RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 MYZAPP0CAP1 466 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 CDK8P49336 464 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 SF3B2Q13435 895 aaKnown RBP14.55□□□□□ -0.08
NFKB1-202ENST00000394820 TUBB2AQ13885 445 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 PPP1R7Q15435 360 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 SFMBT2Q5VUG0 894 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 BARGINQ6ZT62 677 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 EFCAB13Q8IY85 973 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 TUBB2BQ9BVA1 445 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 RBM12Q9NTZ6 932 aaKnown RBP14.55□□□□□ -0.08
NFKB1-202ENST00000394820 ATP8A1Q9Y2Q0 1164 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 ABCC6O95255 1503 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 PALMO75781 387 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 TMOD1P28289 359 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 PAK2Q13177 524 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 CALCRLQ16602 461 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 RCSD1Q6JBY9 416 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 CNNM4Q6P4Q7 775 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 TBCKQ8TEA7 893 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 NDST4Q9H3R1 872 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 ZBTB21Q9ULJ3 1066 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 NOVA2Q9UNW9 492 aaKnown RBP14.55□□□□□ -0.08
NFKB1-202ENST00000394820 ZBED6P86452 979 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 PRR5LQ6MZQ0 368 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 DPP8Q6V1X1 898 aaPredicted RBP14.55□□□□□ -0.08
NFKB1-202ENST00000394820 B4GALNT4Q76KP1 1039 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 U2AF1L4Q8WU68 220 aaKnown RBP14.55□□□□□ -0.08
NFKB1-202ENST00000394820 OSBPL9Q96SU4 736 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 PYM1Q9BRP8 204 aaKnown RBP14.55□□□□□ -0.08
NFKB1-202ENST00000394820 DDX47Q9H0S4 455 aaKnown RBP14.55□□□□□ -0.08
NFKB1-202ENST00000394820 TCEAL9Q9UHQ7 104 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 PCDHA4Q9UN74 947 aa14.55□□□□□ -0.08
NFKB1-202ENST00000394820 USP17L5A8MUK1 530 aa14.54□□□□□ -0.08
NFKB1-202ENST00000394820 SEMA3EO15041 775 aa14.54□□□□□ -0.08
NFKB1-202ENST00000394820 TNNC1P63316 161 aa14.54□□□□□ -0.08
NFKB1-202ENST00000394820 UBE2SQ16763 222 aa14.54□□□□□ -0.08
NFKB1-202ENST00000394820 CCNI2Q6ZMN8 369 aaPredicted RBP14.54□□□□□ -0.08
NFKB1-202ENST00000394820 ANKRD42Q8N9B4 389 aa14.54□□□□□ -0.08
NFKB1-202ENST00000394820 CEP95Q96GE4 821 aa14.54□□□□□ -0.08
NFKB1-202ENST00000394820 LRP6O75581 1613 aa14.54□□□□□ -0.08
NFKB1-202ENST00000394820 SFI1A8K8P3 1242 aa14.54□□□□□ -0.08
NFKB1-202ENST00000394820 KRIT1O00522 736 aa14.54□□□□□ -0.08
NFKB1-202ENST00000394820 ZNF579Q8NAF0 562 aaKnown RBP14.54□□□□□ -0.08
NFKB1-202ENST00000394820 ZC3H12CQ9C0D7 883 aaKnown RBP14.54□□□□□ -0.08
NFKB1-202ENST00000394820 STIM2Q9P246 746 aa14.54□□□□□ -0.08
NFKB1-202ENST00000394820 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.54□□□□□ -0.08
NFKB1-202ENST00000394820 MYH2Q9UKX2 1941 aa14.54□□□□□ -0.08
NFKB1-202ENST00000394820 ITGB4P16144 1822 aa14.54□□□□□ -0.08
NFKB1-202ENST00000394820 ORC4O43929 436 aa14.54□□□□□ -0.08
NFKB1-202ENST00000394820 OR52Z1P0C646 297 aa14.54□□□□□ -0.08
NFKB1-202ENST00000394820 ATP2C1P98194 919 aaPredicted RBP14.54□□□□□ -0.08
NFKB1-202ENST00000394820 IL17AQ16552 155 aa14.54□□□□□ -0.08
NFKB1-202ENST00000394820 AEBP2Q6ZN18 517 aaPredicted RBP14.54□□□□□ -0.08
NFKB1-202ENST00000394820 PEX26Q7Z412 305 aa14.54□□□□□ -0.08
NFKB1-202ENST00000394820 VPS36Q86VN1 386 aa14.54□□□□□ -0.08
NFKB1-202ENST00000394820 ANKRD62A6NC57 917 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 CLIC2O15247 247 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 NR1D1P20393 614 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 COPB2P35606 906 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 GNAQP50148 359 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 CLNS1AP54105 237 aaKnown RBP14.53□□□□□ -0.08
NFKB1-202ENST00000394820 SNAP25P60880 206 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 HERVK_113P62684 666 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 MUM1L1Q5H9M0 696 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 CAPN12Q6ZSI9 719 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 SEPT12Q8IYM1 358 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 CD248Q9HCU0 757 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 TUBB4BP68371 445 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 NBPF9Q3BBW0 867 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 USH1GQ495M9 461 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 PHLDB2Q86SQ0 1253 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 REXO1Q8N1G1 1221 aaKnown RBP14.53□□□□□ -0.08
NFKB1-202ENST00000394820 NUP58Q9BVL2 599 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 ZNF287Q9HBT7 754 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 CHORDC1Q9UHD1 332 aaPredicted RBP14.53□□□□□ -0.08
NFKB1-202ENST00000394820 BAZ2AQ9UIF9 1905 aaKnown RBP14.53□□□□□ -0.08
NFKB1-202ENST00000394820 ZKSCAN8Q15776 578 aaPredicted RBP14.53□□□□□ -0.08
NFKB1-202ENST00000394820 ASIC2Q16515 512 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 FAM133BQ5BKY9 247 aaKnown RBP14.53□□□□□ -0.08
NFKB1-202ENST00000394820 SLC10A5Q5PT55 438 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 ZNF526Q8TF50 670 aaPredicted RBP14.53□□□□□ -0.08
NFKB1-202ENST00000394820 MYCBPQ99417 103 aaPredicted RBP14.53□□□□□ -0.08
NFKB1-202ENST00000394820 TSGA10Q9BZW7 698 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 PLAAQ9Y263 795 aa14.53□□□□□ -0.08
NFKB1-202ENST00000394820 UBR2Q8IWV8 1755 aa14.52□□□□□ -0.08
NFKB1-202ENST00000394820 CYTH3O43739 400 aa14.52□□□□□ -0.08
NFKB1-202ENST00000394820 TCP1P17987 556 aaKnown RBP14.52□□□□□ -0.08
NFKB1-202ENST00000394820 ARHGAP25P42331 645 aa14.52□□□□□ -0.08
NFKB1-202ENST00000394820 MMS22LQ6ZRQ5 1243 aa14.52□□□□□ -0.08
NFKB1-202ENST00000394820 SYCP3Q8IZU3 236 aa14.52□□□□□ -0.08
NFKB1-202ENST00000394820 SLC24A3Q9HC58 644 aa14.52□□□□□ -0.08
NFKB1-202ENST00000394820 LRRC4BQ9NT99 713 aa14.52□□□□□ -0.08
NFKB1-202ENST00000394820 MYH14Q7Z406 1995 aaKnown RBP14.52□□□□□ -0.08
NFKB1-202ENST00000394820 PPP1R12BO60237 982 aaPredicted RBP14.52□□□□□ -0.09
NFKB1-202ENST00000394820 CCNE1P24864 410 aa14.52□□□□□ -0.09
NFKB1-202ENST00000394820 DHX9Q08211 1270 aaKnown RBP14.52□□□□□ -0.09
NFKB1-202ENST00000394820 TRADDQ15628 312 aa14.52□□□□□ -0.09
NFKB1-202ENST00000394820 KCTD1Q719H9 257 aa14.52□□□□□ -0.09
NFKB1-202ENST00000394820 OTUD6AQ7L8S5 288 aa14.52□□□□□ -0.09
NFKB1-202ENST00000394820 KIAA0825Q8IV33 1275 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms