RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 NLGN2Q8NFZ4 835 aa6.29□□□□□ -1.4
USP48-202ENST00000374730 IRF2BPLQ9H1B7 796 aa6.29□□□□□ -1.4
USP48-202ENST00000374730 PANK3Q9H999 370 aa6.29□□□□□ -1.4
USP48-202ENST00000374730 PDLIM7Q9NR12 457 aa6.29□□□□□ -1.4
USP48-202ENST00000374730 CGGBP1Q9UFW8 167 aaPredicted RBP6.29□□□□□ -1.4
USP48-202ENST00000374730 ARHGEF28Q8N1W1 1705 aaKnown RBP6.28□□□□□ -1.4
USP48-202ENST00000374730 REREQ9P2R6 1566 aa6.28□□□□□ -1.4
USP48-202ENST00000374730 ANKRD34BA5PLL1 514 aa6.28□□□□□ -1.4
USP48-202ENST00000374730 NUDT19A8MXV4 375 aa6.28□□□□□ -1.4
USP48-202ENST00000374730 CYBBP04839 570 aa6.28□□□□□ -1.4
USP48-202ENST00000374730 MSL3P1P0C860 447 aa6.28□□□□□ -1.4
USP48-202ENST00000374730 NAT2P11245 290 aa6.28□□□□□ -1.4
USP48-202ENST00000374730 ATF4P18848 351 aaPredicted RBP6.28□□□□□ -1.4
USP48-202ENST00000374730 MAPKAPK2P49137 400 aa6.28□□□□□ -1.4
USP48-202ENST00000374730 CDR1P51861 262 aa6.28□□□□□ -1.4
USP48-202ENST00000374730 ZNF143P52747 638 aaPredicted RBP6.28□□□□□ -1.4
USP48-202ENST00000374730 EPHB3P54753 998 aa6.28□□□□□ -1.4
USP48-202ENST00000374730 PLEKHN1Q494U1 663 aaPredicted RBP6.28□□□□□ -1.4
USP48-202ENST00000374730 LCE4AQ5TA78 99 aa6.28□□□□□ -1.4
USP48-202ENST00000374730 TCERG1LQ5VWI1 586 aa6.28□□□□□ -1.4
USP48-202ENST00000374730 VHLLQ6RSH7 139 aa6.28□□□□□ -1.4
USP48-202ENST00000374730 RPTNQ6XPR3 784 aa6.28□□□□□ -1.4
USP48-202ENST00000374730 TMC6Q7Z403 805 aa6.28□□□□□ -1.4
USP48-202ENST00000374730 ADAT2Q7Z6V5 191 aaKnown RBP6.28□□□□□ -1.4
USP48-202ENST00000374730 FAM169BQ8N8A8 192 aa6.28□□□□□ -1.4
USP48-202ENST00000374730 MZB1Q8WU39 189 aa6.28□□□□□ -1.4
USP48-202ENST00000374730 FGD4Q96M96 766 aa6.28□□□□□ -1.4
USP48-202ENST00000374730 SUSD2Q9UGT4 822 aa6.28□□□□□ -1.4
USP48-202ENST00000374730 PREX1Q8TCU6 1659 aa6.28□□□□□ -1.4
USP48-202ENST00000374730 NEXMIFQ5QGS0 1516 aa6.28□□□□□ -1.4
USP48-202ENST00000374730 MYO5BQ9ULV0 1848 aa6.27□□□□□ -1.41
USP48-202ENST00000374730 DBHP09172 617 aa6.27□□□□□ -1.41
USP48-202ENST00000374730 PI3P19957 117 aa6.27□□□□□ -1.41
USP48-202ENST00000374730 L1CAMP32004 1257 aa6.27□□□□□ -1.41
USP48-202ENST00000374730 IRX6P78412 446 aaPredicted RBP6.27□□□□□ -1.41
USP48-202ENST00000374730 AMPD2Q01433 879 aa6.27□□□□□ -1.41
USP48-202ENST00000374730 KIAA1211LQ6NV74 962 aa6.27□□□□□ -1.41
USP48-202ENST00000374730 ZC3H14Q6PJT7 736 aaKnown RBP6.27□□□□□ -1.41
USP48-202ENST00000374730 PAQR3Q6TCH7 311 aa6.27□□□□□ -1.41
USP48-202ENST00000374730 LDHDQ86WU2 507 aa6.27□□□□□ -1.41
USP48-202ENST00000374730 MCMBPQ9BTE3 642 aa6.27□□□□□ -1.41
USP48-202ENST00000374730 BACE2Q9Y5Z0 518 aa6.27□□□□□ -1.41
USP48-202ENST00000374730 DIP2BQ9P265 1576 aa6.27□□□□□ -1.41
USP48-202ENST00000374730 RPGRIP1LQ68CZ1 1315 aa6.26□□□□□ -1.41
USP48-202ENST00000374730 TRBV23OR9-2A0A075B6M9 112 aa6.26□□□□□ -1.41
USP48-202ENST00000374730 STXBP3O00186 592 aa6.26□□□□□ -1.41
USP48-202ENST00000374730 IGSF3O75054 1194 aa6.26□□□□□ -1.41
USP48-202ENST00000374730 NCAPHQ15003 741 aa6.26□□□□□ -1.41
USP48-202ENST00000374730 TTLL10Q6ZVT0 673 aa6.26□□□□□ -1.41
USP48-202ENST00000374730 IGDCC3Q8IVU1 814 aa6.26□□□□□ -1.41
USP48-202ENST00000374730 CRACR2BQ8N4Y2 399 aaPredicted RBP6.26□□□□□ -1.41
USP48-202ENST00000374730 ZNF513Q8N8E2 541 aaPredicted RBP6.26□□□□□ -1.41
USP48-202ENST00000374730 CAPN10Q9HC96 672 aa6.26□□□□□ -1.41
USP48-202ENST00000374730 SUGT1Q9Y2Z0 365 aa6.26□□□□□ -1.41
USP48-202ENST00000374730 PCDHA5Q9Y5H7 936 aa6.26□□□□□ -1.41
USP48-202ENST00000374730 ADGRF5Q8IZF2 1346 aa6.25□□□□□ -1.41
USP48-202ENST00000374730 IRS2Q9Y4H2 1338 aa6.25□□□□□ -1.41
USP48-202ENST00000374730 ZFYVE9O95405 1425 aa6.25□□□□□ -1.41
USP48-202ENST00000374730 TMEM131LA2VDJ0 1609 aa6.25□□□□□ -1.41
USP48-202ENST00000374730 A0A1W2PQJ5 194 aa6.25□□□□□ -1.41
USP48-202ENST00000374730 C2orf71A6NGG8 1288 aa6.25□□□□□ -1.41
USP48-202ENST00000374730 ERCC5P28715 1186 aaPredicted RBP6.25□□□□□ -1.41
USP48-202ENST00000374730 SEPHS1P49903 392 aa6.25□□□□□ -1.41
USP48-202ENST00000374730 CNGB1Q14028 1251 aaPredicted RBP6.25□□□□□ -1.41
USP48-202ENST00000374730 CC2D1BQ5T0F9 858 aaKnown RBP6.25□□□□□ -1.41
USP48-202ENST00000374730 BICRALQ6AI39 1079 aa6.25□□□□□ -1.41
USP48-202ENST00000374730 POMZP3Q6PJE2 187 aa6.25□□□□□ -1.41
USP48-202ENST00000374730 DACT3Q96B18 629 aaPredicted RBP6.25□□□□□ -1.41
USP48-202ENST00000374730 ANAPC16Q96DE5 110 aa6.25□□□□□ -1.41
USP48-202ENST00000374730 KNSTRNQ9Y448 316 aa6.25□□□□□ -1.41
USP48-202ENST00000374730 CLTCQ00610 1675 aaKnown RBP6.25□□□□□ -1.41
USP48-202ENST00000374730 SHPRHQ149N8 1683 aa6.24□□□□□ -1.41
USP48-202ENST00000374730 VAMP4O75379 141 aa6.24□□□□□ -1.41
USP48-202ENST00000374730 TCF3P15923 654 aa6.24□□□□□ -1.41
USP48-202ENST00000374730 PPP2R1AP30153 589 aa6.24□□□□□ -1.41
USP48-202ENST00000374730 DPY19L1Q2PZI1 675 aa6.24□□□□□ -1.41
USP48-202ENST00000374730 TNNI3KQ59H18 835 aa6.24□□□□□ -1.41
USP48-202ENST00000374730 VPS37DQ86XT2 251 aa6.24□□□□□ -1.41
USP48-202ENST00000374730 TMEFF1Q8IYR6 380 aa6.24□□□□□ -1.41
USP48-202ENST00000374730 APBA2Q99767 749 aa6.24□□□□□ -1.41
USP48-202ENST00000374730 EPB41L4AQ9HCS5 686 aaPredicted RBP6.24□□□□□ -1.41
USP48-202ENST00000374730 APEX2Q9UBZ4 518 aa6.24□□□□□ -1.41
USP48-202ENST00000374730 AKT3Q9Y243 479 aa6.24□□□□□ -1.41
USP48-202ENST00000374730 EMC9Q9Y3B6 208 aa6.24□□□□□ -1.41
USP48-202ENST00000374730 ANKRD26Q9UPS8 1709 aa6.24□□□□□ -1.41
USP48-202ENST00000374730 AGLP35573 1532 aa6.24□□□□□ -1.41
USP48-202ENST00000374730 INHBBP09529 407 aa6.23□□□□□ -1.41
USP48-202ENST00000374730 PAMP19021 973 aa6.23□□□□□ -1.41
USP48-202ENST00000374730 IGFBP6P24592 240 aaPredicted RBP6.23□□□□□ -1.41
USP48-202ENST00000374730 AFF3P51826 1226 aaKnown RBP6.23□□□□□ -1.41
USP48-202ENST00000374730 RRP1P56182 461 aaKnown RBP6.23□□□□□ -1.41
USP48-202ENST00000374730 CAP1Q01518 475 aa6.23□□□□□ -1.41
USP48-202ENST00000374730 GNL2Q13823 731 aaKnown RBP6.23□□□□□ -1.41
USP48-202ENST00000374730 CABP7Q86V35 215 aa6.23□□□□□ -1.41
USP48-202ENST00000374730 FAM129CQ86XR2 697 aa6.23□□□□□ -1.41
USP48-202ENST00000374730 BVESQ8NE79 360 aa6.23□□□□□ -1.41
USP48-202ENST00000374730 C14orf93Q9H972 538 aaKnown RBP6.23□□□□□ -1.41
USP48-202ENST00000374730 TULP4Q9NRJ4 1543 aa6.23□□□□□ -1.41
USP48-202ENST00000374730 CENPJQ9HC77 1338 aaPredicted RBP6.23□□□□□ -1.41
USP48-202ENST00000374730 FANCIQ9NVI1 1328 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 179.5 ms