa15.17■□□□□ 0.02
COL6A2-203ENST00000397763 HGSNATQ68CP4 663 aa15.17■□□□□ 0.02
COL6A2-203ENST00000397763 PDXDC1Q6P996 788 aa15.17■□□□□ 0.02
COL6A2-203ENST00000397763 CASKIN2Q8WXE0 1202 aa15.17■□□□□ 0.02
COL6A2-203ENST00000397763 ZMYND12Q9H0C1 365 aa15.17■□□□□ 0.02
COL6A2-203ENST00000397763 BCAS3Q9H6U6 928 aa15.17■□□□□ 0.02
COL6A2-203ENST00000397763 E9PMD0 336 aa15.16■□□□□ 0.02
COL6A2-203ENST00000397763 ATP2C2O75185 946 aa15.16■□□□□ 0.02
COL6A2-203ENST00000397763 SBK1Q52WX2 424 aa15.16■□□□□ 0.02
COL6A2-203ENST00000397763 FAM83BQ5T0W9 1011 aa15.16■□□□□ 0.02
COL6A2-203ENST00000397763 KRT25Q7Z3Z0 450 aa15.16■□□□□ 0.02
COL6A2-203ENST00000397763 PPANQ9NQ55 473 aaKnown RBP15.16■□□□□ 0.02
COL6A2-203ENST00000397763 ARAP2Q8WZ64 1704 aa15.16■□□□□ 0.02
COL6A2-203ENST00000397763 CDK8P49336 464 aa15.16■□□□□ 0.02
COL6A2-203ENST00000397763 GNAQP50148 359 aa15.16■□□□□ 0.02
COL6A2-203ENST00000397763 SETQ01105 290 aaPredicted RBP15.16■□□□□ 0.02
COL6A2-203ENST00000397763 SF3B3Q15393 1217 aaKnown RBP15.16■□□□□ 0.02
COL6A2-203ENST00000397763 LRRC55Q6ZSA7 311 aa15.16■□□□□ 0.02
COL6A2-203ENST00000397763 CXorf56Q9H5V9 222 aa15.16■□□□□ 0.02
COL6A2-203ENST00000397763 F8W031 263 aaPredicted RBP15.15■□□□□ 0.02
COL6A2-203ENST00000397763 OPA1O60313 960 aa15.15■□□□□ 0.02
COL6A2-203ENST00000397763 CFAP221Q4G0U5 840 aa15.15■□□□□ 0.02
COL6A2-203ENST00000397763 CD248Q9HCU0 757 aa15.15■□□□□ 0.02
COL6A2-203ENST00000397763 A0A1W2PQJ5 194 aa15.15■□□□□ 0.02
COL6A2-203ENST00000397763 KCNK3O14649 394 aa15.15■□□□□ 0.02
COL6A2-203ENST00000397763 RAD51CO43502 376 aa15.15■□□□□ 0.02
COL6A2-203ENST00000397763 CEP85LQ5SZL2 805 aa15.15■□□□□ 0.02
COL6A2-203ENST00000397763 AMIGO3Q86WK7 504 aa15.15■□□□□ 0.02
COL6A2-203ENST00000397763 SUGP1Q8IWZ8 645 aaKnown RBP15.15■□□□□ 0.02
COL6A2-203ENST00000397763 EDIL3O43854 480 aa15.15■□□□□ 0.02
COL6A2-203ENST00000397763 NOL4O94818 638 aa15.15■□□□□ 0.02
COL6A2-203ENST00000397763 CPP00450 1065 aa15.15■□□□□ 0.02
COL6A2-203ENST00000397763 SFMBT2Q5VUG0 894 aa15.15■□□□□ 0.02
COL6A2-203ENST00000397763 UNC13DQ70J99 1090 aa15.15■□□□□ 0.02
COL6A2-203ENST00000397763 ADAT2Q7Z6V5 191 aaKnown RBP15.15■□□□□ 0.02
COL6A2-203ENST00000397763 A0A1B0GUL6 1792 aa15.14■□□□□ 0.01
COL6A2-203ENST00000397763 GOLGA8KD6RF30 607 aa15.14■□□□□ 0.01
COL6A2-203ENST00000397763 PRPHP41219 470 aa15.14■□□□□ 0.01
COL6A2-203ENST00000397763 TTBK2Q6IQ55 1244 aa15.14■□□□□ 0.01
COL6A2-203ENST00000397763 CHADLQ6NUI6 762 aa15.14■□□□□ 0.01
COL6A2-203ENST00000397763 SH3GL2Q99962 352 aa15.14■□□□□ 0.01
COL6A2-203ENST00000397763 TRIM31Q9BZY9 425 aa15.14■□□□□ 0.01
COL6A2-203ENST00000397763 NHSL1Q5SYE7 1610 aa15.14■□□□□ 0.01
COL6A2-203ENST00000397763 MYL1P05976 194 aa15.14■□□□□ 0.01
COL6A2-203ENST00000397763 GNA11P29992 359 aa15.14■□□□□ 0.01
COL6A2-203ENST00000397763 STAT3P40763 770 aa15.14■□□□□ 0.01
COL6A2-203ENST00000397763 BTDP43251 543 aa15.14■□□□□ 0.01
COL6A2-203ENST00000397763 ZNF662Q6ZS27 426 aa15.14■□□□□ 0.01
COL6A2-203ENST00000397763 CCDC84Q86UT8 332 aaPredicted RBP15.14■□□□□ 0.01
COL6A2-203ENST00000397763 FAM212AQ96EL1 285 aa15.14■□□□□ 0.01
COL6A2-203ENST00000397763 AK8Q96MA6 479 aa15.14■□□□□ 0.01
COL6A2-203ENST00000397763 SETDB2Q96T68 719 aa15.14■□□□□ 0.01
COL6A2-203ENST00000397763 SLC9C1Q4G0N8 1177 aa15.13■□□□□ 0.01
COL6A2-203ENST00000397763 NAA35Q5VZE5 725 aa15.13■□□□□ 0.01
COL6A2-203ENST00000397763 KRT79Q5XKE5 535 aa15.13■□□□□ 0.01
COL6A2-203ENST00000397763 IFT20Q8IY31 132 aa15.13■□□□□ 0.01
COL6A2-203ENST00000397763 IKZF4Q9H2S9 585 aa15.13■□□□□ 0.01
COL6A2-203ENST00000397763 LRRC4CQ9HCJ2 640 aa15.13■□□□□ 0.01
COL6A2-203ENST00000397763 CEP104O60308 925 aa15.13■□□□□ 0.01
COL6A2-203ENST00000397763 ECM2O94769 699 aaPredicted RBP15.13■□□□□ 0.01
COL6A2-203ENST00000397763 USP8P40818 1118 aa15.13■□□□□ 0.01
COL6A2-203ENST00000397763 HDLBPQ00341 1268 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms